RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 ERC2-IT1O76042 136 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 LINC01547P58512 204 aaPredicted RBP2.75□□□□□ -1.97
CCNL1-204ENST00000464316 COX17Q14061 63 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 MUC7Q8TAX7 377 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 SPTAN1Q13813 2472 aaKnown RBP2.75□□□□□ -1.97
CCNL1-204ENST00000464316 LOC110117498A0A087WWA1 95 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 A0A0U1RQV1 116 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 LY6G6DO95868 133 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 FUSP35637 526 aaKnown RBP eCLIP2.75□□□□□ -1.97
CCNL1-204ENST00000464316 LINC00482Q8N8I6 264 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 LINC00167Q96N53 147 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 RANBP2P49792 3224 aaKnown RBP2.75□□□□□ -1.97
CCNL1-204ENST00000464316 SPTBN2O15020 2390 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 EP300Q09472 2414 aaPredicted RBP2.75□□□□□ -1.97
CCNL1-204ENST00000464316 Q8N3U1 123 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 RMI2Q96E14 147 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 UNC80Q8N2C7 3258 aa2.75□□□□□ -1.97
CCNL1-204ENST00000464316 PRRC2CQ9Y520 2896 aaKnown RBP2.75□□□□□ -1.97
CCNL1-204ENST00000464316 PTPRZ1P23471 2315 aaPredicted RBP2.74□□□□□ -1.97
CCNL1-204ENST00000464316 DYNC2H1Q8NCM8 4307 aaKnown RBP2.74□□□□□ -1.97
CCNL1-204ENST00000464316 TECTAO75443 2155 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 A8MTW9 85 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 EPM2AB3EWF7 344 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 B4DSR2 109 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 MSMBP08118 114 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 Q6ZVQ6 151 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 Q8IZM0 81 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 CFHR3Q02985 330 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 NREPQ16612 68 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 C6orf99Q4VX62 202 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 C9orf129Q5T035 196 aaKnown RBP2.74□□□□□ -1.97
CCNL1-204ENST00000464316 C11orf72Q8NBR9 251 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 TMEM254Q8TBM7 123 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 DMDP11532 3685 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 IGHV3OR16-9A0A0B4J2B5 98 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 IGHV4-38-2P0DP08 117 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 GNLYP22749 145 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 MPLKIPQ8TAP9 179 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 Q96MF0 132 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 Q9UF83 564 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 NBPF19A0A087WUL8 3843 aa2.74□□□□□ -1.97
CCNL1-204ENST00000464316 TRBV6-8A0A0A6YYG3 113 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 ESRGQ1W209 222 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 Q6ZQT0 140 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 MAP6D1Q9H9H5 199 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 NBEAQ8NFP9 2946 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 BPY2O14599 106 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 EDN2P20800 178 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 LINC00575Q6W349 94 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 C6orf223Q8N319 242 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 C16orf74Q96GX8 76 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 CUL9Q8IWT3 2517 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 DSCR9P59020 149 aa2.73□□□□□ -1.97
CCNL1-204ENST00000464316 NOP10Q9NPE3 64 aaKnown RBP2.73□□□□□ -1.97
CCNL1-204ENST00000464316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.72□□□□□ -1.979e-8■■■■□ 24
CCNL1-204ENST00000464316 LINC00959A0A1B0GUT2 108 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 PRYO14603 147 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 ADORA2A-AS1P86434 159 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.72□□□□□ -1.97
CCNL1-204ENST00000464316 Q6ZTI0 123 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 KRTAP17-1Q9BYP8 105 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 SORL1Q92673 2214 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 DIRC1Q969H9 104 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 CCL19Q99731 98 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 TRAV10A0A0B4J240 114 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 IGHV4-61A0A0C4DH41 118 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 PLAC8L1A1L4L8 177 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 LYRM9A8MSI8 78 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 CCL24O00175 119 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 PRM2P04554 102 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 KRTAP21-3Q3LHN1 58 aa2.72□□□□□ -1.97
CCNL1-204ENST00000464316 CFAP54Q96N23 3096 aa2.71□□□□□ -1.97
CCNL1-204ENST00000464316 IGHV4-59P01825 116 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 HIGD2BQ4VC39 106 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 C9orf66Q5T8R8 295 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 Q6ZQY7 126 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 FP248Q71RG6 208 aaPredicted RBP2.71□□□□□ -1.98
CCNL1-204ENST00000464316 SLURP1P55000 103 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 DAD1P61803 113 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 DEFB114Q30KQ6 69 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 DEFB112Q30KQ8 113 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 LAMA1P25391 3075 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 WDFY3Q8IZQ1 3526 aa2.71□□□□□ -1.98
CCNL1-204ENST00000464316 C2CD3Q4AC94 2353 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 A0A1B0GUV1 79 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 COX7BP24311 80 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 CD164L2Q6UWJ8 174 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 LINC00474Q9P2X8 69 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 IGLV4-60A0A075B6I1 120 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 LINC01356Q8N9X3 169 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 TM2D3Q9BRN9 247 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 TRBV7-4A0A0J9YYF1 115 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 C1orf158Q8N1D5 194 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 SPATA3Q8NHX4 192 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 C4orf3Q8WVX3 66 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 PTPRQQ9UMZ3 2332 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 ZFHX4Q86UP3 3567 aa2.7□□□□□ -1.98
CCNL1-204ENST00000464316 VCANP13611 3396 aa2.69□□□□□ -1.98
CCNL1-204ENST00000464316 CDH23Q9H251 3354 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms