RNA–Protein interactions for RNA: ENST00000470309.5

KRIT1-220, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 3

Gene KRIT1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-220ENST00000470309 BICRAQ9NZM4 1560 aa-0.83□□□□□ -2.54
KRIT1-220ENST00000470309 SPG11Q96JI7 2443 aa-0.84□□□□□ -2.54
KRIT1-220ENST00000470309 KNL1Q8NG31 2342 aa-0.84□□□□□ -2.54
KRIT1-220ENST00000470309 TRBV7-4A0A0J9YYF1 115 aa-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 LOC285095A0A1B0GVY8 99 aa-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 MIF4GDA9UHW6 222 aaKnown RBP-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 SYS1-DBNDD2H3BUS1 97 aa-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 SPRR2AP35326 72 aa-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 MEIG1Q5JSS6 88 aa-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 C10orf113Q5VZT2 155 aa-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 MRPL54Q6P161 138 aaKnown RBP-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 TMEM263Q8WUH6 116 aaKnown RBP-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 SNRNP25Q9BV90 132 aaKnown RBP-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 TULP4Q9NRJ4 1543 aa-0.85□□□□□ -2.55
KRIT1-220ENST00000470309 LINC00959A0A1B0GUT2 108 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 FAM25AB3EWG3 89 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 FAM25CB3EWG5 89 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 FAM25GB3EWG6 89 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 MGPP08493 103 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 PPP3R2Q96LZ3 170 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 SPANXDQ9BXN6 97 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 RAPGEF6Q8TEU7 1601 aa-0.86□□□□□ -2.55
KRIT1-220ENST00000470309 CPSF1Q10570 1443 aaKnown RBP-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 LOC105371267A0A1B0GV96 52 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 CHKB-CPT1BH3BT56 60 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 IGLC1P0CG04 106 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 UBA52P62987 128 aaKnown RBP-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 FDCSPQ8NFU4 85 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 SPRR4Q96PI1 79 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 NAA60Q9H7X0 242 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 FAIMQ9NVQ4 179 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 LINC00474Q9P2X8 69 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 APLNQ9ULZ1 77 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 MYH7P12883 1935 aa-0.87□□□□□ -2.55
KRIT1-220ENST00000470309 PKD1P98161 4303 aa-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 HMGXB3Q12766 1538 aa-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 GNG7O60262 68 aa-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 COX8AP10176 69 aa-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 CATR1Q13166 79 aa-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 ARL11Q969Q4 196 aa-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 NXT2Q9NPJ8 142 aaKnown RBP-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 USH2AO75445 5202 aa-0.88□□□□□ -2.55
KRIT1-220ENST00000470309 KIAA0556O60303 1618 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 SPRR2EP22531 72 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 DEFB135Q30KP9 77 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 Q56UQ5 140 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 COMMD6Q7Z4G1 85 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 C5orf38Q86SI9 138 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 FAM223AQ8IWN6 122 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 MYOZ3Q8TDC0 251 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 LINC01600Q96MT4 127 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 LINC00470Q9BZP3 86 aa-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 PAIP2BQ9ULR5 123 aaKnown RBP-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 MAGI1Q96QZ7 1491 aaPredicted RBP-0.89□□□□□ -2.55
KRIT1-220ENST00000470309 SPTBN4Q9H254 2564 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 REV3LO60673 3130 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 MYOM1P52179 1685 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 UBR4Q5T4S7 5183 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 SSSCA1O60232 199 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 SELENOWP63302 87 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 C8orf59Q8N0T1 100 aaPredicted RBP-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 LCN9Q8WX39 176 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 ARL2-SNX15V9GYD0 113 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 TCHHQ07283 1943 aa-0.9□□□□□ -2.55
KRIT1-220ENST00000470309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.9□□□□□ -2.559e-8■■□□□ 12
KRIT1-220ENST00000470309 TACC2O95359 2948 aa-0.91□□□□□ -2.55
KRIT1-220ENST00000470309 ARHGEF5Q12774 1597 aa-0.91□□□□□ -2.55
KRIT1-220ENST00000470309 SETBP1Q9Y6X0 1596 aa-0.91□□□□□ -2.55
KRIT1-220ENST00000470309 PHLPP1O60346 1717 aa-0.91□□□□□ -2.55
KRIT1-220ENST00000470309 CPSF4LA6NMK7 179 aaKnown RBP-0.91□□□□□ -2.56
KRIT1-220ENST00000470309 APOC2P02655 101 aa-0.91□□□□□ -2.56
KRIT1-220ENST00000470309 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.91□□□□□ -2.56
KRIT1-220ENST00000470309 USMG5Q96IX5 58 aa-0.91□□□□□ -2.56
KRIT1-220ENST00000470309 CDC42SE2Q9NRR3 84 aa-0.91□□□□□ -2.56
KRIT1-220ENST00000470309 UQCR10Q9UDW1 63 aa-0.91□□□□□ -2.56
KRIT1-220ENST00000470309 SONP18583 2426 aaKnown RBP-0.91□□□□□ -2.56
KRIT1-220ENST00000470309 FOCADQ5VW36 1801 aa-0.92□□□□□ -2.56
KRIT1-220ENST00000470309 FMN2Q9NZ56 1722 aa-0.92□□□□□ -2.56
KRIT1-220ENST00000470309 AKAP9Q99996 3911 aa-0.92□□□□□ -2.56
KRIT1-220ENST00000470309 LOC100130705A0A1B0GUX0 176 aa-0.92□□□□□ -2.56
KRIT1-220ENST00000470309 IFNGP01579 166 aa-0.92□□□□□ -2.56
KRIT1-220ENST00000470309 WHAMMP3Q1A5X7 153 aa-0.92□□□□□ -2.56
KRIT1-220ENST00000470309 VPS13DQ5THJ4 4388 aa-0.92□□□□□ -2.56
KRIT1-220ENST00000470309 TET3O43151 1660 aa-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 DNAH9Q9NYC9 4486 aa-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 BTG2P78543 158 aa-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 FAM167A-AS1Q96KT0 104 aa-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 PRO1933Q9H354 126 aa-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 SMG6Q86US8 1419 aaKnown RBP-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 USP9YO00507 2555 aaPredicted RBP-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 MBD5Q9P267 1494 aa-0.93□□□□□ -2.56
KRIT1-220ENST00000470309 PRRC2CQ9Y520 2896 aaKnown RBP-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 ROBO1Q9Y6N7 1651 aa-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 RYR3Q15413 4870 aa-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 OOSP1A8MZH6 123 aa-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 SFTA2Q6UW10 78 aa-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 SHROOM2Q13796 1616 aa-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 C1orf167Q5SNV9 1468 aa-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 HTTP42858 3142 aa-0.94□□□□□ -2.56
KRIT1-220ENST00000470309 FAT3Q8TDW7 4589 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms