RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 KIF21AQ7Z4S6 1674 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 SMG6Q86US8 1419 aaKnown RBP-0.72□□□□□ -2.52
TPR-204ENST00000469463 EYSQ5T1H1 3165 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 DNAH1Q9P2D7 4330 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 TRBV7-4A0A0J9YYF1 115 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 LINC00959A0A1B0GUT2 108 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 PPP1R17O96001 155 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 LINC00694P0DN24 101 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 MT1GP13640 62 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 DEFB112Q30KQ8 113 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 BAGE2Q86Y30 109 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 TMEM263Q8WUH6 116 aaKnown RBP-0.72□□□□□ -2.52
TPR-204ENST00000469463 SMIM3Q9BZL3 60 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 NDUFA4L2Q9NRX3 87 aa-0.72□□□□□ -2.52
TPR-204ENST00000469463 AKAP13Q12802 2813 aa-0.72□□□□□ -2.53
TPR-204ENST00000469463 MYOM3Q5VTT5 1437 aa-0.72□□□□□ -2.53
TPR-204ENST00000469463 PPIP5K1Q6PFW1 1433 aa-0.72□□□□□ -2.53
TPR-204ENST00000469463 MRC2Q9UBG0 1479 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 SBF2Q86WG5 1849 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 MYO15AQ9UKN7 3530 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 TRAV13-2A0A0B4J235 113 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 F8VRH5 84 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 K7ERU9 68 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 MT1BP07438 61 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 SCGB1A1P11684 91 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 GUCA1AP43080 201 aaPredicted RBP-0.73□□□□□ -2.53
TPR-204ENST00000469463 RRAS2P62070 204 aaPredicted RBP-0.73□□□□□ -2.53
TPR-204ENST00000469463 TMEM170BQ5T4T1 132 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 Q8N8P6 123 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 SPTSSAQ969W0 71 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 DPH3Q96FX2 82 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 SACSQ9NZJ4 4579 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 REV3LO60673 3130 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 QRICH2Q9H0J4 1663 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 NWD2Q9ULI1 1742 aa-0.73□□□□□ -2.53
TPR-204ENST00000469463 CMYA5Q8N3K9 4069 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 SETBP1Q9Y6X0 1596 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 LRRK2Q5S007 2527 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 GOLGA4Q13439 2230 aaKnown RBP-0.74□□□□□ -2.53
TPR-204ENST00000469463 PAPPA2Q9BXP8 1791 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 TRBV7-3A0A075B6L6 115 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 CTXND1A0A1B0GTU2 59 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 IGLC7A0M8Q6 106 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 H0YAA0 97 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 M0R2Z0 102 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 MT1HP80294 61 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 C12orf73Q69YU5 71 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 SEC11CQ9BY50 192 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 TMEM191AQ9H0A3 160 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 CDC42SE2Q9NRR3 84 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 LINC00846Q9NV44 126 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.74□□□□□ -2.53
TPR-204ENST00000469463 DOCK1Q14185 1865 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 FHAD1B1AJZ9 1412 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 POLA1P09884 1462 aaPredicted RBP-0.74□□□□□ -2.53
TPR-204ENST00000469463 NKTRP30414 1462 aaKnown RBP-0.74□□□□□ -2.53
TPR-204ENST00000469463 HMGXB3Q12766 1538 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 DYNC1H1Q14204 4646 aaKnown RBP-0.74□□□□□ -2.53
TPR-204ENST00000469463 DNAH7Q8WXX0 4024 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 ARHGEF5Q12774 1597 aa-0.74□□□□□ -2.53
TPR-204ENST00000469463 SHROOM2Q13796 1616 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 TET3O43151 1660 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 COL4A6Q14031 1691 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 PATJQ8NI35 1801 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 MYH6P13533 1939 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 LOC285095A0A1B0GVY8 99 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 APOC3P02656 99 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 COX8AP10176 69 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 B2MP61769 119 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 C10orf128Q5T292 105 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 C10orf113Q5VZT2 155 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 KRTAP8-1Q8IUC2 63 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 USMG5Q96IX5 58 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 MGST2Q99735 147 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 SPANXDQ9BXN6 97 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 GSKIPQ9P0R6 139 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 V9GYH0 126 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 TROQ12816 1431 aaPredicted RBP-0.75□□□□□ -2.53
TPR-204ENST00000469463 NCOA3Q9Y6Q9 1424 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 CFTRP13569 1480 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 ARHGEF12Q9NZN5 1544 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 A0A0G2JMZ2 1700 aa-0.75□□□□□ -2.53
TPR-204ENST00000469463 NBASA2RRP1 2371 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 MYO9AB2RTY4 2548 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 HMGN4O00479 90 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 SFT2D2O95562 160 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 IFNGP01579 166 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 MGPP08493 103 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 CKS1BP61024 79 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 BTG2P78543 158 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 TAC4Q86UU9 113 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 MYOZ3Q8TDC0 251 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 LSM10Q969L4 123 aaKnown RBP-0.76□□□□□ -2.53
TPR-204ENST00000469463 AQP10Q96PS8 301 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 SNRNP25Q9BV90 132 aaKnown RBP-0.76□□□□□ -2.53
TPR-204ENST00000469463 NAA60Q9H7X0 242 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 DYNLRB1Q9NP97 96 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 ANKRD30AQ9BXX3 1397 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 GRIN2AQ12879 1464 aa-0.76□□□□□ -2.53
TPR-204ENST00000469463 DIP2CQ9Y2E4 1556 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms