RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 LINC01560Q8TB33 94 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 TMEM254Q8TBM7 123 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 SCGB3A1Q96QR1 104 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 LINC00574Q9H8X3 128 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 ZNF407Q9C0G0 2248 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 ZGRF1Q86YA3 2104 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 DNAJC13O75165 2243 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 SPAG17Q6Q759 2223 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 IGLV11-55A0A075B6I3 123 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 IGLV2-18A0A075B6J9 118 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 IGHV5-10-1A0A0J9YXX1 117 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 M0R3E3 92 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 IGKV1-17P01599 117 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 TRGV3P03979 118 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 RPS27P42677 84 aaKnown RBP2.05□□□□□ -2.08
VPS13D-203ENST00000466732 ENHOQ6UWT2 76 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 LINC00322Q6ZN03 302 aaPredicted RBP2.05□□□□□ -2.08
VPS13D-203ENST00000466732 Q6ZS52 159 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 ZNF833PQ6ZTB9 187 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 AMELXQ99217 191 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 RETNLBQ9BQ08 111 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 SND1-IT1Q9HBX3 110 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 TMEM14CQ9P0S9 112 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 C22orf24Q9Y442 160 aa2.05□□□□□ -2.08
VPS13D-203ENST00000466732 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 A6NED7 52 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 PPP1R17O96001 155 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 IGLV1-51P01701 117 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 IGHV3-43DP0DP04 118 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 PRB4P10163 310 aaPredicted RBP2.04□□□□□ -2.08
VPS13D-203ENST00000466732 CACNA1DQ01668 2161 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 NREPQ16612 68 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 CASC2Q6XLA1 102 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 Q86TA4 180 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 C1orf64Q8NEQ6 169 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 DIDO1Q9BTC0 2240 aaKnown RBP2.04□□□□□ -2.08
VPS13D-203ENST00000466732 UBL5Q9BZL1 73 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 XAGE1AQ9HD64 81 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 CDC42SE2Q9NRR3 84 aa2.04□□□□□ -2.08
VPS13D-203ENST00000466732 COL4A5P29400 1685 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 TRAV10A0A0B4J240 114 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 LY6HO94772 140 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 IGLV2-23P01705 113 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 IGLV3-19P01714 112 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 CCL5P13501 91 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 C10orf128Q5T292 105 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 LYZL1Q6UWQ5 148 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 Q8N814 137 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 SDK2Q58EX2 2172 aa2.03□□□□□ -2.08
VPS13D-203ENST00000466732 KNTC1P50748 2209 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 KIAA0100Q14667 2235 aaKnown RBP2.02□□□□□ -2.09
VPS13D-203ENST00000466732 IGHV3-72A0A0B4J1Y9 119 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 TRAV12-3A0A0B4J271 114 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 B4DSR2 109 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 JMJD7-PLA2G4BH0Y9G9 81 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 LHBP01229 141 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 SAA2P0DJI9 122 aaPredicted RBP2.02□□□□□ -2.09
VPS13D-203ENST00000466732 TSPEAR-AS2P59090 65 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 ELOF1P60002 83 aaKnown RBP2.02□□□□□ -2.09
VPS13D-203ENST00000466732 MIAQ16674 131 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 B9D2Q9BPU9 175 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 PRR15LQ9BU68 103 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 C14orf132Q9NPU4 83 aa2.02□□□□□ -2.09
VPS13D-203ENST00000466732 CR1P17927 2039 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 IGKV1-6A0A0C4DH72 117 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 TFF1P04155 84 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 CTSGP08311 255 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 CCL3P10147 92 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 LYPD2Q6UXB3 125 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 WFDC9Q8NEX5 89 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 SMIM2Q9BVW6 85 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 CNFNQ9BYD5 112 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 S4R3C0 116 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 SVILO95425 2214 aa2.01□□□□□ -2.09
VPS13D-203ENST00000466732 ALPK2Q86TB3 2170 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 TRAV21A0A0B4J279 112 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 H0YGX0 51 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 PIGYQ3MUY2 71 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 KPRPQ5T749 579 aaPredicted RBP2□□□□□ -2.09
VPS13D-203ENST00000466732 C1orf134Q5TEV5 83 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 C10orf113Q5VZT2 155 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 FDCSPQ8NFU4 85 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 COX14Q96I36 57 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 Q9BRP9 147 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 LINC00467Q9BRT7 94 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 NDUFA4L2Q9NRX3 87 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 MRPL36Q9P0J6 103 aaKnown RBP2□□□□□ -2.09
VPS13D-203ENST00000466732 TNCP24821 2201 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 UNC13CQ8NB66 2214 aa2□□□□□ -2.09
VPS13D-203ENST00000466732 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 LCE6AA0A183 80 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 C17orf98A8MV24 154 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 BPY2O14599 106 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 NDUFB1O75438 58 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 CRPP02741 224 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 ROMO1P60602 79 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 PDE6HQ13956 83 aa1.99□□□□□ -2.09
VPS13D-203ENST00000466732 FAM74A4Q5TZK3 123 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms