RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 PKD1P98161 4303 aa11.96□□□□□ -0.49
PCCB-207ENST00000466072 PTTG1IPP53801 180 aa11.96□□□□□ -0.49
PCCB-207ENST00000466072 TMEM170BQ5T4T1 132 aa11.96□□□□□ -0.49
PCCB-207ENST00000466072 CEND1Q8N111 149 aa11.96□□□□□ -0.49
PCCB-207ENST00000466072 ATP6V0E2Q8NHE4 81 aa11.96□□□□□ -0.49
PCCB-207ENST00000466072 FXYD2P54710 66 aa11.95□□□□□ -0.5
PCCB-207ENST00000466072 C6orf223Q8N319 242 aa11.95□□□□□ -0.5
PCCB-207ENST00000466072 TM2D2Q9BX73 214 aa11.95□□□□□ -0.5
PCCB-207ENST00000466072 ZNF815PA8K554 130 aa11.95□□□□□ -0.5
PCCB-207ENST00000466072 COTL1Q14019 142 aa11.95□□□□□ -0.5
PCCB-207ENST00000466072 C9orf118A6NHY6 69 aa11.94□□□□□ -0.5
PCCB-207ENST00000466072 CCL25O15444 150 aa11.94□□□□□ -0.5
PCCB-207ENST00000466072 SH2D6Q7Z4S9 175 aa11.94□□□□□ -0.5
PCCB-207ENST00000466072 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
PCCB-207ENST00000466072 IGHV3-38A0A0C4DH36 116 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 A0A1B0GVY2 172 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 AMELXQ99217 191 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 HIST1H4GQ99525 98 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 GTSF1LQ9H1H1 148 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 TRBV10-1A0A0K0K1A3 114 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 SMIM13P0DJ93 91 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 TIRAPP58753 221 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 TNP2Q05952 138 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 LINC00336Q6ZUF6 198 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 Q8N3U1 123 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 FAM104AQ969W3 186 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 UBE2D4Q9Y2X8 147 aa11.93□□□□□ -0.5
PCCB-207ENST00000466072 DNAH11Q96DT5 4516 aa11.92□□□□□ -0.5
PCCB-207ENST00000466072 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
PCCB-207ENST00000466072 K7EP13 123 aa11.92□□□□□ -0.5
PCCB-207ENST00000466072 TTC32Q5I0X7 151 aa11.92□□□□□ -0.5
PCCB-207ENST00000466072 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
PCCB-207ENST00000466072 PKHD1P08F94 4074 aa11.92□□□□□ -0.5
PCCB-207ENST00000466072 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.91□□□□□ -0.5
PCCB-207ENST00000466072 A0A0J9YXV3 536 aa11.91□□□□□ -0.5
PCCB-207ENST00000466072 TMEM223A0PJW6 202 aa11.91□□□□□ -0.5
PCCB-207ENST00000466072 IGKV2-29A2NJV5 120 aaPredicted RBP11.91□□□□□ -0.5
PCCB-207ENST00000466072 ZNF22P17026 224 aaPredicted RBP11.91□□□□□ -0.5
PCCB-207ENST00000466072 RPL36AP83881 106 aaKnown RBP11.91□□□□□ -0.5
PCCB-207ENST00000466072 RPL36ALQ969Q0 106 aaKnown RBP11.91□□□□□ -0.5
PCCB-207ENST00000466072 RAB37Q96AX2 223 aa11.91□□□□□ -0.5
PCCB-207ENST00000466072 PLEKHB2Q96CS7 222 aa11.9□□□□□ -0.5
PCCB-207ENST00000466072 DNAH10OSP0CZ25 163 aa11.9□□□□□ -0.5
PCCB-207ENST00000466072 LELP1Q5T871 98 aa11.9□□□□□ -0.5
PCCB-207ENST00000466072 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.5
PCCB-207ENST00000466072 TSPEAR-AS2P59090 65 aa11.89□□□□□ -0.51
PCCB-207ENST00000466072 H3BUT2 72 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 LEPROTO15243 131 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 UBE2D3P61077 147 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 UBE2D2P62837 147 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 NHP2Q9NX24 153 aaKnown RBP11.88□□□□□ -0.51
PCCB-207ENST00000466072 J3QQQ9 107 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 IGHV3-30-3P0DP02 117 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
PCCB-207ENST00000466072 LGALS3P17931 250 aaKnown RBP11.88□□□□□ -0.51
PCCB-207ENST00000466072 MRPS36P82909 103 aaKnown RBP11.88□□□□□ -0.51
PCCB-207ENST00000466072 Q6ZRN7 208 aaPredicted RBP11.88□□□□□ -0.51
PCCB-207ENST00000466072 Q6ZUT4 128 aa11.87□□□□□ -0.51
PCCB-207ENST00000466072 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
PCCB-207ENST00000466072 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
PCCB-207ENST00000466072 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
PCCB-207ENST00000466072 K7ERJ3 54 aa11.86□□□□□ -0.51
PCCB-207ENST00000466072 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
PCCB-207ENST00000466072 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
PCCB-207ENST00000466072 LINC01556Q5JQF7 62 aa11.86□□□□□ -0.51
PCCB-207ENST00000466072 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
PCCB-207ENST00000466072 DYNC1H1Q14204 4646 aaKnown RBP11.85□□□□□ -0.51
PCCB-207ENST00000466072 A0A1W2PPM0 123 aa11.84□□□□□ -0.51
PCCB-207ENST00000466072 GAGE10A6NGK3 116 aa11.83□□□□□ -0.51
PCCB-207ENST00000466072 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.51
PCCB-207ENST00000466072 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.51
PCCB-207ENST00000466072 OR5A1Q8NGJ0 315 aa11.83□□□□□ -0.51
PCCB-207ENST00000466072 SPANXB1Q9NS25 103 aaPredicted RBP11.83□□□□□ -0.51
PCCB-207ENST00000466072 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
PCCB-207ENST00000466072 NTM-AS1Q6ZSK4 140 aa11.83□□□□□ -0.52
PCCB-207ENST00000466072 GTF2H5Q6ZYL4 71 aa11.83□□□□□ -0.52
PCCB-207ENST00000466072 A0A1B0GWB2 263 aa11.82□□□□□ -0.52
PCCB-207ENST00000466072 K7EP34 96 aa11.82□□□□□ -0.52
PCCB-207ENST00000466072 UBE2D1P51668 147 aa11.81□□□□□ -0.52
PCCB-207ENST00000466072 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
PCCB-207ENST00000466072 A6NJY4 79 aa11.81□□□□□ -0.52
PCCB-207ENST00000466072 FABP2P12104 132 aa11.81□□□□□ -0.52
PCCB-207ENST00000466072 SMAGPQ0VAQ4 97 aa11.81□□□□□ -0.52
PCCB-207ENST00000466072 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
PCCB-207ENST00000466072 IBA57-AS1B1ANH7 110 aa11.79□□□□□ -0.52
PCCB-207ENST00000466072 GEMIN7Q9H840 131 aaKnown RBP11.79□□□□□ -0.52
PCCB-207ENST00000466072 Q9HAA7 133 aa11.79□□□□□ -0.52
PCCB-207ENST00000466072 CSDC2Q9Y534 153 aaKnown RBP11.79□□□□□ -0.52
PCCB-207ENST00000466072 TRBV6-8A0A0A6YYG3 113 aa11.79□□□□□ -0.52
PCCB-207ENST00000466072 FUSP35637 526 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCCB-207ENST00000466072 SPCS1Q9Y6A9 102 aa11.79□□□□□ -0.52
PCCB-207ENST00000466072 C10orf126Q8N4M7 172 aa11.78□□□□□ -0.52
PCCB-207ENST00000466072 TMEM243Q9BU79 118 aa11.78□□□□□ -0.52
PCCB-207ENST00000466072 TRAV8-3A0A0A6YYJ7 113 aa11.77□□□□□ -0.52
PCCB-207ENST00000466072 KIAA1109Q2LD37 5005 aa11.77□□□□□ -0.53
PCCB-207ENST00000466072 IGLV5-45A0A087WSX0 123 aa11.76□□□□□ -0.53
PCCB-207ENST00000466072 KRTAP10-2P60368 255 aa11.76□□□□□ -0.53
PCCB-207ENST00000466072 UBE2L6O14933 153 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms