RNA–Protein interactions for RNA: ENST00000472548.5

ITSN1-225, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 529 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-225ENST00000472548 A0A1B0GV50 99 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 SCGB1D1O95968 90 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 IFNA1P01562 189 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 MGPP08493 103 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 MAJINQ3KP22 176 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 HIGD2BQ4VC39 106 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 WDR73Q6P4I2 378 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 FAM213BQ8TBF2 198 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 GTSF1Q8WW33 167 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
ITSN1-225ENST00000472548 LPAP08519 4548 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 IGKV3OR2-268A0A0C4DH90 116 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 PRSS47A8MTI9 375 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 GAS8-AS1O95177 125 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 SMIM17P0DL12 118 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
ITSN1-225ENST00000472548 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 COX19Q49B96 90 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 TEX43Q6ZNM6 134 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 LINC01551Q86U37 167 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 STPG4Q8N801 248 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 PGLYRP4Q96LB8 373 aa4.27□□□□□ -1.73
ITSN1-225ENST00000472548 ALKBH7Q9BT30 221 aaPredicted RBP4.27□□□□□ -1.73
ITSN1-225ENST00000472548 C19orf71A6NCJ1 209 aa4.26□□□□□ -1.73
ITSN1-225ENST00000472548 RASL11AQ6T310 242 aa4.26□□□□□ -1.73
ITSN1-225ENST00000472548 FER1L6-AS1Q8NA97 138 aa4.26□□□□□ -1.73
ITSN1-225ENST00000472548 SMIM12Q96EX1 92 aa4.26□□□□□ -1.73
ITSN1-225ENST00000472548 LINC00526Q96FQ7 95 aa4.26□□□□□ -1.73
ITSN1-225ENST00000472548 TPPP3Q9BW30 176 aa4.26□□□□□ -1.73
ITSN1-225ENST00000472548 DPH3P1Q9H4G8 78 aa4.26□□□□□ -1.73
ITSN1-225ENST00000472548 TRBV20OR9-2A0A075B6H5 130 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 TRAV9-1A0A075B6T8 112 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 GVQW2A0A096LPI5 108 aaPredicted RBP4.25□□□□□ -1.73
ITSN1-225ENST00000472548 TMEM238C9JI98 176 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 H7C1H1 209 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 CCL25O15444 150 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 NTF3P20783 257 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 CCL20P78556 96 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 LYZL1Q6UWQ5 148 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 CHCHD10Q8WYQ3 142 aaPredicted RBP4.25□□□□□ -1.73
ITSN1-225ENST00000472548 NAT8Q9UHE5 227 aa4.25□□□□□ -1.73
ITSN1-225ENST00000472548 TRAV26-2A0A0B4J265 109 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 UBE2L6O14933 153 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 BCL2P10415 239 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 ESDP10768 282 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 AMTP48728 403 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 CENPWQ5EE01 88 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 GATD1Q8NB37 220 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 C11orf52Q96A22 123 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 VAMP8Q9BV40 100 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 UQCR10Q9UDW1 63 aa4.24□□□□□ -1.73
ITSN1-225ENST00000472548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.23□□□□□ -1.73
ITSN1-225ENST00000472548 IGKV2-29A2NJV5 120 aaPredicted RBP4.23□□□□□ -1.73
ITSN1-225ENST00000472548 FAM231BA6NCW3 169 aa4.23□□□□□ -1.73
ITSN1-225ENST00000472548 FOXA3P55318 350 aaPredicted RBP4.23□□□□□ -1.73
ITSN1-225ENST00000472548 CACNG7P62955 275 aa4.23□□□□□ -1.73
ITSN1-225ENST00000472548 BATFQ16520 125 aa4.23□□□□□ -1.73
ITSN1-225ENST00000472548 CFAP161Q6P656 301 aa4.23□□□□□ -1.73
ITSN1-225ENST00000472548 RPL39LQ96EH5 51 aaKnown RBP4.23□□□□□ -1.73
ITSN1-225ENST00000472548 VPS25Q9BRG1 176 aa4.23□□□□□ -1.73
ITSN1-225ENST00000472548 F2Z2F3 143 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 K7ERU9 68 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 FGF6P10767 208 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 CTRLP40313 264 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 REG3GQ6UW15 175 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 Q6ZRP5 223 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 GNG13Q9P2W3 67 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 LAMTOR2Q9Y2Q5 125 aa4.22□□□□□ -1.73
ITSN1-225ENST00000472548 LINC00959A0A1B0GUT2 108 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 A0A1W2PNN7 141 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 TMEM250H0YL14 139 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 XCL1P47992 114 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 RPL23P62829 140 aaKnown RBP4.21□□□□□ -1.74
ITSN1-225ENST00000472548 OCIAD2Q56VL3 154 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 AMMECR1LQ6DCA0 310 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 RNASEKQ6P5S7 137 aaKnown RBP4.21□□□□□ -1.74
ITSN1-225ENST00000472548 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 CNFNQ9BYD5 112 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 CST9LQ9H4G1 147 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 SPANXA1Q9NS26 97 aa4.21□□□□□ -1.74
ITSN1-225ENST00000472548 SDHAF1A6NFY7 115 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 SCGB1A1P11684 91 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 GNG4P50150 75 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 ADIRFQ15847 76 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 PMCHL1Q16048 86 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 SPATA45Q537H7 98 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 SMIM7Q9BQ49 75 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 MANBALQ9NQG1 85 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 LINC00474Q9P2X8 69 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 PAM16Q9Y3D7 125 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 TRAPPC1Q9Y5R8 145 aa4.2□□□□□ -1.74
ITSN1-225ENST00000472548 IGHV1-58A0A0C4DH39 117 aa4.19□□□□□ -1.74
ITSN1-225ENST00000472548 H7C423 109 aa4.19□□□□□ -1.74
ITSN1-225ENST00000472548 K7EN84 100 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms