RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 TRBV24-1A0A075B6N3 115 aa6.53□□□□□ -1.36
COL11A1-207ENST00000465209 A0A087WZ39 114 aa6.53□□□□□ -1.36
COL11A1-207ENST00000465209 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
COL11A1-207ENST00000465209 NDUFA1O15239 70 aa6.53□□□□□ -1.36
COL11A1-207ENST00000465209 PPP1R17O96001 155 aa6.53□□□□□ -1.36
COL11A1-207ENST00000465209 FAM104BQ5XKR9 115 aa6.53□□□□□ -1.36
COL11A1-207ENST00000465209 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
COL11A1-207ENST00000465209 IMMP2LQ96T52 175 aa6.53□□□□□ -1.36
COL11A1-207ENST00000465209 CEBPGP53567 150 aa6.52□□□□□ -1.37
COL11A1-207ENST00000465209 MRPS36P82909 103 aaKnown RBP6.52□□□□□ -1.37
COL11A1-207ENST00000465209 RIGQ13278 110 aa6.52□□□□□ -1.37
COL11A1-207ENST00000465209 ALKAL2Q6UX46 152 aa6.52□□□□□ -1.37
COL11A1-207ENST00000465209 C20orf78Q9BR46 151 aa6.52□□□□□ -1.37
COL11A1-207ENST00000465209 M0QXV9 152 aa6.51□□□□□ -1.37
COL11A1-207ENST00000465209 SRP19P09132 144 aaKnown RBP6.51□□□□□ -1.37
COL11A1-207ENST00000465209 BLOC1S1P78537 153 aa6.51□□□□□ -1.37
COL11A1-207ENST00000465209 TMEM241Q24JQ0 296 aa6.51□□□□□ -1.37
COL11A1-207ENST00000465209 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
COL11A1-207ENST00000465209 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
COL11A1-207ENST00000465209 TMEM18Q96B42 140 aa6.51□□□□□ -1.37
COL11A1-207ENST00000465209 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
COL11A1-207ENST00000465209 SPANXA1Q9NS26 97 aa6.51□□□□□ -1.37
COL11A1-207ENST00000465209 LINC00862A6NCI5 91 aa6.5□□□□□ -1.37
COL11A1-207ENST00000465209 ZNF727A8MUV8 499 aa6.5□□□□□ -1.37
COL11A1-207ENST00000465209 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
COL11A1-207ENST00000465209 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
COL11A1-207ENST00000465209 NAT8BQ9UHF3 227 aa6.5□□□□□ -1.37
COL11A1-207ENST00000465209 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
COL11A1-207ENST00000465209 TNFRSF6BO95407 300 aa6.49□□□□□ -1.37
COL11A1-207ENST00000465209 RPL13AP40429 203 aaKnown RBP6.49□□□□□ -1.37
COL11A1-207ENST00000465209 PRR4Q16378 134 aa6.49□□□□□ -1.37
COL11A1-207ENST00000465209 FAM74A3Q4VXF1 159 aa6.49□□□□□ -1.37
COL11A1-207ENST00000465209 CARHSP1Q9Y2V2 147 aaKnown RBP6.49□□□□□ -1.37
COL11A1-207ENST00000465209 TRBV30A0A0K0K1B3 111 aa6.48□□□□□ -1.37
COL11A1-207ENST00000465209 IFITM10A6NMD0 228 aa6.48□□□□□ -1.37
COL11A1-207ENST00000465209 NDUFC2-KCTD14E9PQ53 114 aa6.48□□□□□ -1.37
COL11A1-207ENST00000465209 TCAPO15273 167 aa6.48□□□□□ -1.37
COL11A1-207ENST00000465209 RPL23P62829 140 aaKnown RBP6.48□□□□□ -1.37
COL11A1-207ENST00000465209 HBBP68871 147 aa6.48□□□□□ -1.37
COL11A1-207ENST00000465209 LINC00242Q5T6M2 205 aa6.48□□□□□ -1.37
COL11A1-207ENST00000465209 IGLV4-3A0A075B6K6 122 aa6.47□□□□□ -1.37
COL11A1-207ENST00000465209 A0A1B0GXF2 115 aa6.47□□□□□ -1.37
COL11A1-207ENST00000465209 D6R8Y8 96 aa6.47□□□□□ -1.37
COL11A1-207ENST00000465209 NPYP01303 97 aa6.47□□□□□ -1.37
COL11A1-207ENST00000465209 UBE2D1P51668 147 aa6.47□□□□□ -1.37
COL11A1-207ENST00000465209 UBE2BP63146 152 aa6.47□□□□□ -1.37
COL11A1-207ENST00000465209 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
COL11A1-207ENST00000465209 EIF5A2Q9GZV4 153 aaKnown RBP6.47□□□□□ -1.37
COL11A1-207ENST00000465209 ZNF861PO60384 105 aa6.46□□□□□ -1.38
COL11A1-207ENST00000465209 CKS2P33552 79 aa6.46□□□□□ -1.38
COL11A1-207ENST00000465209 PYGO1Q9Y3Y4 419 aa6.46□□□□□ -1.38
COL11A1-207ENST00000465209 A0A087X002 238 aa6.45□□□□□ -1.38
COL11A1-207ENST00000465209 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
COL11A1-207ENST00000465209 A0A1B0GW15 77 aa6.45□□□□□ -1.38
COL11A1-207ENST00000465209 C9JQL5 133 aa6.45□□□□□ -1.38
COL11A1-207ENST00000465209 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
COL11A1-207ENST00000465209 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
COL11A1-207ENST00000465209 LINC01561Q8N1V8 128 aa6.44□□□□□ -1.38
COL11A1-207ENST00000465209 NUPR1O60356 82 aa6.43□□□□□ -1.38
COL11A1-207ENST00000465209 IFI27P40305 119 aaPredicted RBP6.43□□□□□ -1.38
COL11A1-207ENST00000465209 ADIRFQ15847 76 aa6.43□□□□□ -1.38
COL11A1-207ENST00000465209 MRPL54Q6P161 138 aaKnown RBP6.43□□□□□ -1.38
COL11A1-207ENST00000465209 PPBPP02775 128 aa6.42□□□□□ -1.38
COL11A1-207ENST00000465209 TMEM141Q96I45 108 aa6.42□□□□□ -1.38
COL11A1-207ENST00000465209 PACRGQ96M98 296 aaPredicted RBP6.42□□□□□ -1.38
COL11A1-207ENST00000465209 NAT8Q9UHE5 227 aa6.42□□□□□ -1.38
COL11A1-207ENST00000465209 C22orf24Q9Y442 160 aa6.42□□□□□ -1.38
COL11A1-207ENST00000465209 PRSS47A8MTI9 375 aa6.41□□□□□ -1.38
COL11A1-207ENST00000465209 TSPAN13O95857 204 aa6.41□□□□□ -1.38
COL11A1-207ENST00000465209 SRSF3P84103 164 aaKnown RBP6.41□□□□□ -1.38
COL11A1-207ENST00000465209 ZC2HC1BQ5TFG8 222 aa6.41□□□□□ -1.38
COL11A1-207ENST00000465209 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
COL11A1-207ENST00000465209 AKAP14Q86UN6 197 aa6.41□□□□□ -1.38
COL11A1-207ENST00000465209 LINC00469Q8N7U9 141 aa6.41□□□□□ -1.38
COL11A1-207ENST00000465209 AMELXQ99217 191 aa6.41□□□□□ -1.38
COL11A1-207ENST00000465209 F8W036 122 aa6.4□□□□□ -1.38
COL11A1-207ENST00000465209 TEX43Q6ZNM6 134 aa6.4□□□□□ -1.38
COL11A1-207ENST00000465209 Q8IZM0 81 aa6.4□□□□□ -1.38
COL11A1-207ENST00000465209 ORMDL3Q8N138 153 aa6.4□□□□□ -1.38
COL11A1-207ENST00000465209 CTDSP1Q9GZU7 261 aa6.4□□□□□ -1.38
COL11A1-207ENST00000465209 TP73-AS1Q9UF72 201 aa6.4□□□□□ -1.38
COL11A1-207ENST00000465209 S100A8P05109 93 aa6.39□□□□□ -1.39
COL11A1-207ENST00000465209 KRTAP13-2Q52LG2 175 aa6.39□□□□□ -1.39
COL11A1-207ENST00000465209 KRTAP13-1Q8IUC0 172 aa6.39□□□□□ -1.39
COL11A1-207ENST00000465209 PRELID3AQ96N28 172 aa6.39□□□□□ -1.39
COL11A1-207ENST00000465209 XAGE1AQ9HD64 81 aa6.39□□□□□ -1.39
COL11A1-207ENST00000465209 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
COL11A1-207ENST00000465209 BCE1O60756 84 aa6.38□□□□□ -1.39
COL11A1-207ENST00000465209 RAB5AP20339 215 aa6.38□□□□□ -1.39
COL11A1-207ENST00000465209 Q6ZN92 141 aa6.38□□□□□ -1.39
COL11A1-207ENST00000465209 TMEM136Q6ZRR5 245 aa6.38□□□□□ -1.39
COL11A1-207ENST00000465209 MRPL55Q7Z7F7 128 aaKnown RBP6.38□□□□□ -1.39
COL11A1-207ENST00000465209 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
COL11A1-207ENST00000465209 C2orf66Q6UXQ4 117 aa6.37□□□□□ -1.39
COL11A1-207ENST00000465209 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
COL11A1-207ENST00000465209 C2orf88Q9BSF0 95 aa6.37□□□□□ -1.39
COL11A1-207ENST00000465209 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
COL11A1-207ENST00000465209 NPSP0C0P6 89 aa6.36□□□□□ -1.39
COL11A1-207ENST00000465209 CRYGAP11844 174 aa6.36□□□□□ -1.39
COL11A1-207ENST00000465209 LBHQ53QV2 105 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms