RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 NOP10Q9NPE3 64 aaKnown RBP3.03□□□□□ -1.92
CCDC39-202ENST00000471307 TRAPPC1Q9Y5R8 145 aa3.03□□□□□ -1.92
CCDC39-202ENST00000471307 TRGV1A0A0A0MS02 117 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 NDUFC2-KCTD14E9PQ53 114 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 APCSP02743 223 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 PPBPP02775 128 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 CRYGDP07320 174 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 SPART-AS1P0CW21 52 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 EVI2AP22794 236 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 FABP9Q0Z7S8 132 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 FAM104BQ5XKR9 115 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 Q8NAQ8 132 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 C18orf15Q96N68 181 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 AP1S3Q96PC3 154 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 C11orf68Q9H3H3 251 aaKnown RBP3.02□□□□□ -1.93
CCDC39-202ENST00000471307 DPH3P1Q9H4G8 78 aa3.02□□□□□ -1.93
CCDC39-202ENST00000471307 DNHD1Q96M86 4753 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 TRGV2A0A075B6R0 118 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 TRAV4A0A0B4J268 109 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 PPP1R17O96001 155 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 TRGC2P03986 189 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 EMP1P54849 157 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 DEFA6Q01524 100 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 MPV17L2Q567V2 206 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 FAM222AQ5U5X8 452 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 CFAP126Q5VTH2 177 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 Q6ZTI0 123 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 PCP2Q8IVA1 136 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.01□□□□□ -1.93
CCDC39-202ENST00000471307 MRPL16Q9NX20 251 aaKnown RBP3.01□□□□□ -1.93
CCDC39-202ENST00000471307 MEGF8Q7Z7M0 2845 aa3.01□□□□□ -1.93
CCDC39-202ENST00000471307 TENM3Q9P273 2699 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 A0A096LNJ9 63 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 C1orf196B1AJZ1 125 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 F5H768 121 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 DEFB4AO15263 64 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 DEFB130BP0DP73 79 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 DEFB130AP0DP74 79 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 CKS2P33552 79 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 DAD1P61803 113 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 MRPL51Q4U2R6 128 aaKnown RBP3□□□□□ -1.93
CCDC39-202ENST00000471307 FAM74A4Q5TZK3 123 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 AMN1Q8IY45 258 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 ORMDL3Q8N138 153 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 ORAOV1Q8WV07 137 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 PACRGQ96M98 296 aaPredicted RBP3□□□□□ -1.93
CCDC39-202ENST00000471307 SAMD10Q9BYL1 202 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 LAMTOR2Q9Y2Q5 125 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 U3KQK5 164 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 COL7A1Q02388 2944 aa3□□□□□ -1.93
CCDC39-202ENST00000471307 IGHV6-1A0A0B4J1U7 121 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 TRGV4A0A0C4DH28 118 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 TRBV6-4A0A1B0GX49 114 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 D6R8Y8 96 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 M0QY20 66 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 IGHV3-53P01767 116 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 ATP5G1P05496 136 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 MGPP08493 103 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 SRIP30626 198 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 RAB5BP61020 215 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 ZNF56Q15929 161 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 PRELID3AQ96N28 172 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 C20orf78Q9BR46 151 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 NIT2Q9NQR4 276 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 PRO0255Q9UI72 69 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 HHLA3Q9XRX5 114 aa2.99□□□□□ -1.93
CCDC39-202ENST00000471307 IGHV3-73A0A0B4J1V6 119 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 TRAV26-2A0A0B4J265 109 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 TRBV6-5A0A0K0K1A5 114 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 H3BNG1 76 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 K7EMI3 77 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BKO60814 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BJP06899 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 SCGB1C2P0DMR2 95 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BOP23527 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BBP33778 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BDP58876 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BCP62807 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 Q0VG73 95 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST2H2BEQ16778 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 C12orf74Q32Q52 190 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.98□□□□□ -1.93
CCDC39-202ENST00000471307 CEMP1Q6PRD7 247 aaPredicted RBP2.98□□□□□ -1.93
CCDC39-202ENST00000471307 SLC25A29Q8N8R3 303 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BHQ93079 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BNQ99877 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 HIST1H2BMQ99879 126 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 PRADC1Q9BSG0 188 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 MAP1LC3AQ9H492 121 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 ST20Q9HBF5 79 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 NXT2Q9NPJ8 142 aaKnown RBP2.98□□□□□ -1.93
CCDC39-202ENST00000471307 STAB2Q8WWQ8 2551 aa2.98□□□□□ -1.93
CCDC39-202ENST00000471307 TRBV7-3A0A075B6L6 115 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 TRBV27A0A0K0K1C4 114 aa2.97□□□□□ -1.93
CCDC39-202ENST00000471307 LOC389332A0A1B0GUA5 103 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms