RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 PPP1R2P9O14990 202 aa12.59□□□□□ -0.39
COL6A1-203ENST00000466285 RPL39P62891 51 aaKnown RBP12.59□□□□□ -0.39
COL6A1-203ENST00000466285 SPAG11BQ08648 103 aa12.59□□□□□ -0.39
COL6A1-203ENST00000466285 FAM168BA1KXE4 195 aa12.58□□□□□ -0.4
COL6A1-203ENST00000466285 ANAPC16Q96DE5 110 aa12.58□□□□□ -0.4
COL6A1-203ENST00000466285 CSDC2Q9Y534 153 aaKnown RBP12.58□□□□□ -0.4
COL6A1-203ENST00000466285 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
COL6A1-203ENST00000466285 RIGQ13278 110 aa12.56□□□□□ -0.4
COL6A1-203ENST00000466285 C10orf25Q5T742 122 aa12.56□□□□□ -0.4
COL6A1-203ENST00000466285 C2orf48Q96LS8 159 aa12.56□□□□□ -0.4
COL6A1-203ENST00000466285 FAM104BQ5XKR9 115 aa12.55□□□□□ -0.4
COL6A1-203ENST00000466285 NAT8BQ9UHF3 227 aa12.55□□□□□ -0.4
COL6A1-203ENST00000466285 MT-ND6P03923 174 aa12.54□□□□□ -0.4
COL6A1-203ENST00000466285 RHEBQ15382 184 aa12.54□□□□□ -0.4
COL6A1-203ENST00000466285 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
COL6A1-203ENST00000466285 CTDSP1Q9GZU7 261 aa12.54□□□□□ -0.4
COL6A1-203ENST00000466285 KRTAP7-1Q8IUC3 87 aa12.53□□□□□ -0.4
COL6A1-203ENST00000466285 ORAOV1Q8WV07 137 aa12.53□□□□□ -0.4
COL6A1-203ENST00000466285 KIR2DL4Q99706 377 aa12.53□□□□□ -0.4
COL6A1-203ENST00000466285 TIMM21Q9BVV7 248 aa12.53□□□□□ -0.4
COL6A1-203ENST00000466285 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
COL6A1-203ENST00000466285 IMMP2LQ96T52 175 aa12.52□□□□□ -0.41
COL6A1-203ENST00000466285 A0A1B0GXF2 115 aa12.51□□□□□ -0.41
COL6A1-203ENST00000466285 APOC3P02656 99 aa12.51□□□□□ -0.41
COL6A1-203ENST00000466285 SVBPQ8N300 66 aa12.51□□□□□ -0.41
COL6A1-203ENST00000466285 IGHV3OR16-9A0A0B4J2B5 98 aa12.5□□□□□ -0.41
COL6A1-203ENST00000466285 TNFRSF6BO95407 300 aa12.5□□□□□ -0.41
COL6A1-203ENST00000466285 NPYP01303 97 aa12.5□□□□□ -0.41
COL6A1-203ENST00000466285 SMIM2Q9BVW6 85 aa12.5□□□□□ -0.41
COL6A1-203ENST00000466285 C6orf48Q9UBA6 75 aa12.5□□□□□ -0.41
COL6A1-203ENST00000466285 TCAPO15273 167 aa12.49□□□□□ -0.41
COL6A1-203ENST00000466285 UNQ6190/PRO20217Q6UXQ8 127 aa12.49□□□□□ -0.41
COL6A1-203ENST00000466285 OR10D4PQ8NGN7 298 aa12.49□□□□□ -0.41
COL6A1-203ENST00000466285 TRBV24-1A0A075B6N3 115 aa12.48□□□□□ -0.41
COL6A1-203ENST00000466285 D6R8Y8 96 aa12.48□□□□□ -0.41
COL6A1-203ENST00000466285 SNAPINO95295 136 aa12.48□□□□□ -0.41
COL6A1-203ENST00000466285 MRPL54Q6P161 138 aaKnown RBP12.48□□□□□ -0.41
COL6A1-203ENST00000466285 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-203ENST00000466285 MRPL35Q9NZE8 188 aaKnown RBP12.48□□□□□ -0.41
COL6A1-203ENST00000466285 A0A1B0GW15 77 aa12.47□□□□□ -0.41
COL6A1-203ENST00000466285 PPP1R17O96001 155 aa12.47□□□□□ -0.41
COL6A1-203ENST00000466285 IGLV7-43P04211 117 aa12.47□□□□□ -0.41
COL6A1-203ENST00000466285 CKS2P33552 79 aa12.47□□□□□ -0.41
COL6A1-203ENST00000466285 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
COL6A1-203ENST00000466285 RNF151Q2KHN1 245 aa12.47□□□□□ -0.41
COL6A1-203ENST00000466285 ATP5L2Q7Z4Y8 100 aa12.47□□□□□ -0.41
COL6A1-203ENST00000466285 C20orf78Q9BR46 151 aa12.47□□□□□ -0.41
COL6A1-203ENST00000466285 TRAV9-1A0A075B6T8 112 aa12.46□□□□□ -0.41
COL6A1-203ENST00000466285 IFITM10A6NMD0 228 aa12.46□□□□□ -0.41
COL6A1-203ENST00000466285 KRTAP1-4P0C5Y4 121 aa12.44□□□□□ -0.42
COL6A1-203ENST00000466285 SMAGPQ0VAQ4 97 aa12.44□□□□□ -0.42
COL6A1-203ENST00000466285 KIAA0087Q14695 138 aa12.44□□□□□ -0.42
COL6A1-203ENST00000466285 RPS10P5Q9NQ39 176 aa12.44□□□□□ -0.42
COL6A1-203ENST00000466285 SPANXA1Q9NS26 97 aa12.44□□□□□ -0.42
COL6A1-203ENST00000466285 NDUFA1O15239 70 aa12.43□□□□□ -0.42
COL6A1-203ENST00000466285 HBBP68871 147 aa12.43□□□□□ -0.42
COL6A1-203ENST00000466285 MRPS36P82909 103 aaKnown RBP12.43□□□□□ -0.42
COL6A1-203ENST00000466285 GAGE2EQ4V326 116 aa12.43□□□□□ -0.42
COL6A1-203ENST00000466285 TMEM18Q96B42 140 aa12.43□□□□□ -0.42
COL6A1-203ENST00000466285 GAGE2DQ9UEU5 116 aa12.43□□□□□ -0.42
COL6A1-203ENST00000466285 A0A087WZ39 114 aa12.42□□□□□ -0.42
COL6A1-203ENST00000466285 H0Y9J4 135 aa12.42□□□□□ -0.42
COL6A1-203ENST00000466285 ZC2HC1BQ5TFG8 222 aa12.42□□□□□ -0.42
COL6A1-203ENST00000466285 C2orf82Q6UX34 121 aa12.42□□□□□ -0.42
COL6A1-203ENST00000466285 YPEL4Q96NS1 127 aa12.42□□□□□ -0.42
COL6A1-203ENST00000466285 TLX1NBP0CAT3 122 aa12.41□□□□□ -0.42
COL6A1-203ENST00000466285 IGLV4-3A0A075B6K6 122 aa12.4□□□□□ -0.42
COL6A1-203ENST00000466285 S100A8P05109 93 aa12.4□□□□□ -0.42
COL6A1-203ENST00000466285 LINC00242Q5T6M2 205 aa12.4□□□□□ -0.42
COL6A1-203ENST00000466285 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
COL6A1-203ENST00000466285 DIRC1Q969H9 104 aa12.39□□□□□ -0.43
COL6A1-203ENST00000466285 M0QXV9 152 aa12.38□□□□□ -0.43
COL6A1-203ENST00000466285 MUC2Q02817 5179 aa12.37□□□□□ -0.43
COL6A1-203ENST00000466285 S100PP25815 95 aa12.37□□□□□ -0.43
COL6A1-203ENST00000466285 LINC00173Q6ZV60 143 aa12.37□□□□□ -0.43
COL6A1-203ENST00000466285 TMEM136Q6ZRR5 245 aa12.36□□□□□ -0.43
COL6A1-203ENST00000466285 TGIF2-C20orf24A0A0A6YYL0 155 aa12.35□□□□□ -0.43
COL6A1-203ENST00000466285 F8WDY8 70 aa12.34□□□□□ -0.43
COL6A1-203ENST00000466285 PRELID3AQ96N28 172 aa12.34□□□□□ -0.43
COL6A1-203ENST00000466285 IFI27P40305 119 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-203ENST00000466285 UBE2D1P51668 147 aa12.33□□□□□ -0.44
COL6A1-203ENST00000466285 CBLN2Q8IUK8 224 aa12.32□□□□□ -0.44
COL6A1-203ENST00000466285 ORMDL3Q8N138 153 aa12.32□□□□□ -0.44
COL6A1-203ENST00000466285 GNB1LQ9BYB4 327 aa12.32□□□□□ -0.44
COL6A1-203ENST00000466285 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
COL6A1-203ENST00000466285 LOC389332A0A1B0GUA5 103 aa12.31□□□□□ -0.44
COL6A1-203ENST00000466285 UBE2BP63146 152 aa12.31□□□□□ -0.44
COL6A1-203ENST00000466285 COX19Q49B96 90 aa12.31□□□□□ -0.44
COL6A1-203ENST00000466285 PYGO1Q9Y3Y4 419 aa12.31□□□□□ -0.44
COL6A1-203ENST00000466285 NDUFC2-KCTD14E9PQ53 114 aa12.3□□□□□ -0.44
COL6A1-203ENST00000466285 ATP6V1G1O75348 118 aa12.3□□□□□ -0.44
COL6A1-203ENST00000466285 PPBPP02775 128 aa12.3□□□□□ -0.44
COL6A1-203ENST00000466285 LINC00469Q8N7U9 141 aa12.3□□□□□ -0.44
COL6A1-203ENST00000466285 TMEM141Q96I45 108 aa12.3□□□□□ -0.44
COL6A1-203ENST00000466285 IGLV1-50A0A075B6I6 118 aa12.29□□□□□ -0.44
COL6A1-203ENST00000466285 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
COL6A1-203ENST00000466285 RAB5AP20339 215 aa12.28□□□□□ -0.44
COL6A1-203ENST00000466285 S100A1P23297 94 aa12.27□□□□□ -0.45
COL6A1-203ENST00000466285 PRSS47A8MTI9 375 aa12.26□□□□□ -0.45
COL6A1-203ENST00000466285 TEX43Q6ZNM6 134 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms