RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 A0A087X002 238 aa10.72□□□□□ -0.69
TTC28-205ENST00000469670 SMKR1H3BMG3 65 aa10.72□□□□□ -0.69
TTC28-205ENST00000469670 AMN1Q8IY45 258 aa10.72□□□□□ -0.69
TTC28-205ENST00000469670 KIR2DL4Q99706 377 aa10.72□□□□□ -0.69
TTC28-205ENST00000469670 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
TTC28-205ENST00000469670 TMEM18Q96B42 140 aa10.71□□□□□ -0.69
TTC28-205ENST00000469670 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
TTC28-205ENST00000469670 SUMO2P61956 95 aaKnown RBP10.7□□□□□ -0.7
TTC28-205ENST00000469670 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
TTC28-205ENST00000469670 TYMSOSQ8TAI1 123 aa10.7□□□□□ -0.7
TTC28-205ENST00000469670 CT83Q5H943 113 aa10.69□□□□□ -0.7
TTC28-205ENST00000469670 NRACQ8N912 160 aa10.69□□□□□ -0.7
TTC28-205ENST00000469670 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
TTC28-205ENST00000469670 NUPR1O60356 82 aa10.68□□□□□ -0.7
TTC28-205ENST00000469670 PPP1R17O96001 155 aa10.68□□□□□ -0.7
TTC28-205ENST00000469670 CRYGAP11844 174 aa10.68□□□□□ -0.7
TTC28-205ENST00000469670 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
TTC28-205ENST00000469670 RETNLBQ9BQ08 111 aa10.68□□□□□ -0.7
TTC28-205ENST00000469670 TRBV30A0A0K0K1B3 111 aa10.67□□□□□ -0.7
TTC28-205ENST00000469670 HIGD1CA8MV81 97 aa10.67□□□□□ -0.7
TTC28-205ENST00000469670 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
TTC28-205ENST00000469670 KIAA0087Q14695 138 aa10.67□□□□□ -0.7
TTC28-205ENST00000469670 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
TTC28-205ENST00000469670 RPL39P62891 51 aaKnown RBP10.66□□□□□ -0.7
TTC28-205ENST00000469670 CTDSP1Q9GZU7 261 aa10.66□□□□□ -0.7
TTC28-205ENST00000469670 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
TTC28-205ENST00000469670 TPRXLQ17RH7 258 aa10.65□□□□□ -0.7
TTC28-205ENST00000469670 IFITM10A6NMD0 228 aa10.64□□□□□ -0.71
TTC28-205ENST00000469670 HBBP68871 147 aa10.64□□□□□ -0.71
TTC28-205ENST00000469670 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
TTC28-205ENST00000469670 PACRGQ96M98 296 aaPredicted RBP10.64□□□□□ -0.71
TTC28-205ENST00000469670 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
TTC28-205ENST00000469670 MRPS36P82909 103 aaKnown RBP10.63□□□□□ -0.71
TTC28-205ENST00000469670 LCE2DQ5TA82 110 aaPredicted RBP10.63□□□□□ -0.71
TTC28-205ENST00000469670 SPANXA1Q9NS26 97 aa10.63□□□□□ -0.71
TTC28-205ENST00000469670 C22orf24Q9Y442 160 aa10.63□□□□□ -0.71
TTC28-205ENST00000469670 RPL28P46779 137 aaKnown RBP10.62□□□□□ -0.71
TTC28-205ENST00000469670 RIGQ13278 110 aa10.61□□□□□ -0.71
TTC28-205ENST00000469670 LBHQ53QV2 105 aaPredicted RBP10.61□□□□□ -0.71
TTC28-205ENST00000469670 IGLV7-46A0A075B6I9 117 aa10.6□□□□□ -0.71
TTC28-205ENST00000469670 TMEM250H0YL14 139 aa10.6□□□□□ -0.71
TTC28-205ENST00000469670 TCAPO15273 167 aa10.6□□□□□ -0.71
TTC28-205ENST00000469670 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
TTC28-205ENST00000469670 ANAPC11Q9NYG5 84 aa10.6□□□□□ -0.71
TTC28-205ENST00000469670 CRCT1Q9UGL9 99 aa10.6□□□□□ -0.71
TTC28-205ENST00000469670 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
TTC28-205ENST00000469670 KRTAP13-2Q52LG2 175 aa10.59□□□□□ -0.71
TTC28-205ENST00000469670 LINC00469Q8N7U9 141 aa10.59□□□□□ -0.71
TTC28-205ENST00000469670 ZNF727A8MUV8 499 aa10.58□□□□□ -0.72
TTC28-205ENST00000469670 BCE1O60756 84 aa10.58□□□□□ -0.72
TTC28-205ENST00000469670 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
TTC28-205ENST00000469670 IFITM2Q01629 132 aa10.58□□□□□ -0.72
TTC28-205ENST00000469670 CEBPGP53567 150 aa10.57□□□□□ -0.72
TTC28-205ENST00000469670 LINC00242Q5T6M2 205 aa10.57□□□□□ -0.72
TTC28-205ENST00000469670 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
TTC28-205ENST00000469670 LINC00304Q8N9R0 145 aa10.57□□□□□ -0.72
TTC28-205ENST00000469670 FSIP2Q5CZC0 6907 aa10.56□□□□□ -0.72
TTC28-205ENST00000469670 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
TTC28-205ENST00000469670 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
TTC28-205ENST00000469670 XAGE1AQ9HD64 81 aa10.56□□□□□ -0.72
TTC28-205ENST00000469670 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
TTC28-205ENST00000469670 LINC00862A6NCI5 91 aa10.55□□□□□ -0.72
TTC28-205ENST00000469670 MRPL55Q7Z7F7 128 aaKnown RBP10.55□□□□□ -0.72
TTC28-205ENST00000469670 LINC01551Q86U37 167 aa10.55□□□□□ -0.72
TTC28-205ENST00000469670 SMIM2Q9BVW6 85 aa10.54□□□□□ -0.72
TTC28-205ENST00000469670 TP73-AS1Q9UF72 201 aa10.54□□□□□ -0.72
TTC28-205ENST00000469670 TNFRSF6BO95407 300 aa10.53□□□□□ -0.72
TTC28-205ENST00000469670 CKS2P33552 79 aa10.53□□□□□ -0.72
TTC28-205ENST00000469670 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
TTC28-205ENST00000469670 SLC51BQ86UW2 128 aa10.53□□□□□ -0.72
TTC28-205ENST00000469670 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
TTC28-205ENST00000469670 PRSS2P07478 247 aa10.52□□□□□ -0.73
TTC28-205ENST00000469670 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
TTC28-205ENST00000469670 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
TTC28-205ENST00000469670 V9GYV3 84 aa10.52□□□□□ -0.73
TTC28-205ENST00000469670 CKS1BP61024 79 aa10.51□□□□□ -0.73
TTC28-205ENST00000469670 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
TTC28-205ENST00000469670 PPDPFQ9H3Y8 114 aa10.51□□□□□ -0.73
TTC28-205ENST00000469670 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
TTC28-205ENST00000469670 IGLV4-3A0A075B6K6 122 aa10.5□□□□□ -0.73
TTC28-205ENST00000469670 NAT8BQ9UHF3 227 aa10.5□□□□□ -0.73
TTC28-205ENST00000469670 RPL37AP8A6NKH3 93 aa10.49□□□□□ -0.73
TTC28-205ENST00000469670 C6orf226Q5I0X4 101 aa10.49□□□□□ -0.73
TTC28-205ENST00000469670 LINC00167Q96N53 147 aa10.49□□□□□ -0.73
TTC28-205ENST00000469670 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
TTC28-205ENST00000469670 CTAG1AP78358 180 aa10.48□□□□□ -0.73
TTC28-205ENST00000469670 Q6ZN92 141 aa10.48□□□□□ -0.73
TTC28-205ENST00000469670 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
TTC28-205ENST00000469670 IGKV2D-26A0A0A0MRZ7 120 aa10.47□□□□□ -0.73
TTC28-205ENST00000469670 D6R8Y8 96 aa10.47□□□□□ -0.73
TTC28-205ENST00000469670 NPYP01303 97 aa10.47□□□□□ -0.73
TTC28-205ENST00000469670 UBE2AP49459 152 aa10.47□□□□□ -0.73
TTC28-205ENST00000469670 KRTAP13-1Q8IUC0 172 aa10.47□□□□□ -0.73
TTC28-205ENST00000469670 FAM74A3Q4VXF1 159 aa10.46□□□□□ -0.73
TTC28-205ENST00000469670 TEX43Q6ZNM6 134 aa10.46□□□□□ -0.73
TTC28-205ENST00000469670 Q8IZM0 81 aa10.46□□□□□ -0.73
TTC28-205ENST00000469670 RAB5AP20339 215 aa10.45□□□□□ -0.74
TTC28-205ENST00000469670 ALKBH7Q9BT30 221 aaPredicted RBP10.45□□□□□ -0.74
TTC28-205ENST00000469670 EIF5A2Q9GZV4 153 aaKnown RBP10.45□□□□□ -0.74
TTC28-205ENST00000469670 GAGE10A6NGK3 116 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms