RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 ENHOQ6UWT2 76 aa4.17□□□□□ -1.74
TPM3-214ENST00000466010 FAM231DQ6ZW35 169 aa4.17□□□□□ -1.74
TPM3-214ENST00000466010 C7orf33Q8WU49 177 aa4.17□□□□□ -1.74
TPM3-214ENST00000466010 HLA-DQA1P01909 254 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 NKX2-5P52952 324 aaPredicted RBP4.16□□□□□ -1.74
TPM3-214ENST00000466010 REG3AQ06141 175 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 WFDC2Q14508 124 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 TAL2Q16559 108 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 TEX43Q6ZNM6 134 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 NTM-AS1Q6ZSK4 140 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 LINC00269Q8N2A0 174 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 CHAC1Q9BUX1 264 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 GFRA4Q9GZZ7 299 aa4.16□□□□□ -1.74
TPM3-214ENST00000466010 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.15□□□□□ -1.75
TPM3-214ENST00000466010 PPP1R17O96001 155 aa4.15□□□□□ -1.75
TPM3-214ENST00000466010 SMR3BP02814 79 aaPredicted RBP4.15□□□□□ -1.75
TPM3-214ENST00000466010 ZNF25P17030 456 aaPredicted RBP4.15□□□□□ -1.75
TPM3-214ENST00000466010 PFN2P35080 140 aa4.15□□□□□ -1.75
TPM3-214ENST00000466010 FOXA3P55318 350 aaPredicted RBP4.15□□□□□ -1.75
TPM3-214ENST00000466010 ALKAL2Q6UX46 152 aa4.15□□□□□ -1.75
TPM3-214ENST00000466010 DEFB104AQ8WTQ1 72 aa4.15□□□□□ -1.75
TPM3-214ENST00000466010 EIF5A2Q9GZV4 153 aaKnown RBP4.15□□□□□ -1.75
TPM3-214ENST00000466010 RNASE7Q9H1E1 156 aaKnown RBP4.15□□□□□ -1.75
TPM3-214ENST00000466010 PKIGQ9Y2B9 76 aa4.15□□□□□ -1.75
TPM3-214ENST00000466010 K7EN84 100 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 OXTP01178 125 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 CNBPP62633 177 aaKnown RBP4.14□□□□□ -1.75
TPM3-214ENST00000466010 SMAGPQ0VAQ4 97 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 AMMECR1LQ6DCA0 310 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 TSKUQ8WUA8 353 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 SMIM7Q9BQ49 75 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 SMDT1Q9H4I9 107 aa4.14□□□□□ -1.75
TPM3-214ENST00000466010 TRBV6-5A0A0K0K1A5 114 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 A0A1B0GUT8 65 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 ZNF727A8MUV8 499 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 I3L3M4 83 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 APCSP02743 223 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 CEBPGP53567 150 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 RPL18AQ02543 176 aaKnown RBP4.13□□□□□ -1.75
TPM3-214ENST00000466010 LINC01551Q86U37 167 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 C9orf163Q8N9P6 203 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 GATD1Q8NB37 220 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 C20orf203Q8NBC4 194 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 MRAP2Q96G30 205 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 TMEM101Q96IK0 257 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 BTF3L4Q96K17 158 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 OSTCQ9NRP0 149 aa4.13□□□□□ -1.75
TPM3-214ENST00000466010 SDHAF1A6NFY7 115 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 HIGD1CA8MV81 97 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 CLPSL2Q6UWE3 100 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 CIRBP-AS1Q8TBR5 109 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 RNF185Q96GF1 192 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 TMEM191AQ9H0A3 160 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 ST20Q9HBF5 79 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 NAT8BQ9UHF3 227 aa4.12□□□□□ -1.75
TPM3-214ENST00000466010 FLG2Q5D862 2391 aaPredicted RBP4.12□□□□□ -1.75
TPM3-214ENST00000466010 IGLV4-60A0A075B6I1 120 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 IGLV10-54A0A075B6I4 117 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 IGHV3-64A0A075B6Q5 118 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 TRAV26-2A0A0B4J265 109 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 TCAPO15273 167 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 CCL25O15444 150 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 S100A8P05109 93 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 S100A6P06703 90 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 HAMPP81172 84 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 TMEM241Q24JQ0 296 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 KRTAP26-1Q6PEX3 210 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 LINC00173Q6ZV60 143 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 TYMSOSQ8TAI1 123 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 LINC00474Q9P2X8 69 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 MYCBP2O75592 4640 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
TPM3-214ENST00000466010 TRBV27A0A0K0K1C4 114 aa4.1□□□□□ -1.75
TPM3-214ENST00000466010 FGF6P10767 208 aa4.1□□□□□ -1.75
TPM3-214ENST00000466010 CIRBPQ14011 172 aaKnown RBP4.1□□□□□ -1.75
TPM3-214ENST00000466010 PEA15Q15121 130 aa4.1□□□□□ -1.75
TPM3-214ENST00000466010 SDIM1Q6ZPB5 146 aa4.1□□□□□ -1.75
TPM3-214ENST00000466010 MRPL52Q86TS9 123 aaKnown RBP4.1□□□□□ -1.75
TPM3-214ENST00000466010 OR5A1Q8NGJ0 315 aa4.1□□□□□ -1.75
TPM3-214ENST00000466010 C7orf77A4D0Y5 90 aa4.09□□□□□ -1.75
TPM3-214ENST00000466010 LINC00862A6NCI5 91 aa4.09□□□□□ -1.75
TPM3-214ENST00000466010 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
TPM3-214ENST00000466010 SRP19P09132 144 aaKnown RBP4.09□□□□□ -1.75
TPM3-214ENST00000466010 FCER1GP30273 86 aa4.09□□□□□ -1.75
TPM3-214ENST00000466010 RPS10P46783 165 aaKnown RBP4.09□□□□□ -1.75
TPM3-214ENST00000466010 PRR3P79522 188 aaKnown RBP4.09□□□□□ -1.75
TPM3-214ENST00000466010 SS18Q15532 418 aa4.09□□□□□ -1.75
TPM3-214ENST00000466010 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
TPM3-214ENST00000466010 RPL39LQ96EH5 51 aaKnown RBP4.09□□□□□ -1.75
TPM3-214ENST00000466010 NAT8Q9UHE5 227 aa4.09□□□□□ -1.75
TPM3-214ENST00000466010 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.08□□□□□ -1.76
TPM3-214ENST00000466010 GVQW2A0A096LPI5 108 aaPredicted RBP4.08□□□□□ -1.76
TPM3-214ENST00000466010 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
TPM3-214ENST00000466010 SMIM27A0A1W2PRY6 76 aa4.08□□□□□ -1.76
TPM3-214ENST00000466010 IGKV2-29A2NJV5 120 aaPredicted RBP4.08□□□□□ -1.76
TPM3-214ENST00000466010 C1orf196B1AJZ1 125 aa4.08□□□□□ -1.76
TPM3-214ENST00000466010 F8W036 122 aa4.08□□□□□ -1.76
TPM3-214ENST00000466010 KRTAP4-16G5E9R7 235 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms