RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 DEFB104AQ8WTQ1 72 aa5.51□□□□□ -1.53
TSPAN1-205ENST00000472170 TRAPPC1Q9Y5R8 145 aa5.51□□□□□ -1.53
TSPAN1-205ENST00000472170 V9GYV3 84 aa5.51□□□□□ -1.53
TSPAN1-205ENST00000472170 PKD1P98161 4303 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 TSPAN13O95857 204 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 SMR3BP02814 79 aaPredicted RBP5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 MT-ND6P03923 174 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 INAFM2P0DMQ5 153 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 FGF6P10767 208 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 LINC00310P59036 64 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 AMN1Q8IY45 258 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 C20orf203Q8NBC4 194 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 DNAH11Q96DT5 4516 aa5.5□□□□□ -1.53
TSPAN1-205ENST00000472170 IGLV4-60A0A075B6I1 120 aa5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 SMIM27A0A1W2PRY6 76 aa5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 HINT1P49773 126 aaPredicted RBP5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 SUMO2P61956 95 aaKnown RBP5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 HBBP68871 147 aa5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 WFDC2Q14508 124 aa5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 Q5VSD8 79 aa5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 SIGMAR1Q99720 223 aa5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 PKIGQ9Y2B9 76 aa5.49□□□□□ -1.53
TSPAN1-205ENST00000472170 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 TRBV27A0A0K0K1C4 114 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 IGKV2-29A2NJV5 120 aaPredicted RBP5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 GAGE12HA6NDE8 117 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 NUPR1O60356 82 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 SERF1AO75920 110 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 SEC11AP67812 179 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 FAM104BQ5XKR9 115 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 PMCHL2Q9BQD1 86 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 C20orf78Q9BR46 151 aa5.48□□□□□ -1.53
TSPAN1-205ENST00000472170 IGHV3-64A0A075B6Q5 118 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 PRSS1P07477 247 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 POLR2KP53803 58 aaKnown RBP5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 CKS1BP61024 79 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 BVES-AS1Q5T3Y7 98 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 ATP5L2Q7Z4Y8 100 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 C9orf163Q8N9P6 203 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 CHCHD10Q8WYQ3 142 aaPredicted RBP5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 RNF185Q96GF1 192 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 CHAC1Q9BUX1 264 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 SPANXA1Q9NS26 97 aa5.47□□□□□ -1.53
TSPAN1-205ENST00000472170 J3QR89 54 aa5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 K7EP34 96 aa5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 TSHBP01222 138 aa5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 MALP21145 153 aa5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 LINC01620Q4KN68 170 aa5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 MRPL51Q4U2R6 128 aaKnown RBP5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 GNB1LQ9BYB4 327 aa5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
TSPAN1-205ENST00000472170 GAGE10A6NGK3 116 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 SMKR1H3BMG3 65 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 ZNF561-AS1K7EIQ3 104 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 TNFRSF6BO95407 300 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 XCL1P47992 114 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 KRTDAPP60985 99 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 HSD52Q0P140 79 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 TMEM136Q6ZRR5 245 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 Q6ZSA8 131 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 BAGE3Q86Y29 109 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 ORMDL3Q8N138 153 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 CSDC2Q9Y534 153 aaKnown RBP5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 DYNC1H1Q14204 4646 aaKnown RBP5.45□□□□□ -1.54
TSPAN1-205ENST00000472170 IGHV1-58A0A0C4DH39 117 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 LINC00959A0A1B0GUT2 108 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 A6NDN8 102 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 D6R8Y8 96 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 H3BRM9 83 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 APOMO95445 188 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 RPL32P62910 135 aaKnown RBP5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 HAMPP81172 84 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 CD164L2Q6UWJ8 174 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 FA2HQ7L5A8 372 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 LINC00528Q8N1L1 170 aa5.44□□□□□ -1.54
TSPAN1-205ENST00000472170 C9orf118A6NHY6 69 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 ODF1Q14990 250 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 SLC25A34Q6PIV7 304 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 Q6ZVH6 145 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 SCXQ7RTU7 201 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 NRACQ8N912 160 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 PRELID3AQ96N28 172 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 TIMM21Q9BVV7 248 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 HERC1Q15751 4861 aa5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 SRRM2Q9UQ35 2752 aaKnown RBP5.43□□□□□ -1.54
TSPAN1-205ENST00000472170 DMBT1Q9UGM3 2413 aaPredicted RBP5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 COX7A2LO14548 114 aa5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 GAS8-AS1O95177 125 aa5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 IFI27P40305 119 aaPredicted RBP5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 CIRBP-AS1Q8TBR5 109 aa5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 SMIM2Q9BVW6 85 aa5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 MAP1LC3AQ9H492 121 aa5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 GEMIN7Q9H840 131 aaKnown RBP5.42□□□□□ -1.54
TSPAN1-205ENST00000472170 GVQW2A0A096LPI5 108 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms