RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 A4D1N5 150 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 IGHV3-30-3P0DP02 117 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 DAD1P61803 113 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 FAM104AQ969W3 186 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 UBE2D4Q9Y2X8 147 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 IGHV1-58A0A0C4DH39 117 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 A0A0J9YXY3 114 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 LOC100131303A0A0U1RQF7 123 aa13.07□□□□□ -0.32
CAPN3-209ENST00000466222 TRGV4A0A0C4DH28 118 aa13.06□□□□□ -0.32
CAPN3-209ENST00000466222 SMCPP49901 116 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-209ENST00000466222 TCL1BO95988 128 aa13.05□□□□□ -0.32
CAPN3-209ENST00000466222 FOXI1Q12951 378 aa13.05□□□□□ -0.32
CAPN3-209ENST00000466222 M0QXV9 152 aa13.05□□□□□ -0.32
CAPN3-209ENST00000466222 IGHV3-33P01772 117 aa13.05□□□□□ -0.32
CAPN3-209ENST00000466222 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
CAPN3-209ENST00000466222 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
CAPN3-209ENST00000466222 ERG28Q9UKR5 140 aa13.05□□□□□ -0.32
CAPN3-209ENST00000466222 IGHV3-64A0A075B6Q5 118 aa13.04□□□□□ -0.32
CAPN3-209ENST00000466222 SPANXDQ9BXN6 97 aa13.04□□□□□ -0.32
CAPN3-209ENST00000466222 SPANXCQ9NY87 97 aa13.04□□□□□ -0.32
CAPN3-209ENST00000466222 SCGB1C2P0DMR2 95 aa13.03□□□□□ -0.32
CAPN3-209ENST00000466222 HTN3P15516 51 aa13.03□□□□□ -0.32
CAPN3-209ENST00000466222 C11orf68Q9H3H3 251 aaKnown RBP13.03□□□□□ -0.32
CAPN3-209ENST00000466222 K7EQD1 137 aa13.03□□□□□ -0.32
CAPN3-209ENST00000466222 TEN1Q86WV5 123 aa13.03□□□□□ -0.32
CAPN3-209ENST00000466222 B9D2Q9BPU9 175 aa13.03□□□□□ -0.32
CAPN3-209ENST00000466222 PPDPFLQ8WWR9 84 aa13.02□□□□□ -0.32
CAPN3-209ENST00000466222 VSIG2Q96IQ7 327 aa13.02□□□□□ -0.32
CAPN3-209ENST00000466222 NACAE9PAV3 2078 aa13.02□□□□□ -0.33
CAPN3-209ENST00000466222 IGHV3-38A0A0C4DH36 116 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 GAGE12JA6NER3 117 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 TIRAPP58753 221 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 NANOS2P60321 138 aaKnown RBP13.01□□□□□ -0.33
CAPN3-209ENST00000466222 GAGE4Q13068 117 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 GAGE5Q13069 117 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 Q6ZTC4 211 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 TIMM17BO60830 172 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 SFTA2Q6UW10 78 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 LITAFQ99732 161 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 NDUFA12Q9UI09 145 aa13.01□□□□□ -0.33
CAPN3-209ENST00000466222 CEMP1Q6PRD7 247 aaPredicted RBP13□□□□□ -0.33
CAPN3-209ENST00000466222 GEMIN7Q9H840 131 aaKnown RBP13□□□□□ -0.33
CAPN3-209ENST00000466222 FBN3Q75N90 2809 aa13□□□□□ -0.33
CAPN3-209ENST00000466222 IGLV5-45A0A087WSX0 123 aa13□□□□□ -0.33
CAPN3-209ENST00000466222 TRBV6-4A0A1B0GX49 114 aa13□□□□□ -0.33
CAPN3-209ENST00000466222 F5H768 121 aa13□□□□□ -0.33
CAPN3-209ENST00000466222 ATP5G1P05496 136 aa13□□□□□ -0.33
CAPN3-209ENST00000466222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-209ENST00000466222 IGKV2-29A2NJV5 120 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-209ENST00000466222 ZFAND6Q6FIF0 208 aa12.99□□□□□ -0.33
CAPN3-209ENST00000466222 Q6ZUT4 128 aa12.99□□□□□ -0.33
CAPN3-209ENST00000466222 GTSF1LQ9H1H1 148 aa12.99□□□□□ -0.33
CAPN3-209ENST00000466222 TRBV10-1A0A0K0K1A3 114 aa12.98□□□□□ -0.33
CAPN3-209ENST00000466222 EIF4EBP3O60516 100 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-209ENST00000466222 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
CAPN3-209ENST00000466222 MIAQ16674 131 aa12.98□□□□□ -0.33
CAPN3-209ENST00000466222 C11orf45Q8TAV5 145 aa12.98□□□□□ -0.33
CAPN3-209ENST00000466222 STAB2Q8WWQ8 2551 aa12.98□□□□□ -0.33
CAPN3-209ENST00000466222 TRAV8-3A0A0A6YYJ7 113 aa12.98□□□□□ -0.33
CAPN3-209ENST00000466222 TRBV30A0A0K0K1B3 111 aa12.97□□□□□ -0.33
CAPN3-209ENST00000466222 CIDEAO60543 219 aa12.97□□□□□ -0.33
CAPN3-209ENST00000466222 IFITM1P13164 125 aa12.97□□□□□ -0.33
CAPN3-209ENST00000466222 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
CAPN3-209ENST00000466222 TRAV26-1A0A087WT03 109 aa12.96□□□□□ -0.33
CAPN3-209ENST00000466222 ATXN8Q156A1 80 aa12.96□□□□□ -0.33
CAPN3-209ENST00000466222 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.33
CAPN3-209ENST00000466222 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
CAPN3-209ENST00000466222 A0A096LPF7 62 aa12.96□□□□□ -0.34
CAPN3-209ENST00000466222 GYPEP15421 78 aa12.96□□□□□ -0.34
CAPN3-209ENST00000466222 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.34
CAPN3-209ENST00000466222 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.34
CAPN3-209ENST00000466222 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
CAPN3-209ENST00000466222 Q1RN00 199 aa12.95□□□□□ -0.34
CAPN3-209ENST00000466222 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
CAPN3-209ENST00000466222 CSDC2Q9Y534 153 aaKnown RBP12.95□□□□□ -0.34
CAPN3-209ENST00000466222 PAX4O43316 350 aa12.94□□□□□ -0.34
CAPN3-209ENST00000466222 SPINK8P0C7L1 97 aa12.94□□□□□ -0.34
CAPN3-209ENST00000466222 HERVK_113P63121 156 aa12.94□□□□□ -0.34
CAPN3-209ENST00000466222 NDUFA1O15239 70 aa12.94□□□□□ -0.34
CAPN3-209ENST00000466222 SLC25A20O43772 301 aa12.94□□□□□ -0.34
CAPN3-209ENST00000466222 DAZ4Q86SG3 579 aaKnown RBP12.94□□□□□ -0.34
CAPN3-209ENST00000466222 DAZ3Q9NR90 486 aaKnown RBP12.94□□□□□ -0.34
CAPN3-209ENST00000466222 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
CAPN3-209ENST00000466222 PRSS2P07478 247 aa12.92□□□□□ -0.34
CAPN3-209ENST00000466222 ANKRD29Q8N6D5 301 aa12.92□□□□□ -0.34
CAPN3-209ENST00000466222 CIRBPQ14011 172 aaKnown RBP12.91□□□□□ -0.34
CAPN3-209ENST00000466222 ADAMTSL4-AS1Q5T5F5 129 aa12.91□□□□□ -0.34
CAPN3-209ENST00000466222 NTM-AS1Q6ZSK4 140 aa12.91□□□□□ -0.34
CAPN3-209ENST00000466222 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
CAPN3-209ENST00000466222 IGLV5-39A0A0G2JS06 123 aa12.9□□□□□ -0.34
CAPN3-209ENST00000466222 C9JAW5 83 aa12.9□□□□□ -0.34
CAPN3-209ENST00000466222 TMEM262E9PQX1 116 aa12.9□□□□□ -0.34
CAPN3-209ENST00000466222 H7C2G1 150 aa12.9□□□□□ -0.34
CAPN3-209ENST00000466222 LINC00694P0DN24 101 aa12.9□□□□□ -0.34
CAPN3-209ENST00000466222 CDIP1Q9H305 208 aa12.9□□□□□ -0.34
CAPN3-209ENST00000466222 COX6CP09669 75 aa12.9□□□□□ -0.35
CAPN3-209ENST00000466222 LINC01620Q4KN68 170 aa12.9□□□□□ -0.35
CAPN3-209ENST00000466222 COPS9Q8WXC6 57 aa12.9□□□□□ -0.35
CAPN3-209ENST00000466222 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
CAPN3-209ENST00000466222 TMEM101Q96IK0 257 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms