RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 HERVK_113P63121 156 aa10.03□□□□□ -0.8
NPHP4-205ENST00000466897 FAT2Q9NYQ8 4349 aa10.02□□□□□ -0.8
NPHP4-205ENST00000466897 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
NPHP4-205ENST00000466897 COX7A2LO14548 114 aa10.02□□□□□ -0.81
NPHP4-205ENST00000466897 IGLC3P0DOY3 106 aa10.02□□□□□ -0.81
NPHP4-205ENST00000466897 FABP4P15090 132 aa10.02□□□□□ -0.81
NPHP4-205ENST00000466897 C14orf177Q52M58 125 aa10.02□□□□□ -0.81
NPHP4-205ENST00000466897 LINC01561Q8N1V8 128 aa10.02□□□□□ -0.81
NPHP4-205ENST00000466897 A0A087WZ39 114 aa10.01□□□□□ -0.81
NPHP4-205ENST00000466897 EREGO14944 169 aa10.01□□□□□ -0.81
NPHP4-205ENST00000466897 CFAP161Q6P656 301 aa10.01□□□□□ -0.81
NPHP4-205ENST00000466897 HIST3H2BBQ8N257 126 aa10.01□□□□□ -0.81
NPHP4-205ENST00000466897 MAP1LC3CQ9BXW4 147 aa10.01□□□□□ -0.81
NPHP4-205ENST00000466897 A0A0J9YXV3 536 aa10□□□□□ -0.81
NPHP4-205ENST00000466897 USP17L23D6RBM5 183 aa10□□□□□ -0.81
NPHP4-205ENST00000466897 COX6A2Q02221 97 aa10□□□□□ -0.81
NPHP4-205ENST00000466897 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
NPHP4-205ENST00000466897 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
NPHP4-205ENST00000466897 IGLV4-69A0A075B6H9 119 aa9.99□□□□□ -0.81
NPHP4-205ENST00000466897 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
NPHP4-205ENST00000466897 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
NPHP4-205ENST00000466897 F8VRH5 84 aa9.99□□□□□ -0.81
NPHP4-205ENST00000466897 WFDC2Q14508 124 aa9.99□□□□□ -0.81
NPHP4-205ENST00000466897 Q8N814 137 aa9.99□□□□□ -0.81
NPHP4-205ENST00000466897 CHTOPQ9Y3Y2 248 aaKnown RBP9.99□□□□□ -0.81
NPHP4-205ENST00000466897 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
NPHP4-205ENST00000466897 APOMO95445 188 aa9.98□□□□□ -0.81
NPHP4-205ENST00000466897 ODF1Q14990 250 aa9.98□□□□□ -0.81
NPHP4-205ENST00000466897 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
NPHP4-205ENST00000466897 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
NPHP4-205ENST00000466897 CHAC1Q9BUX1 264 aa9.98□□□□□ -0.81
NPHP4-205ENST00000466897 A0A1B0GVY2 172 aa9.97□□□□□ -0.81
NPHP4-205ENST00000466897 MALP21145 153 aa9.97□□□□□ -0.81
NPHP4-205ENST00000466897 S100A2P29034 98 aa9.97□□□□□ -0.81
NPHP4-205ENST00000466897 SNRPEP62304 92 aaKnown RBP9.97□□□□□ -0.81
NPHP4-205ENST00000466897 OR10D4PQ8NGN7 298 aa9.97□□□□□ -0.81
NPHP4-205ENST00000466897 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
NPHP4-205ENST00000466897 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
NPHP4-205ENST00000466897 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
NPHP4-205ENST00000466897 LECT2O14960 151 aa9.96□□□□□ -0.82
NPHP4-205ENST00000466897 LINC00469Q8N7U9 141 aa9.96□□□□□ -0.82
NPHP4-205ENST00000466897 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.82
NPHP4-205ENST00000466897 HIST1H2BLQ99880 126 aa9.96□□□□□ -0.82
NPHP4-205ENST00000466897 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
NPHP4-205ENST00000466897 EPPK1P58107 5090 aaKnown RBP9.96□□□□□ -0.82
NPHP4-205ENST00000466897 PLNP26678 52 aa9.95□□□□□ -0.82
NPHP4-205ENST00000466897 CDPF1Q6NVV7 123 aa9.95□□□□□ -0.82
NPHP4-205ENST00000466897 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
NPHP4-205ENST00000466897 PKD1P98161 4303 aa9.94□□□□□ -0.82
NPHP4-205ENST00000466897 C11orf86A6NJI1 115 aa9.94□□□□□ -0.82
NPHP4-205ENST00000466897 H3BRM9 83 aa9.94□□□□□ -0.82
NPHP4-205ENST00000466897 C3orf79P0CE67 100 aa9.94□□□□□ -0.82
NPHP4-205ENST00000466897 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
NPHP4-205ENST00000466897 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
NPHP4-205ENST00000466897 H0Y8G0 127 aa9.93□□□□□ -0.82
NPHP4-205ENST00000466897 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
NPHP4-205ENST00000466897 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
NPHP4-205ENST00000466897 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
NPHP4-205ENST00000466897 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
NPHP4-205ENST00000466897 F8WDY8 70 aa9.92□□□□□ -0.82
NPHP4-205ENST00000466897 DPM2O94777 84 aa9.92□□□□□ -0.82
NPHP4-205ENST00000466897 ORAOV1Q8WV07 137 aa9.92□□□□□ -0.82
NPHP4-205ENST00000466897 ZNF561-AS1K7EIQ3 104 aa9.91□□□□□ -0.82
NPHP4-205ENST00000466897 AKR1D1P51857 326 aa9.91□□□□□ -0.82
NPHP4-205ENST00000466897 KRTDAPP60985 99 aa9.91□□□□□ -0.82
NPHP4-205ENST00000466897 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
NPHP4-205ENST00000466897 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
NPHP4-205ENST00000466897 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
NPHP4-205ENST00000466897 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 DNAH11Q96DT5 4516 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 IGLV5-39A0A0G2JS06 123 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 IGKCP01834 107 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 KRTAP10-2P60368 255 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 KIAA0087Q14695 138 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 Q8IZM0 81 aa9.9□□□□□ -0.82
NPHP4-205ENST00000466897 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.89□□□□□ -0.83
NPHP4-205ENST00000466897 C20orf202A1L168 122 aa9.89□□□□□ -0.83
NPHP4-205ENST00000466897 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
NPHP4-205ENST00000466897 HECTD4Q9Y4D8 3996 aa9.89□□□□□ -0.83
NPHP4-205ENST00000466897 IGLV5-52A0A0A0MRZ9 124 aa9.88□□□□□ -0.83
NPHP4-205ENST00000466897 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
NPHP4-205ENST00000466897 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
NPHP4-205ENST00000466897 SLPIP03973 132 aa9.87□□□□□ -0.83
NPHP4-205ENST00000466897 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
NPHP4-205ENST00000466897 PMCHL2Q9BQD1 86 aa9.87□□□□□ -0.83
NPHP4-205ENST00000466897 PRSS2P07478 247 aa9.86□□□□□ -0.83
NPHP4-205ENST00000466897 CXCL5P42830 114 aa9.86□□□□□ -0.83
NPHP4-205ENST00000466897 C9orf163Q8N9P6 203 aa9.86□□□□□ -0.83
NPHP4-205ENST00000466897 NDUFA1O15239 70 aa9.85□□□□□ -0.83
NPHP4-205ENST00000466897 SYCNQ0VAF6 134 aa9.85□□□□□ -0.83
NPHP4-205ENST00000466897 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
NPHP4-205ENST00000466897 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
NPHP4-205ENST00000466897 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
NPHP4-205ENST00000466897 CAMK2N2Q96S95 79 aa9.85□□□□□ -0.83
NPHP4-205ENST00000466897 HERVK_113P61574 105 aa9.84□□□□□ -0.83
NPHP4-205ENST00000466897 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
NPHP4-205ENST00000466897 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
NPHP4-205ENST00000466897 SFTA2Q6UW10 78 aa9.84□□□□□ -0.83
NPHP4-205ENST00000466897 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms