RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PAM16Q9Y3D7 125 aa6.62□□□□□ -1.35
CCM2-204ENST00000470837 hDV102S1A0JD36 115 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 IBA57-AS1B1ANH7 110 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 COX7A2LO14548 114 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
CCM2-204ENST00000470837 SPATA45Q537H7 98 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 ENHOQ6UWT2 76 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 STPG4Q8N801 248 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 Q9HAA7 133 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
CCM2-204ENST00000470837 IGKV2D-24A0A075B6R9 120 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 APOMO95445 188 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 LY6G6CO95867 125 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 NMUP48645 174 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 LINC00518Q8N0U6 118 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 TM2D2Q9BX73 214 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
CCM2-204ENST00000470837 IGLV5-45A0A087WSX0 123 aa6.59□□□□□ -1.35
CCM2-204ENST00000470837 TMEM223A0PJW6 202 aa6.59□□□□□ -1.35
CCM2-204ENST00000470837 PRSS2P07478 247 aa6.59□□□□□ -1.35
CCM2-204ENST00000470837 SPINK8P0C7L1 97 aa6.59□□□□□ -1.35
CCM2-204ENST00000470837 LGALS3P17931 250 aaKnown RBP6.59□□□□□ -1.35
CCM2-204ENST00000470837 COX6A2Q02221 97 aa6.59□□□□□ -1.35
CCM2-204ENST00000470837 C5orf38Q86SI9 138 aa6.59□□□□□ -1.35
CCM2-204ENST00000470837 PLEKHB2Q96CS7 222 aa6.59□□□□□ -1.35
CCM2-204ENST00000470837 IGHV3-64A0A075B6Q5 118 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 A0A087WZ39 114 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 IGHV3OR16-9A0A0B4J2B5 98 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 E9PLD3 99 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 TSTD3H0UI37 97 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 PSCAO43653 123 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 CDPF1Q6NVV7 123 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 CFAP161Q6P656 301 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 LINC01561Q8N1V8 128 aa6.58□□□□□ -1.36
CCM2-204ENST00000470837 TGP01266 2768 aa6.57□□□□□ -1.36
CCM2-204ENST00000470837 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
CCM2-204ENST00000470837 LEPROTO15243 131 aa6.57□□□□□ -1.36
CCM2-204ENST00000470837 J3QQQ9 107 aa6.56□□□□□ -1.36
CCM2-204ENST00000470837 FOXI1Q12951 378 aa6.56□□□□□ -1.36
CCM2-204ENST00000470837 ANKRD39Q53RE8 183 aa6.56□□□□□ -1.36
CCM2-204ENST00000470837 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
CCM2-204ENST00000470837 TOMM7Q9P0U1 55 aa6.56□□□□□ -1.36
CCM2-204ENST00000470837 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 M0R2N4 97 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 C6orf226Q5I0X4 101 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 SFTA2Q6UW10 78 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 ORAOV1Q8WV07 137 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 C14orf144Q96I85 54 aa6.55□□□□□ -1.36
CCM2-204ENST00000470837 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
CCM2-204ENST00000470837 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
CCM2-204ENST00000470837 COX8AP10176 69 aa6.54□□□□□ -1.36
CCM2-204ENST00000470837 CKS1BP61024 79 aa6.54□□□□□ -1.36
CCM2-204ENST00000470837 SCGB1D4Q6XE38 83 aa6.54□□□□□ -1.36
CCM2-204ENST00000470837 PRO1933Q9H354 126 aa6.54□□□□□ -1.36
CCM2-204ENST00000470837 UQCR10Q9UDW1 63 aa6.54□□□□□ -1.36
CCM2-204ENST00000470837 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
CCM2-204ENST00000470837 MYMXA0A1B0GTQ4 84 aa6.53□□□□□ -1.36
CCM2-204ENST00000470837 CXCL5P42830 114 aa6.53□□□□□ -1.36
CCM2-204ENST00000470837 Q8IZM0 81 aa6.53□□□□□ -1.36
CCM2-204ENST00000470837 NDUFA12Q9UI09 145 aa6.53□□□□□ -1.36
CCM2-204ENST00000470837 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
CCM2-204ENST00000470837 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
CCM2-204ENST00000470837 LINC00587B1AMM8 73 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 DLEU1O43261 78 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 HERV-K104P63124 156 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
CCM2-204ENST00000470837 C14orf177Q52M58 125 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 C6orf223Q8N319 242 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 MIEN1Q9BRT3 115 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 KRTAP1-5Q9BYS1 174 aa6.51□□□□□ -1.37
CCM2-204ENST00000470837 NDUFA1O15239 70 aa6.5□□□□□ -1.37
CCM2-204ENST00000470837 HNRNPA3P51991 378 aaKnown RBP6.5□□□□□ -1.37
CCM2-204ENST00000470837 HIGD2BQ4VC39 106 aa6.5□□□□□ -1.37
CCM2-204ENST00000470837 C1orf134Q5TEV5 83 aa6.5□□□□□ -1.37
CCM2-204ENST00000470837 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
CCM2-204ENST00000470837 BOD1L2Q8IYS8 172 aa6.5□□□□□ -1.37
CCM2-204ENST00000470837 TENM2Q9NT68 2774 aa6.49□□□□□ -1.37
CCM2-204ENST00000470837 USP17L23D6RBM5 183 aa6.49□□□□□ -1.37
CCM2-204ENST00000470837 F8WDY8 70 aa6.49□□□□□ -1.37
CCM2-204ENST00000470837 TSPEAR-AS2P59090 65 aa6.49□□□□□ -1.37
CCM2-204ENST00000470837 MEIG1Q5JSS6 88 aa6.49□□□□□ -1.37
CCM2-204ENST00000470837 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
CCM2-204ENST00000470837 TTTY13Q9BZ97 58 aa6.49□□□□□ -1.37
CCM2-204ENST00000470837 PCP4L1A6NKN8 68 aa6.48□□□□□ -1.37
CCM2-204ENST00000470837 TMEM238C9JI98 176 aa6.48□□□□□ -1.37
CCM2-204ENST00000470837 GCSHP23434 173 aa6.48□□□□□ -1.37
CCM2-204ENST00000470837 Q6ZR54 194 aa6.48□□□□□ -1.37
CCM2-204ENST00000470837 MAPKAPK5-AS1Q8N8E1 139 aa6.48□□□□□ -1.37
CCM2-204ENST00000470837 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
CCM2-204ENST00000470837 EREGO14944 169 aa6.47□□□□□ -1.37
CCM2-204ENST00000470837 LECT2O14960 151 aa6.47□□□□□ -1.37
CCM2-204ENST00000470837 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
CCM2-204ENST00000470837 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
CCM2-204ENST00000470837 ZNF625Q96I27 306 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms