RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 H3BRM9 83 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 VCYO14598 125 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 HERVK_113P61574 105 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 VAMP3Q15836 100 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 TOMM6Q96B49 74 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 KIR2DL4Q99706 377 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 DNAH11Q96DT5 4516 aa6.55□□□□□ -1.36
RTFDC1-205ENST00000466260 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
RTFDC1-205ENST00000466260 KRTAP10-2P60368 255 aa6.55□□□□□ -1.36
RTFDC1-205ENST00000466260 SCGB3A1Q96QR1 104 aa6.55□□□□□ -1.36
RTFDC1-205ENST00000466260 CYSLTR1Q9Y271 337 aa6.55□□□□□ -1.36
RTFDC1-205ENST00000466260 CBY1Q9Y3M2 126 aa6.55□□□□□ -1.36
RTFDC1-205ENST00000466260 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
RTFDC1-205ENST00000466260 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
RTFDC1-205ENST00000466260 TRBV6-5A0A0K0K1A5 114 aa6.54□□□□□ -1.36
RTFDC1-205ENST00000466260 IBA57-AS1B1ANH7 110 aa6.54□□□□□ -1.36
RTFDC1-205ENST00000466260 FGF6P10767 208 aa6.54□□□□□ -1.36
RTFDC1-205ENST00000466260 NMUP48645 174 aa6.54□□□□□ -1.36
RTFDC1-205ENST00000466260 CHCHD5Q9BSY4 110 aa6.54□□□□□ -1.36
RTFDC1-205ENST00000466260 KLK12Q9UKR0 248 aa6.54□□□□□ -1.36
RTFDC1-205ENST00000466260 A0A087WTM6 91 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 TRBV6-8A0A0A6YYG3 113 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 K7EP13 123 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 M0QY20 66 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 NPSP0C0P6 89 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 C2orf91Q6ZV80 131 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 DNAJC30Q96LL9 226 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
RTFDC1-205ENST00000466260 TAX1BP3O14907 124 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 LECT2O14960 151 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 GAGE6Q13070 117 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 ZC2HC1BQ5TFG8 222 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 CLPSL2Q6UWE3 100 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 NTM-AS1Q6ZSK4 140 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 UBE2WQ96B02 151 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 RPL39LQ96EH5 51 aaKnown RBP6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 CHTOPQ9Y3Y2 248 aaKnown RBP6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
RTFDC1-205ENST00000466260 TRBV25-1A0A075B6N4 114 aa6.51□□□□□ -1.37
RTFDC1-205ENST00000466260 IGKV2D-24A0A075B6R9 120 aa6.51□□□□□ -1.37
RTFDC1-205ENST00000466260 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
RTFDC1-205ENST00000466260 C9orf118A6NHY6 69 aa6.51□□□□□ -1.37
RTFDC1-205ENST00000466260 SMIM13P0DJ93 91 aa6.51□□□□□ -1.37
RTFDC1-205ENST00000466260 C2orf66Q6UXQ4 117 aa6.51□□□□□ -1.37
RTFDC1-205ENST00000466260 TRAV8-3A0A0A6YYJ7 113 aa6.5□□□□□ -1.37
RTFDC1-205ENST00000466260 CRPP02741 224 aa6.5□□□□□ -1.37
RTFDC1-205ENST00000466260 ANGP03950 147 aaKnown RBP6.5□□□□□ -1.37
RTFDC1-205ENST00000466260 SMAGPQ0VAQ4 97 aa6.5□□□□□ -1.37
RTFDC1-205ENST00000466260 CHAC1Q9BUX1 264 aa6.5□□□□□ -1.37
RTFDC1-205ENST00000466260 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
RTFDC1-205ENST00000466260 MRPL35Q9NZE8 188 aaKnown RBP6.5□□□□□ -1.37
RTFDC1-205ENST00000466260 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
RTFDC1-205ENST00000466260 E9PLD3 99 aa6.49□□□□□ -1.37
RTFDC1-205ENST00000466260 FABP2P12104 132 aa6.49□□□□□ -1.37
RTFDC1-205ENST00000466260 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
RTFDC1-205ENST00000466260 WFDC2Q14508 124 aa6.49□□□□□ -1.37
RTFDC1-205ENST00000466260 PMVKQ15126 192 aa6.49□□□□□ -1.37
RTFDC1-205ENST00000466260 LYRM7Q5U5X0 104 aa6.49□□□□□ -1.37
RTFDC1-205ENST00000466260 LRP1BQ9NZR2 4599 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 K7ERU9 68 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 UBE2L6O14933 153 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 GAS8-AS1O95177 125 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 COTL1Q14019 142 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 BAALCQ8WXS3 180 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 RMI2Q96E14 147 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 CHCHD7Q9BUK0 85 aa6.48□□□□□ -1.37
RTFDC1-205ENST00000466260 IGLV5-52A0A0A0MRZ9 124 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 MYMXA0A1B0GTQ4 84 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 LRCOL1A6NCL2 159 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 I3L3M4 83 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 CCL25O15444 150 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 RBX1P62877 108 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 XP32Q5T750 250 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 CEND1Q8N111 149 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 Q8N814 137 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 TMEM243Q9BU79 118 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 KIAA1109Q2LD37 5005 aa6.47□□□□□ -1.37
RTFDC1-205ENST00000466260 C11orf86A6NJI1 115 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 K7EP34 96 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 GCSHP23434 173 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 C21orf62-AS1Q17RA5 79 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 AMMECR1LQ6DCA0 310 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 ENHOQ6UWT2 76 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 PCP2Q8IVA1 136 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 HIST1H4GQ99525 98 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
RTFDC1-205ENST00000466260 HERC2O95714 4834 aa6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 IGLV4-60A0A075B6I1 120 aa6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 IGLV10-54A0A075B6I4 117 aa6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 IGKV3OR2-268A0A0C4DH90 116 aa6.45□□□□□ -1.38
RTFDC1-205ENST00000466260 A0A1W2PPM0 123 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms