RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
FAM53A-204ENST00000467215 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
FAM53A-204ENST00000467215 IGHV3OR16-9A0A0B4J2B5 98 aa11.46□□□□□ -0.57
FAM53A-204ENST00000467215 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
FAM53A-204ENST00000467215 LCE2AQ5TA79 106 aaPredicted RBP11.45□□□□□ -0.58
FAM53A-204ENST00000467215 F8WDY8 70 aa11.44□□□□□ -0.58
FAM53A-204ENST00000467215 SLC51BQ86UW2 128 aa11.44□□□□□ -0.58
FAM53A-204ENST00000467215 TMEM18Q96B42 140 aa11.44□□□□□ -0.58
FAM53A-204ENST00000467215 LINC01551Q86U37 167 aa11.43□□□□□ -0.58
FAM53A-204ENST00000467215 PPP1R2P9O14990 202 aa11.42□□□□□ -0.58
FAM53A-204ENST00000467215 PPP1R17O96001 155 aa11.42□□□□□ -0.58
FAM53A-204ENST00000467215 SMIM7Q9BQ49 75 aa11.42□□□□□ -0.58
FAM53A-204ENST00000467215 FAT4Q6V0I7 4981 aa11.42□□□□□ -0.58
FAM53A-204ENST00000467215 IFITM10A6NMD0 228 aa11.41□□□□□ -0.58
FAM53A-204ENST00000467215 TSPAN13O95857 204 aa11.41□□□□□ -0.58
FAM53A-204ENST00000467215 MRPL51Q4U2R6 128 aaKnown RBP11.41□□□□□ -0.58
FAM53A-204ENST00000467215 RIGQ13278 110 aa11.4□□□□□ -0.58
FAM53A-204ENST00000467215 TMEM241Q24JQ0 296 aa11.4□□□□□ -0.58
FAM53A-204ENST00000467215 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.58
FAM53A-204ENST00000467215 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
FAM53A-204ENST00000467215 V9GYV3 84 aa11.4□□□□□ -0.58
FAM53A-204ENST00000467215 KRTAP9-6A0A140TA67 174 aa11.39□□□□□ -0.59
FAM53A-204ENST00000467215 HBBP68871 147 aa11.39□□□□□ -0.59
FAM53A-204ENST00000467215 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
FAM53A-204ENST00000467215 SPANXA1Q9NS26 97 aa11.39□□□□□ -0.59
FAM53A-204ENST00000467215 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
FAM53A-204ENST00000467215 CARHSP1Q9Y2V2 147 aaKnown RBP11.38□□□□□ -0.59
FAM53A-204ENST00000467215 TGIF2-C20orf24A0A0A6YYL0 155 aa11.37□□□□□ -0.59
FAM53A-204ENST00000467215 MRPS36P82909 103 aaKnown RBP11.37□□□□□ -0.59
FAM53A-204ENST00000467215 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
FAM53A-204ENST00000467215 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
FAM53A-204ENST00000467215 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
FAM53A-204ENST00000467215 ZNF861PO60384 105 aa11.36□□□□□ -0.59
FAM53A-204ENST00000467215 ALKAL2Q6UX46 152 aa11.36□□□□□ -0.59
FAM53A-204ENST00000467215 C20orf78Q9BR46 151 aa11.36□□□□□ -0.59
FAM53A-204ENST00000467215 A0A087X002 238 aa11.35□□□□□ -0.59
FAM53A-204ENST00000467215 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
FAM53A-204ENST00000467215 RPL32P62910 135 aaKnown RBP11.35□□□□□ -0.59
FAM53A-204ENST00000467215 ZNF727A8MUV8 499 aa11.34□□□□□ -0.59
FAM53A-204ENST00000467215 TCTE3Q8IZS6 198 aa11.34□□□□□ -0.59
FAM53A-204ENST00000467215 TRBV24-1A0A075B6N3 115 aa11.33□□□□□ -0.6
FAM53A-204ENST00000467215 TCAPO15273 167 aa11.33□□□□□ -0.6
FAM53A-204ENST00000467215 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
FAM53A-204ENST00000467215 CKS2P33552 79 aa11.33□□□□□ -0.6
FAM53A-204ENST00000467215 BLOC1S1P78537 153 aa11.33□□□□□ -0.6
FAM53A-204ENST00000467215 NAT8BQ9UHF3 227 aa11.33□□□□□ -0.6
FAM53A-204ENST00000467215 LINC00862A6NCI5 91 aa11.32□□□□□ -0.6
FAM53A-204ENST00000467215 NPYP01303 97 aa11.32□□□□□ -0.6
FAM53A-204ENST00000467215 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
FAM53A-204ENST00000467215 EIF5A2Q9GZV4 153 aaKnown RBP11.32□□□□□ -0.6
FAM53A-204ENST00000467215 D6R8Y8 96 aa11.31□□□□□ -0.6
FAM53A-204ENST00000467215 LINC00242Q5T6M2 205 aa11.31□□□□□ -0.6
FAM53A-204ENST00000467215 LINC00469Q8N7U9 141 aa11.3□□□□□ -0.6
FAM53A-204ENST00000467215 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
FAM53A-204ENST00000467215 NUPR1O60356 82 aa11.29□□□□□ -0.6
FAM53A-204ENST00000467215 SRP19P09132 144 aaKnown RBP11.29□□□□□ -0.6
FAM53A-204ENST00000467215 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
FAM53A-204ENST00000467215 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
FAM53A-204ENST00000467215 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
FAM53A-204ENST00000467215 RETNLBQ9BQ08 111 aa11.28□□□□□ -0.6
FAM53A-204ENST00000467215 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.61
FAM53A-204ENST00000467215 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
FAM53A-204ENST00000467215 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
FAM53A-204ENST00000467215 SMIM27A0A1W2PRY6 76 aa11.26□□□□□ -0.61
FAM53A-204ENST00000467215 RPL23P62829 140 aaKnown RBP11.26□□□□□ -0.61
FAM53A-204ENST00000467215 MUC17Q685J3 4493 aa11.25□□□□□ -0.61
FAM53A-204ENST00000467215 ADIRFQ15847 76 aa11.25□□□□□ -0.61
FAM53A-204ENST00000467215 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
FAM53A-204ENST00000467215 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
FAM53A-204ENST00000467215 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
FAM53A-204ENST00000467215 ZC2HC1BQ5TFG8 222 aa11.24□□□□□ -0.61
FAM53A-204ENST00000467215 A0A1B0GW15 77 aa11.23□□□□□ -0.61
FAM53A-204ENST00000467215 CRYGAP11844 174 aa11.23□□□□□ -0.61
FAM53A-204ENST00000467215 RPL28P46779 137 aaKnown RBP11.23□□□□□ -0.61
FAM53A-204ENST00000467215 PYGO1Q9Y3Y4 419 aa11.23□□□□□ -0.61
FAM53A-204ENST00000467215 PRSS2P07478 247 aa11.22□□□□□ -0.61
FAM53A-204ENST00000467215 TEX43Q6ZNM6 134 aa11.22□□□□□ -0.61
FAM53A-204ENST00000467215 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
FAM53A-204ENST00000467215 ANAPC11Q9NYG5 84 aa11.22□□□□□ -0.61
FAM53A-204ENST00000467215 A0A1B0GXF2 115 aa11.21□□□□□ -0.61
FAM53A-204ENST00000467215 BCE1O60756 84 aa11.21□□□□□ -0.61
FAM53A-204ENST00000467215 KRTAP13-2Q52LG2 175 aa11.21□□□□□ -0.61
FAM53A-204ENST00000467215 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.61
FAM53A-204ENST00000467215 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
FAM53A-204ENST00000467215 LINC01561Q8N1V8 128 aa11.21□□□□□ -0.61
FAM53A-204ENST00000467215 RAB5AP20339 215 aa11.2□□□□□ -0.62
FAM53A-204ENST00000467215 CKS1BP61024 79 aa11.2□□□□□ -0.62
FAM53A-204ENST00000467215 F8W036 122 aa11.19□□□□□ -0.62
FAM53A-204ENST00000467215 Q6ZN92 141 aa11.19□□□□□ -0.62
FAM53A-204ENST00000467215 Q8IZM0 81 aa11.19□□□□□ -0.62
FAM53A-204ENST00000467215 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
FAM53A-204ENST00000467215 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
FAM53A-204ENST00000467215 PPBPP02775 128 aa11.18□□□□□ -0.62
FAM53A-204ENST00000467215 ORMDL3Q8N138 153 aa11.18□□□□□ -0.62
FAM53A-204ENST00000467215 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
FAM53A-204ENST00000467215 S100A8P05109 93 aa11.17□□□□□ -0.62
FAM53A-204ENST00000467215 TPRXLQ17RH7 258 aa11.17□□□□□ -0.62
FAM53A-204ENST00000467215 PRELID3AQ96N28 172 aa11.17□□□□□ -0.62
FAM53A-204ENST00000467215 NAT8Q9UHE5 227 aa11.17□□□□□ -0.62
FAM53A-204ENST00000467215 RPL37AP8A6NKH3 93 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms