RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 C3orf22Q8N5N4 141 aa8.42□□□□□ -1.06
NCSTN-210ENST00000465223 LINC00469Q8N7U9 141 aa8.42□□□□□ -1.06
NCSTN-210ENST00000465223 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
NCSTN-210ENST00000465223 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
NCSTN-210ENST00000465223 CSDC2Q9Y534 153 aaKnown RBP8.42□□□□□ -1.06
NCSTN-210ENST00000465223 BORCS7-ASMTA0A0B4J1R7 106 aa8.41□□□□□ -1.06
NCSTN-210ENST00000465223 IGHV3OR16-9A0A0B4J2B5 98 aa8.41□□□□□ -1.06
NCSTN-210ENST00000465223 M0R2T5 61 aa8.41□□□□□ -1.06
NCSTN-210ENST00000465223 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
NCSTN-210ENST00000465223 TEX261Q6UWH6 196 aa8.41□□□□□ -1.06
NCSTN-210ENST00000465223 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
NCSTN-210ENST00000465223 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
NCSTN-210ENST00000465223 KRTAP13-1Q8IUC0 172 aa8.4□□□□□ -1.06
NCSTN-210ENST00000465223 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
NCSTN-210ENST00000465223 MRPL55Q7Z7F7 128 aaKnown RBP8.39□□□□□ -1.07
NCSTN-210ENST00000465223 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
NCSTN-210ENST00000465223 MARVELD1Q9BSK0 173 aa8.39□□□□□ -1.07
NCSTN-210ENST00000465223 XAGE1AQ9HD64 81 aa8.39□□□□□ -1.07
NCSTN-210ENST00000465223 RAB19A4D1S5 217 aa8.38□□□□□ -1.07
NCSTN-210ENST00000465223 Q5BKY6 102 aa8.38□□□□□ -1.07
NCSTN-210ENST00000465223 SMIM15Q7Z3B0 74 aa8.38□□□□□ -1.07
NCSTN-210ENST00000465223 FCGBPQ9Y6R7 5405 aaPredicted RBP8.37□□□□□ -1.07
NCSTN-210ENST00000465223 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
NCSTN-210ENST00000465223 UPK1BO75841 260 aa8.37□□□□□ -1.07
NCSTN-210ENST00000465223 UBE2AP49459 152 aa8.37□□□□□ -1.07
NCSTN-210ENST00000465223 SFT2D1Q8WV19 159 aa8.37□□□□□ -1.07
NCSTN-210ENST00000465223 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
NCSTN-210ENST00000465223 XP32Q5T750 250 aa8.36□□□□□ -1.07
NCSTN-210ENST00000465223 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
NCSTN-210ENST00000465223 FAM210AQ96ND0 272 aa8.36□□□□□ -1.07
NCSTN-210ENST00000465223 FCER1GP30273 86 aa8.35□□□□□ -1.07
NCSTN-210ENST00000465223 C21orf62-AS1Q17RA5 79 aa8.35□□□□□ -1.07
NCSTN-210ENST00000465223 KCNRGQ8N5I3 272 aa8.35□□□□□ -1.07
NCSTN-210ENST00000465223 NUDT10Q8NFP7 164 aa8.35□□□□□ -1.07
NCSTN-210ENST00000465223 NUDT11Q96G61 164 aa8.35□□□□□ -1.07
NCSTN-210ENST00000465223 LINC00167Q96N53 147 aa8.35□□□□□ -1.07
NCSTN-210ENST00000465223 SMAGPQ0VAQ4 97 aa8.34□□□□□ -1.07
NCSTN-210ENST00000465223 FAM104AQ969W3 186 aa8.34□□□□□ -1.07
NCSTN-210ENST00000465223 C11orf52Q96A22 123 aa8.34□□□□□ -1.07
NCSTN-210ENST00000465223 TP73-AS1Q9UF72 201 aa8.34□□□□□ -1.07
NCSTN-210ENST00000465223 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
NCSTN-210ENST00000465223 MBD3L1Q8WWY6 194 aa8.33□□□□□ -1.08
NCSTN-210ENST00000465223 A0A1B0GVG6 124 aa8.32□□□□□ -1.08
NCSTN-210ENST00000465223 GNG4P50150 75 aa8.32□□□□□ -1.08
NCSTN-210ENST00000465223 IFITM3Q01628 133 aa8.32□□□□□ -1.08
NCSTN-210ENST00000465223 DAND5Q8N907 189 aa8.32□□□□□ -1.08
NCSTN-210ENST00000465223 FLGP20930 4061 aaPredicted RBP8.32□□□□□ -1.08
NCSTN-210ENST00000465223 FAM213BQ8TBF2 198 aa8.31□□□□□ -1.08
NCSTN-210ENST00000465223 TIMM21Q9BVV7 248 aa8.31□□□□□ -1.08
NCSTN-210ENST00000465223 SYNE2Q8WXH0 6885 aaKnown RBP8.3□□□□□ -1.08
NCSTN-210ENST00000465223 TRBV20OR9-2A0A075B6H5 130 aa8.3□□□□□ -1.08
NCSTN-210ENST00000465223 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
NCSTN-210ENST00000465223 VCYO14598 125 aa8.3□□□□□ -1.08
NCSTN-210ENST00000465223 CCL20P78556 96 aa8.3□□□□□ -1.08
NCSTN-210ENST00000465223 TGIF2-C20orf24A0A0A6YYL0 155 aa8.29□□□□□ -1.08
NCSTN-210ENST00000465223 SMKR1H3BMG3 65 aa8.29□□□□□ -1.08
NCSTN-210ENST00000465223 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
NCSTN-210ENST00000465223 RPL39P62891 51 aaKnown RBP8.29□□□□□ -1.08
NCSTN-210ENST00000465223 PRLHP81277 87 aa8.29□□□□□ -1.08
NCSTN-210ENST00000465223 SMIM12Q96EX1 92 aa8.29□□□□□ -1.08
NCSTN-210ENST00000465223 FXYD6-FXYD2A0A087WZ82 144 aa8.28□□□□□ -1.08
NCSTN-210ENST00000465223 IFITM10A6NMD0 228 aa8.28□□□□□ -1.08
NCSTN-210ENST00000465223 RPL32P62910 135 aaKnown RBP8.28□□□□□ -1.08
NCSTN-210ENST00000465223 PNRC1Q12796 327 aaPredicted RBP8.28□□□□□ -1.08
NCSTN-210ENST00000465223 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
NCSTN-210ENST00000465223 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.09
NCSTN-210ENST00000465223 RAB4AP20338 218 aa8.26□□□□□ -1.09
NCSTN-210ENST00000465223 HBBP68871 147 aa8.26□□□□□ -1.09
NCSTN-210ENST00000465223 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
NCSTN-210ENST00000465223 BIN3Q9NQY0 253 aa8.26□□□□□ -1.09
NCSTN-210ENST00000465223 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
NCSTN-210ENST00000465223 Q8NBF4 154 aa8.25□□□□□ -1.09
NCSTN-210ENST00000465223 PLEKHB2Q96CS7 222 aa8.25□□□□□ -1.09
NCSTN-210ENST00000465223 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
NCSTN-210ENST00000465223 SUMO2P61956 95 aaKnown RBP8.24□□□□□ -1.09
NCSTN-210ENST00000465223 AMN1Q8IY45 258 aa8.24□□□□□ -1.09
NCSTN-210ENST00000465223 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
NCSTN-210ENST00000465223 K7EN84 100 aa8.23□□□□□ -1.09
NCSTN-210ENST00000465223 NRACQ8N912 160 aa8.23□□□□□ -1.09
NCSTN-210ENST00000465223 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 SCO1O75880 301 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 CKS1BP61024 79 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
NCSTN-210ENST00000465223 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 TMEM191AQ9H0A3 160 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 MANBALQ9NQG1 85 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 MED9Q9NWA0 146 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
NCSTN-210ENST00000465223 PRSS2P07478 247 aa8.21□□□□□ -1.1
NCSTN-210ENST00000465223 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
NCSTN-210ENST00000465223 MACF1Q9UPN3 7388 aaKnown RBP8.2□□□□□ -1.1
NCSTN-210ENST00000465223 SPINK1P00995 79 aa8.2□□□□□ -1.1
NCSTN-210ENST00000465223 S100ZQ8WXG8 99 aa8.2□□□□□ -1.1
NCSTN-210ENST00000465223 SPANXA1Q9NS26 97 aa8.2□□□□□ -1.1
NCSTN-210ENST00000465223 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
NCSTN-210ENST00000465223 hCG_2014768A0A024R1R8 64 aa8.18□□□□□ -1.1
NCSTN-210ENST00000465223 UMAD1C9J7I0 102 aa8.18□□□□□ -1.1
NCSTN-210ENST00000465223 GIPP09681 153 aaPredicted RBP8.18□□□□□ -1.1
NCSTN-210ENST00000465223 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms