RNA–Protein interactions for RNA: ENST00000470271.5

CTPS1-206, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-206ENST00000470271 CIRBPQ14011 172 aaKnown RBP12.72□□□□□ -0.37
CTPS1-206ENST00000470271 SNAPINO95295 136 aa12.71□□□□□ -0.37
CTPS1-206ENST00000470271 APOMO95445 188 aa12.71□□□□□ -0.37
CTPS1-206ENST00000470271 G0S2P27469 103 aa12.71□□□□□ -0.37
CTPS1-206ENST00000470271 CARD19Q96LW7 228 aa12.71□□□□□ -0.37
CTPS1-206ENST00000470271 ALKBH7Q9BT30 221 aaPredicted RBP12.71□□□□□ -0.37
CTPS1-206ENST00000470271 MRPL18Q9H0U6 180 aaKnown RBP12.71□□□□□ -0.37
CTPS1-206ENST00000470271 IGHV3OR16-9A0A0B4J2B5 98 aa12.7□□□□□ -0.38
CTPS1-206ENST00000470271 CHTF8P0CG12 524 aa12.7□□□□□ -0.38
CTPS1-206ENST00000470271 FABP9Q0Z7S8 132 aa12.7□□□□□ -0.38
CTPS1-206ENST00000470271 TEX43Q6ZNM6 134 aa12.7□□□□□ -0.38
CTPS1-206ENST00000470271 PRSS3P2Q8NHM4 247 aa12.7□□□□□ -0.38
CTPS1-206ENST00000470271 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
CTPS1-206ENST00000470271 IGLV4-69A0A075B6H9 119 aa12.69□□□□□ -0.38
CTPS1-206ENST00000470271 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
CTPS1-206ENST00000470271 Q6ZN92 141 aa12.69□□□□□ -0.38
CTPS1-206ENST00000470271 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
CTPS1-206ENST00000470271 TGIF2-C20orf24A0A0A6YYL0 155 aa12.68□□□□□ -0.38
CTPS1-206ENST00000470271 IGIPA6NJ69 53 aa12.68□□□□□ -0.38
CTPS1-206ENST00000470271 NPSP0C0P6 89 aa12.68□□□□□ -0.38
CTPS1-206ENST00000470271 C2orf88Q9BSF0 95 aa12.68□□□□□ -0.38
CTPS1-206ENST00000470271 VCX2Q9H322 139 aa12.67□□□□□ -0.38
CTPS1-206ENST00000470271 PKIGQ9Y2B9 76 aa12.67□□□□□ -0.38
CTPS1-206ENST00000470271 A0A087WYN8 130 aa12.66□□□□□ -0.38
CTPS1-206ENST00000470271 SPAG11BQ08648 103 aa12.66□□□□□ -0.38
CTPS1-206ENST00000470271 LINC00242Q5T6M2 205 aa12.66□□□□□ -0.38
CTPS1-206ENST00000470271 OR10D4PQ8NGN7 298 aa12.66□□□□□ -0.38
CTPS1-206ENST00000470271 C2orf48Q96LS8 159 aa12.66□□□□□ -0.38
CTPS1-206ENST00000470271 CAMK2N2Q96S95 79 aa12.66□□□□□ -0.38
CTPS1-206ENST00000470271 AMELXQ99217 191 aa12.66□□□□□ -0.38
CTPS1-206ENST00000470271 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
CTPS1-206ENST00000470271 MYCBP2O75592 4640 aa12.65□□□□□ -0.38
CTPS1-206ENST00000470271 IGKV2-24A0A0C4DH68 120 aa12.65□□□□□ -0.38
CTPS1-206ENST00000470271 UBE2D1P51668 147 aa12.65□□□□□ -0.38
CTPS1-206ENST00000470271 ZC2HC1BQ5TFG8 222 aa12.65□□□□□ -0.38
CTPS1-206ENST00000470271 LINC00173Q6ZV60 143 aa12.65□□□□□ -0.38
CTPS1-206ENST00000470271 TOMM6Q96B49 74 aa12.65□□□□□ -0.38
CTPS1-206ENST00000470271 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
CTPS1-206ENST00000470271 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
CTPS1-206ENST00000470271 Q6ZRU5 148 aa12.64□□□□□ -0.39
CTPS1-206ENST00000470271 ORAOV1Q8WV07 137 aa12.64□□□□□ -0.39
CTPS1-206ENST00000470271 TIMM17AQ99595 171 aa12.64□□□□□ -0.39
CTPS1-206ENST00000470271 TRAPPC1Q9Y5R8 145 aa12.64□□□□□ -0.39
CTPS1-206ENST00000470271 A0A087WZ39 114 aa12.63□□□□□ -0.39
CTPS1-206ENST00000470271 A0A096LNI7 61 aa12.63□□□□□ -0.39
CTPS1-206ENST00000470271 MAJINQ3KP22 176 aa12.63□□□□□ -0.39
CTPS1-206ENST00000470271 FA2HQ7L5A8 372 aa12.62□□□□□ -0.39
CTPS1-206ENST00000470271 SMCO4Q9NRQ5 59 aa12.62□□□□□ -0.39
CTPS1-206ENST00000470271 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
CTPS1-206ENST00000470271 LINC00474Q9P2X8 69 aa12.62□□□□□ -0.39
CTPS1-206ENST00000470271 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
CTPS1-206ENST00000470271 KRTAP10-4P60372 401 aaPredicted RBP12.61□□□□□ -0.39
CTPS1-206ENST00000470271 RPL37AP61513 92 aaKnown RBP12.61□□□□□ -0.39
CTPS1-206ENST00000470271 ERASQ7Z444 233 aa12.61□□□□□ -0.39
CTPS1-206ENST00000470271 SCGB3A1Q96QR1 104 aa12.61□□□□□ -0.39
CTPS1-206ENST00000470271 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
CTPS1-206ENST00000470271 F8WDY8 70 aa12.59□□□□□ -0.39
CTPS1-206ENST00000470271 STPG4Q8N801 248 aa12.59□□□□□ -0.39
CTPS1-206ENST00000470271 FAM19A3Q7Z5A8 133 aa12.58□□□□□ -0.4
CTPS1-206ENST00000470271 LINC01561Q8N1V8 128 aa12.58□□□□□ -0.4
CTPS1-206ENST00000470271 NDUFA1O15239 70 aa12.57□□□□□ -0.4
CTPS1-206ENST00000470271 SEC11AP67812 179 aa12.57□□□□□ -0.4
CTPS1-206ENST00000470271 RNF151Q2KHN1 245 aa12.57□□□□□ -0.4
CTPS1-206ENST00000470271 C18orf32Q8TCD1 76 aa12.57□□□□□ -0.4
CTPS1-206ENST00000470271 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
CTPS1-206ENST00000470271 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
CTPS1-206ENST00000470271 PTTG1IPP53801 180 aa12.56□□□□□ -0.4
CTPS1-206ENST00000470271 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
CTPS1-206ENST00000470271 A0A0J9YXV3 536 aa12.55□□□□□ -0.4
CTPS1-206ENST00000470271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.55□□□□□ -0.4
CTPS1-206ENST00000470271 HERVK_113P63121 156 aa12.55□□□□□ -0.4
CTPS1-206ENST00000470271 SLC7A5P1Q8MH63 180 aa12.55□□□□□ -0.4
CTPS1-206ENST00000470271 PKHD1L1Q86WI1 4243 aa12.54□□□□□ -0.4
CTPS1-206ENST00000470271 KIAA0087Q14695 138 aa12.54□□□□□ -0.4
CTPS1-206ENST00000470271 GEMIN7Q9H840 131 aaKnown RBP12.54□□□□□ -0.4
CTPS1-206ENST00000470271 LINC00614P0C842 121 aa12.53□□□□□ -0.4
CTPS1-206ENST00000470271 C10orf25Q5T742 122 aa12.53□□□□□ -0.4
CTPS1-206ENST00000470271 UNQ6190/PRO20217Q6UXQ8 127 aa12.53□□□□□ -0.4
CTPS1-206ENST00000470271 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
CTPS1-206ENST00000470271 URB1-AS1Q96HZ7 61 aa12.53□□□□□ -0.4
CTPS1-206ENST00000470271 RPL18AQ02543 176 aaKnown RBP12.52□□□□□ -0.41
CTPS1-206ENST00000470271 CBLN2Q8IUK8 224 aa12.52□□□□□ -0.41
CTPS1-206ENST00000470271 CDKN2A-AS1Q9UH64 79 aa12.52□□□□□ -0.41
CTPS1-206ENST00000470271 DMBT1Q9UGM3 2413 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-206ENST00000470271 RAB5BP61020 215 aa12.51□□□□□ -0.41
CTPS1-206ENST00000470271 CST9LQ9H4G1 147 aa12.51□□□□□ -0.41
CTPS1-206ENST00000470271 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
CTPS1-206ENST00000470271 PRSS2P07478 247 aa12.5□□□□□ -0.41
CTPS1-206ENST00000470271 PMVKQ15126 192 aa12.5□□□□□ -0.41
CTPS1-206ENST00000470271 PACRGQ96M98 296 aaPredicted RBP12.5□□□□□ -0.41
CTPS1-206ENST00000470271 A0A096LNJ9 63 aa12.49□□□□□ -0.41
CTPS1-206ENST00000470271 C2orf82Q6UX34 121 aa12.49□□□□□ -0.41
CTPS1-206ENST00000470271 TOMM7Q9P0U1 55 aa12.49□□□□□ -0.41
CTPS1-206ENST00000470271 HERC1Q15751 4861 aa12.49□□□□□ -0.41
CTPS1-206ENST00000470271 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
CTPS1-206ENST00000470271 HBDP02042 147 aa12.48□□□□□ -0.41
CTPS1-206ENST00000470271 TLX1NBP0CAT3 122 aa12.48□□□□□ -0.41
CTPS1-206ENST00000470271 LINC00469Q8N7U9 141 aa12.48□□□□□ -0.41
CTPS1-206ENST00000470271 TRBV30A0A0K0K1B3 111 aa12.47□□□□□ -0.41
CTPS1-206ENST00000470271 HNRNPA3P51991 378 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms