RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 ALPK2Q86TB3 2170 aa2.04□□□□□ -2.08
CDHR3-206ENST00000468477 FDCSPQ8NFU4 85 aa2.04□□□□□ -2.08
CDHR3-206ENST00000468477 PPP1R1CQ8WVI7 109 aa2.04□□□□□ -2.08
CDHR3-206ENST00000468477 DOCK10Q96BY6 2186 aa2.04□□□□□ -2.08
CDHR3-206ENST00000468477 AMELXQ99217 191 aa2.04□□□□□ -2.08
CDHR3-206ENST00000468477 ADAMTS9Q9P2N4 1935 aa2.04□□□□□ -2.08
CDHR3-206ENST00000468477 CEP170BQ9Y4F5 1589 aaPredicted RBP2.03□□□□□ -2.08
CDHR3-206ENST00000468477 IGKV2-28A0A075B6P5 120 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 A0A1W2PNN7 141 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 H3BRN7 92 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 M0R3E3 92 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 IGKV2D-28P01615 120 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 RNASE3P12724 160 aaKnown RBP2.03□□□□□ -2.08
CDHR3-206ENST00000468477 IL9P15248 144 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 IFI27P40305 119 aaPredicted RBP2.03□□□□□ -2.08
CDHR3-206ENST00000468477 CCL18P55774 89 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 BAGE3Q86Y29 109 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 BAGE2Q86Y30 109 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 TMEM14CQ9P0S9 112 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 DNAJC13O75165 2243 aa2.03□□□□□ -2.08
CDHR3-206ENST00000468477 COL14A1Q05707 1796 aaKnown RBP2.03□□□□□ -2.09
CDHR3-206ENST00000468477 TIAM2Q8IVF5 1701 aa2.03□□□□□ -2.09
CDHR3-206ENST00000468477 IFT172Q9UG01 1749 aa2.03□□□□□ -2.09
CDHR3-206ENST00000468477 COL4A1P02462 1669 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 ALS2Q96Q42 1657 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 SYCP2Q9BX26 1530 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 NKTRP30414 1462 aaKnown RBP2.02□□□□□ -2.09
CDHR3-206ENST00000468477 A0A087WVE0 104 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 TRBV6-5A0A0K0K1A5 114 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 CTXND1A0A1B0GTU2 59 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 ZNF563Q8TA94 476 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 UBE2D4Q9Y2X8 147 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 V9GYV3 84 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 ZNF236Q9UL36 1845 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 PAPPAQ13219 1627 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 ALKQ9UM73 1620 aa2.02□□□□□ -2.09
CDHR3-206ENST00000468477 PRRC2AP48634 2157 aaKnown RBP2.01□□□□□ -2.09
CDHR3-206ENST00000468477 PARP4Q9UKK3 1724 aaKnown RBP2.01□□□□□ -2.09
CDHR3-206ENST00000468477 NBDYA0A0U1RRE5 68 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 IGKV2-29A2NJV5 120 aaPredicted RBP2.01□□□□□ -2.09
CDHR3-206ENST00000468477 M0R135 149 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 IGLV3-19P01714 112 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 LINC00315P59091 139 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 FXYD3Q14802 87 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 TTTY12Q9BZ98 90 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 ANAPC11Q9NYG5 84 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 SNURFQ9Y675 71 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 LINC01558Q9Y6Z2 57 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 CICQ96RK0 1608 aaPredicted RBP2.01□□□□□ -2.09
CDHR3-206ENST00000468477 CLASP1Q7Z460 1538 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 RALGAPBQ86X10 1494 aa2.01□□□□□ -2.09
CDHR3-206ENST00000468477 CROCC2H7BZ55 1655 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 C5P01031 1676 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 NHSQ6T4R5 1651 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 IGKV2-40A0A087WW87 121 aaPredicted RBP2□□□□□ -2.09
CDHR3-206ENST00000468477 FXYD6-FXYD2A0A087WZ82 144 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 IGKV2D-40P01614 121 aaPredicted RBP2□□□□□ -2.09
CDHR3-206ENST00000468477 LINC00304Q8N9R0 145 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 FAM103A1Q9BTL3 118 aaKnown RBP2□□□□□ -2.09
CDHR3-206ENST00000468477 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 FXYD6Q9H0Q3 95 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 SDK1Q7Z5N4 2213 aa2□□□□□ -2.09
CDHR3-206ENST00000468477 FN1P02751 2386 aaKnown RBP2□□□□□ -2.09
CDHR3-206ENST00000468477 USP32Q8NFA0 1604 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 DIP2AQ14689 1571 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 IGKV2-24A0A0C4DH68 120 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 UQCR11O14957 56 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 KRTAP13-2Q52LG2 175 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 PRR9Q5T870 116 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 LINC00322Q6ZN03 302 aaPredicted RBP1.99□□□□□ -2.09
CDHR3-206ENST00000468477 DEFB132Q7Z7B7 95 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 C5orf56Q8N8D9 126 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 BCORQ6W2J9 1755 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 CD163L1Q9NR16 1453 aa1.99□□□□□ -2.09
CDHR3-206ENST00000468477 LRRC7Q96NW7 1537 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 A0A087WTM6 91 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 MGPP08493 103 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 S100A3P33764 101 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 ATXN8Q156A1 80 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 DEFB107AQ8IZN7 70 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 TXNDC17Q9BRA2 123 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 ATP7BP35670 1465 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 PHRF1Q9P1Y6 1649 aaKnown RBP1.98□□□□□ -2.09
CDHR3-206ENST00000468477 UGGT1Q9NYU2 1555 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 MAST1Q9Y2H9 1570 aa1.98□□□□□ -2.09
CDHR3-206ENST00000468477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.97□□□□□ -2.09
CDHR3-206ENST00000468477 TRBV7-4A0A0J9YYF1 115 aa1.97□□□□□ -2.09
CDHR3-206ENST00000468477 KRTAP1-4P0C5Y4 121 aa1.97□□□□□ -2.09
CDHR3-206ENST00000468477 FXYD4P59646 89 aa1.97□□□□□ -2.09
CDHR3-206ENST00000468477 COA5Q86WW8 74 aa1.97□□□□□ -2.09
CDHR3-206ENST00000468477 WFDC6Q9BQY6 131 aa1.97□□□□□ -2.09
CDHR3-206ENST00000468477 LRP6O75581 1613 aa1.97□□□□□ -2.09
CDHR3-206ENST00000468477 ZNF831Q5JPB2 1677 aa1.96□□□□□ -2.1
CDHR3-206ENST00000468477 A0A0D9SFI3 127 aa1.96□□□□□ -2.1
CDHR3-206ENST00000468477 A0A1B0GUT8 65 aa1.96□□□□□ -2.1
CDHR3-206ENST00000468477 KRTAP13-3Q3SY46 172 aa1.96□□□□□ -2.1
CDHR3-206ENST00000468477 HCP5Q6MZN7 132 aa1.96□□□□□ -2.1
CDHR3-206ENST00000468477 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
CDHR3-206ENST00000468477 CYYR1Q96J86 154 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms