RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 K7EQD1 137 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 PIK3CD-AS1Q5SR53 167 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 CHAC1Q9BUX1 264 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 DNAH11Q96DT5 4516 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 DYNC1H1Q14204 4646 aaKnown RBP9.92□□□□□ -0.82
COL27A1-203ENST00000468565 PAPPA-AS1Q5QFB9 102 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 LYPD5Q6UWN5 251 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 KRTAP1-5Q9BYS1 174 aa9.92□□□□□ -0.82
COL27A1-203ENST00000468565 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
COL27A1-203ENST00000468565 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
COL27A1-203ENST00000468565 RS1O15537 224 aa9.91□□□□□ -0.82
COL27A1-203ENST00000468565 GYPEP15421 78 aa9.91□□□□□ -0.82
COL27A1-203ENST00000468565 TTTY13Q9BZ97 58 aa9.91□□□□□ -0.82
COL27A1-203ENST00000468565 A8MWV9 139 aa9.9□□□□□ -0.82
COL27A1-203ENST00000468565 PMVKQ15126 192 aa9.9□□□□□ -0.82
COL27A1-203ENST00000468565 I3L3M4 83 aa9.9□□□□□ -0.83
COL27A1-203ENST00000468565 CKS1BP61024 79 aa9.9□□□□□ -0.83
COL27A1-203ENST00000468565 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.83
COL27A1-203ENST00000468565 TAL2Q16559 108 aa9.89□□□□□ -0.83
COL27A1-203ENST00000468565 SH2D6Q7Z4S9 175 aa9.89□□□□□ -0.83
COL27A1-203ENST00000468565 E9PLD3 99 aa9.88□□□□□ -0.83
COL27A1-203ENST00000468565 TSHBP01222 138 aa9.88□□□□□ -0.83
COL27A1-203ENST00000468565 GCSHP23434 173 aa9.88□□□□□ -0.83
COL27A1-203ENST00000468565 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
COL27A1-203ENST00000468565 MAPKAPK5-AS1Q8N8E1 139 aa9.88□□□□□ -0.83
COL27A1-203ENST00000468565 HERVK_113P61574 105 aa9.88□□□□□ -0.83
COL27A1-203ENST00000468565 MYMXA0A1B0GTQ4 84 aa9.87□□□□□ -0.83
COL27A1-203ENST00000468565 TRBV6-4A0A1B0GX49 114 aa9.87□□□□□ -0.83
COL27A1-203ENST00000468565 RHODO00212 210 aa9.87□□□□□ -0.83
COL27A1-203ENST00000468565 FABP2P12104 132 aa9.87□□□□□ -0.83
COL27A1-203ENST00000468565 DEFB104AQ8WTQ1 72 aa9.87□□□□□ -0.83
COL27A1-203ENST00000468565 HERC2O95714 4834 aa9.87□□□□□ -0.83
COL27A1-203ENST00000468565 CEND1Q8N111 149 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 SLC25A29Q8N8R3 303 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 PRADC1Q9BSG0 188 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 LOC100131303A0A0U1RQF7 123 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 SMIM13P0DJ93 91 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 TIRAPP58753 221 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 C20orf203Q8NBC4 194 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 TNFRSF18Q9Y5U5 241 aa9.86□□□□□ -0.83
COL27A1-203ENST00000468565 IGLV4-69A0A075B6H9 119 aa9.85□□□□□ -0.83
COL27A1-203ENST00000468565 IGHV3-73A0A0B4J1V6 119 aa9.85□□□□□ -0.83
COL27A1-203ENST00000468565 A0A1W2PPM0 123 aa9.85□□□□□ -0.83
COL27A1-203ENST00000468565 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
COL27A1-203ENST00000468565 TM2D2Q9BX73 214 aa9.85□□□□□ -0.83
COL27A1-203ENST00000468565 SPCS1Q9Y6A9 102 aa9.85□□□□□ -0.83
COL27A1-203ENST00000468565 C11orf86A6NJI1 115 aa9.84□□□□□ -0.83
COL27A1-203ENST00000468565 KIAA1109Q2LD37 5005 aa9.84□□□□□ -0.83
COL27A1-203ENST00000468565 FXYD2P54710 66 aa9.84□□□□□ -0.83
COL27A1-203ENST00000468565 SMAGPQ0VAQ4 97 aa9.84□□□□□ -0.83
COL27A1-203ENST00000468565 DNAH10OSP0CZ25 163 aa9.83□□□□□ -0.84
COL27A1-203ENST00000468565 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
COL27A1-203ENST00000468565 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
COL27A1-203ENST00000468565 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
COL27A1-203ENST00000468565 H3BUT2 72 aa9.82□□□□□ -0.84
COL27A1-203ENST00000468565 RAB37Q96AX2 223 aa9.82□□□□□ -0.84
COL27A1-203ENST00000468565 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
COL27A1-203ENST00000468565 ZNF815PA8K554 130 aa9.82□□□□□ -0.84
COL27A1-203ENST00000468565 F8W1H4 67 aa9.82□□□□□ -0.84
COL27A1-203ENST00000468565 RPL24P83731 157 aaKnown RBP9.82□□□□□ -0.84
COL27A1-203ENST00000468565 Q6ZRN7 208 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-203ENST00000468565 TMEM170BQ5T4T1 132 aa9.81□□□□□ -0.84
COL27A1-203ENST00000468565 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
COL27A1-203ENST00000468565 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
COL27A1-203ENST00000468565 PYGO1Q9Y3Y4 419 aa9.81□□□□□ -0.84
COL27A1-203ENST00000468565 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
COL27A1-203ENST00000468565 VCX2Q9H322 139 aa9.8□□□□□ -0.84
COL27A1-203ENST00000468565 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
COL27A1-203ENST00000468565 NHP2Q9NX24 153 aaKnown RBP9.8□□□□□ -0.84
COL27A1-203ENST00000468565 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
COL27A1-203ENST00000468565 SCGB1D4Q6XE38 83 aa9.8□□□□□ -0.84
COL27A1-203ENST00000468565 Q6ZSN1 163 aa9.8□□□□□ -0.84
COL27A1-203ENST00000468565 IGLV4-3A0A075B6K6 122 aa9.79□□□□□ -0.84
COL27A1-203ENST00000468565 TSPAN13O95857 204 aa9.79□□□□□ -0.84
COL27A1-203ENST00000468565 LINC00694P0DN24 101 aa9.79□□□□□ -0.84
COL27A1-203ENST00000468565 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
COL27A1-203ENST00000468565 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
COL27A1-203ENST00000468565 OPRPNQ99935 248 aaPredicted RBP9.79□□□□□ -0.84
COL27A1-203ENST00000468565 C16orf90A8MZG2 172 aa9.78□□□□□ -0.84
COL27A1-203ENST00000468565 LELP1Q5T871 98 aa9.78□□□□□ -0.84
COL27A1-203ENST00000468565 IGHV3-38A0A0C4DH36 116 aa9.78□□□□□ -0.84
COL27A1-203ENST00000468565 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
COL27A1-203ENST00000468565 LRP1BQ9NZR2 4599 aa9.77□□□□□ -0.85
COL27A1-203ENST00000468565 NAA38Q9BRA0 125 aaKnown RBP9.77□□□□□ -0.85
COL27A1-203ENST00000468565 K7ERJ3 54 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 LGALS3P17931 250 aaKnown RBP9.76□□□□□ -0.85
COL27A1-203ENST00000468565 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 LEPROTO15243 131 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 GAGE4Q13068 117 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 GAGE5Q13069 117 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 GAGE13Q4V321 117 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 AMELXQ99217 191 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
COL27A1-203ENST00000468565 DNAH5Q8TE73 4624 aa9.75□□□□□ -0.85
COL27A1-203ENST00000468565 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
COL27A1-203ENST00000468565 J3QQQ9 107 aa9.75□□□□□ -0.85
COL27A1-203ENST00000468565 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
COL27A1-203ENST00000468565 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
COL27A1-203ENST00000468565 SPANXB1Q9NS25 103 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms