RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 SUMO2P61956 95 aaKnown RBP11.62□□□□□ -0.55
CCDC78-208ENST00000471861 TMEM241Q24JQ0 296 aa11.62□□□□□ -0.55
CCDC78-208ENST00000471861 CT83Q5H943 113 aa11.62□□□□□ -0.55
CCDC78-208ENST00000471861 A0A1B0GUT8 65 aa11.61□□□□□ -0.55
CCDC78-208ENST00000471861 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
CCDC78-208ENST00000471861 HIGD1CA8MV81 97 aa11.6□□□□□ -0.55
CCDC78-208ENST00000471861 KIAA0087Q14695 138 aa11.6□□□□□ -0.55
CCDC78-208ENST00000471861 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
CCDC78-208ENST00000471861 BORCS7Q96B45 105 aa11.59□□□□□ -0.55
CCDC78-208ENST00000471861 KIR2DL4Q99706 377 aa11.59□□□□□ -0.55
CCDC78-208ENST00000471861 RETNLBQ9BQ08 111 aa11.57□□□□□ -0.56
CCDC78-208ENST00000471861 TAGLN2P37802 199 aaKnown RBP11.56□□□□□ -0.56
CCDC78-208ENST00000471861 C2orf82Q6UX34 121 aa11.56□□□□□ -0.56
CCDC78-208ENST00000471861 NDUFC2-KCTD14E9PQ53 114 aa11.55□□□□□ -0.56
CCDC78-208ENST00000471861 TMEM18Q96B42 140 aa11.55□□□□□ -0.56
CCDC78-208ENST00000471861 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
CCDC78-208ENST00000471861 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
CCDC78-208ENST00000471861 PPP1R17O96001 155 aa11.53□□□□□ -0.56
CCDC78-208ENST00000471861 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
CCDC78-208ENST00000471861 CTDSP1Q9GZU7 261 aa11.53□□□□□ -0.56
CCDC78-208ENST00000471861 TMEM250H0YL14 139 aa11.52□□□□□ -0.57
CCDC78-208ENST00000471861 PPP1R2P9O14990 202 aa11.52□□□□□ -0.57
CCDC78-208ENST00000471861 NUPR1O60356 82 aa11.52□□□□□ -0.57
CCDC78-208ENST00000471861 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
CCDC78-208ENST00000471861 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
CCDC78-208ENST00000471861 CRYGAP11844 174 aa11.51□□□□□ -0.57
CCDC78-208ENST00000471861 HBBP68871 147 aa11.51□□□□□ -0.57
CCDC78-208ENST00000471861 TPRXLQ17RH7 258 aa11.51□□□□□ -0.57
CCDC78-208ENST00000471861 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
CCDC78-208ENST00000471861 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
CCDC78-208ENST00000471861 ANAPC11Q9NYG5 84 aa11.5□□□□□ -0.57
CCDC78-208ENST00000471861 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
CCDC78-208ENST00000471861 TGIF2-C20orf24A0A0A6YYL0 155 aa11.49□□□□□ -0.57
CCDC78-208ENST00000471861 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
CCDC78-208ENST00000471861 LINC01551Q86U37 167 aa11.49□□□□□ -0.57
CCDC78-208ENST00000471861 CDIP1Q9H305 208 aa11.49□□□□□ -0.57
CCDC78-208ENST00000471861 LINC00242Q5T6M2 205 aa11.48□□□□□ -0.57
CCDC78-208ENST00000471861 C20orf78Q9BR46 151 aa11.48□□□□□ -0.57
CCDC78-208ENST00000471861 FSIP2Q5CZC0 6907 aa11.48□□□□□ -0.57
CCDC78-208ENST00000471861 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
CCDC78-208ENST00000471861 CEBPGP53567 150 aa11.47□□□□□ -0.57
CCDC78-208ENST00000471861 RIGQ13278 110 aa11.47□□□□□ -0.57
CCDC78-208ENST00000471861 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
CCDC78-208ENST00000471861 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
CCDC78-208ENST00000471861 LINC00469Q8N7U9 141 aa11.47□□□□□ -0.57
CCDC78-208ENST00000471861 PACRGQ96M98 296 aaPredicted RBP11.47□□□□□ -0.57
CCDC78-208ENST00000471861 V9GYV3 84 aa11.47□□□□□ -0.57
CCDC78-208ENST00000471861 SMIM2Q9BVW6 85 aa11.46□□□□□ -0.57
CCDC78-208ENST00000471861 OSTCQ9NRP0 149 aa11.46□□□□□ -0.57
CCDC78-208ENST00000471861 BCE1O60756 84 aa11.45□□□□□ -0.58
CCDC78-208ENST00000471861 RPL28P46779 137 aaKnown RBP11.45□□□□□ -0.58
CCDC78-208ENST00000471861 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
CCDC78-208ENST00000471861 ZNF727A8MUV8 499 aa11.43□□□□□ -0.58
CCDC78-208ENST00000471861 TCAPO15273 167 aa11.43□□□□□ -0.58
CCDC78-208ENST00000471861 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
CCDC78-208ENST00000471861 SMIM7Q9BQ49 75 aa11.43□□□□□ -0.58
CCDC78-208ENST00000471861 CRCT1Q9UGL9 99 aa11.43□□□□□ -0.58
CCDC78-208ENST00000471861 IGLV7-46A0A075B6I9 117 aa11.42□□□□□ -0.58
CCDC78-208ENST00000471861 IGLV4-3A0A075B6K6 122 aa11.42□□□□□ -0.58
CCDC78-208ENST00000471861 LINC00862A6NCI5 91 aa11.42□□□□□ -0.58
CCDC78-208ENST00000471861 LBHQ53QV2 105 aaPredicted RBP11.42□□□□□ -0.58
CCDC78-208ENST00000471861 SLC51BQ86UW2 128 aa11.42□□□□□ -0.58
CCDC78-208ENST00000471861 CKS2P33552 79 aa11.41□□□□□ -0.58
CCDC78-208ENST00000471861 MRPL55Q7Z7F7 128 aaKnown RBP11.41□□□□□ -0.58
CCDC78-208ENST00000471861 LINC00304Q8N9R0 145 aa11.41□□□□□ -0.58
CCDC78-208ENST00000471861 NPYP01303 97 aa11.4□□□□□ -0.58
CCDC78-208ENST00000471861 TP73-AS1Q9UF72 201 aa11.4□□□□□ -0.58
CCDC78-208ENST00000471861 LINC00173Q6ZV60 143 aa11.39□□□□□ -0.59
CCDC78-208ENST00000471861 KRTAP13-1Q8IUC0 172 aa11.39□□□□□ -0.59
CCDC78-208ENST00000471861 LINC01561Q8N1V8 128 aa11.39□□□□□ -0.59
CCDC78-208ENST00000471861 NAT8BQ9UHF3 227 aa11.39□□□□□ -0.59
CCDC78-208ENST00000471861 D6R8Y8 96 aa11.38□□□□□ -0.59
CCDC78-208ENST00000471861 IFI27P40305 119 aaPredicted RBP11.38□□□□□ -0.59
CCDC78-208ENST00000471861 TCTE3Q8IZS6 198 aa11.38□□□□□ -0.59
CCDC78-208ENST00000471861 ZC2HC1BQ5TFG8 222 aa11.37□□□□□ -0.59
CCDC78-208ENST00000471861 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
CCDC78-208ENST00000471861 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
CCDC78-208ENST00000471861 FAM74A3Q4VXF1 159 aa11.36□□□□□ -0.59
CCDC78-208ENST00000471861 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
CCDC78-208ENST00000471861 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
CCDC78-208ENST00000471861 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
CCDC78-208ENST00000471861 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
CCDC78-208ENST00000471861 CKS1BP61024 79 aa11.34□□□□□ -0.59
CCDC78-208ENST00000471861 Q8IZM0 81 aa11.34□□□□□ -0.59
CCDC78-208ENST00000471861 EIF5A2Q9GZV4 153 aaKnown RBP11.34□□□□□ -0.59
CCDC78-208ENST00000471861 PPDPFQ9H3Y8 114 aa11.34□□□□□ -0.59
CCDC78-208ENST00000471861 SMIM27A0A1W2PRY6 76 aa11.33□□□□□ -0.6
CCDC78-208ENST00000471861 PRSS2P07478 247 aa11.33□□□□□ -0.6
CCDC78-208ENST00000471861 ALKAL2Q6UX46 152 aa11.33□□□□□ -0.6
CCDC78-208ENST00000471861 KRTAP4-1Q9BYQ7 146 aa11.33□□□□□ -0.6
CCDC78-208ENST00000471861 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
CCDC78-208ENST00000471861 BLOC1S1P78537 153 aa11.32□□□□□ -0.6
CCDC78-208ENST00000471861 Q6ZN92 141 aa11.32□□□□□ -0.6
CCDC78-208ENST00000471861 TEX43Q6ZNM6 134 aa11.32□□□□□ -0.6
CCDC78-208ENST00000471861 hCG_2014768A0A024R1R8 64 aa11.31□□□□□ -0.6
CCDC78-208ENST00000471861 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
CCDC78-208ENST00000471861 C6orf226Q5I0X4 101 aa11.31□□□□□ -0.6
CCDC78-208ENST00000471861 A0A1B0GW15 77 aa11.3□□□□□ -0.6
CCDC78-208ENST00000471861 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
CCDC78-208ENST00000471861 AKAP14Q86UN6 197 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms