RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 LINC00310P59036 64 aa16.44■□□□□ 0.22
PAXBP1-206ENST00000464256 Q6ZN92 141 aa16.44■□□□□ 0.22
PAXBP1-206ENST00000464256 IGHV3OR16-9A0A0B4J2B5 98 aa16.43■□□□□ 0.22
PAXBP1-206ENST00000464256 HAMPP81172 84 aa16.43■□□□□ 0.22
PAXBP1-206ENST00000464256 COX7A2LO14548 114 aa16.43■□□□□ 0.22
PAXBP1-206ENST00000464256 FAM30AQ9NZY2 134 aa16.43■□□□□ 0.22
PAXBP1-206ENST00000464256 HBDP02042 147 aa16.42■□□□□ 0.22
PAXBP1-206ENST00000464256 NPSP0C0P6 89 aa16.42■□□□□ 0.22
PAXBP1-206ENST00000464256 RAB5BP61020 215 aa16.42■□□□□ 0.22
PAXBP1-206ENST00000464256 GVQW2A0A096LPI5 108 aaPredicted RBP16.41■□□□□ 0.22
PAXBP1-206ENST00000464256 BAGE3Q86Y29 109 aa16.41■□□□□ 0.22
PAXBP1-206ENST00000464256 C2orf88Q9BSF0 95 aa16.41■□□□□ 0.22
PAXBP1-206ENST00000464256 KRTAP17-1Q9BYP8 105 aa16.4■□□□□ 0.22
PAXBP1-206ENST00000464256 IGHV1-58A0A0C4DH39 117 aa16.4■□□□□ 0.22
PAXBP1-206ENST00000464256 PDZD11Q5EBL8 140 aa16.4■□□□□ 0.22
PAXBP1-206ENST00000464256 CFAP161Q6P656 301 aa16.4■□□□□ 0.22
PAXBP1-206ENST00000464256 NUPR1O60356 82 aa16.39■□□□□ 0.21
PAXBP1-206ENST00000464256 MALP21145 153 aa16.39■□□□□ 0.21
PAXBP1-206ENST00000464256 FAM19A2Q8N3H0 131 aa16.39■□□□□ 0.21
PAXBP1-206ENST00000464256 CHCHD1Q96BP2 118 aaKnown RBP16.38■□□□□ 0.21
PAXBP1-206ENST00000464256 FAT1Q14517 4588 aa16.38■□□□□ 0.21
PAXBP1-206ENST00000464256 A0A0J9YXV3 536 aa16.37■□□□□ 0.21
PAXBP1-206ENST00000464256 SERF1AO75920 110 aa16.37■□□□□ 0.21
PAXBP1-206ENST00000464256 CNBPP62633 177 aaKnown RBP16.37■□□□□ 0.21
PAXBP1-206ENST00000464256 XGP55808 180 aa16.37■□□□□ 0.21
PAXBP1-206ENST00000464256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.36■□□□□ 0.21
PAXBP1-206ENST00000464256 C9orf163Q8N9P6 203 aa16.36■□□□□ 0.21
PAXBP1-206ENST00000464256 CST9LQ9H4G1 147 aa16.36■□□□□ 0.21
PAXBP1-206ENST00000464256 PAPPA-AS1Q5QFB9 102 aa16.35■□□□□ 0.21
PAXBP1-206ENST00000464256 LINC01549A6NIU2 74 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 FAM19A3Q7Z5A8 133 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 IGLV4-69A0A075B6H9 119 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BKO60814 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 CDK2AP2O75956 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BJP06899 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BOP23527 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BBP33778 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BDP58876 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BCP62807 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST2H2BEQ16778 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BHQ93079 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BNQ99877 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 HIST1H2BMQ99879 126 aa16.34■□□□□ 0.21
PAXBP1-206ENST00000464256 A0A087WZ39 114 aa16.33■□□□□ 0.2
PAXBP1-206ENST00000464256 HSBP1O75506 76 aa16.33■□□□□ 0.2
PAXBP1-206ENST00000464256 PMVKQ15126 192 aa16.33■□□□□ 0.2
PAXBP1-206ENST00000464256 ORAOV1Q8WV07 137 aa16.32■□□□□ 0.2
PAXBP1-206ENST00000464256 CDKN2A-AS1Q9UH64 79 aa16.32■□□□□ 0.2
PAXBP1-206ENST00000464256 IGHV3-64A0A075B6Q5 118 aa16.31■□□□□ 0.2
PAXBP1-206ENST00000464256 NDUFA6P56556 154 aa16.31■□□□□ 0.2
PAXBP1-206ENST00000464256 PANO1I0J062 215 aa16.3■□□□□ 0.2
PAXBP1-206ENST00000464256 ZNF561-AS1K7EIQ3 104 aa16.3■□□□□ 0.2
PAXBP1-206ENST00000464256 Q6ZSA8 131 aa16.3■□□□□ 0.2
PAXBP1-206ENST00000464256 SPAG11BQ08648 103 aa16.3■□□□□ 0.2
PAXBP1-206ENST00000464256 SDIM1Q6ZPB5 146 aa16.29■□□□□ 0.2
PAXBP1-206ENST00000464256 APOMO95445 188 aa16.27■□□□□ 0.2
PAXBP1-206ENST00000464256 Q6ZRU5 148 aa16.27■□□□□ 0.2
PAXBP1-206ENST00000464256 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.27■□□□□ 0.19
PAXBP1-206ENST00000464256 ATP5LO75964 103 aa16.27■□□□□ 0.19
PAXBP1-206ENST00000464256 HERVK_113P63121 156 aa16.27■□□□□ 0.19
PAXBP1-206ENST00000464256 GEMIN7Q9H840 131 aaKnown RBP16.27■□□□□ 0.19
PAXBP1-206ENST00000464256 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.27■□□□□ 0.19
PAXBP1-206ENST00000464256 TINCRA0A1B0GVN0 87 aa16.25■□□□□ 0.19
PAXBP1-206ENST00000464256 CHTF8P0CG12 524 aa16.25■□□□□ 0.19
PAXBP1-206ENST00000464256 SYCNQ0VAF6 134 aa16.25■□□□□ 0.19
PAXBP1-206ENST00000464256 KIAA0087Q14695 138 aa16.25■□□□□ 0.19
PAXBP1-206ENST00000464256 LINC00469Q8N7U9 141 aa16.25■□□□□ 0.19
PAXBP1-206ENST00000464256 OR10D4PQ8NGN7 298 aa16.25■□□□□ 0.19
PAXBP1-206ENST00000464256 CARD19Q96LW7 228 aa16.25■□□□□ 0.19
PAXBP1-206ENST00000464256 IFI27L1Q96BM0 104 aa16.24■□□□□ 0.19
PAXBP1-206ENST00000464256 C10orf25Q5T742 122 aa16.24■□□□□ 0.19
PAXBP1-206ENST00000464256 CAMK2N2Q96S95 79 aa16.24■□□□□ 0.19
PAXBP1-206ENST00000464256 IGLV5-45A0A087WSX0 123 aa16.22■□□□□ 0.19
PAXBP1-206ENST00000464256 SEC11AP67812 179 aa16.22■□□□□ 0.19
PAXBP1-206ENST00000464256 SCXQ7RTU7 201 aa16.22■□□□□ 0.19
PAXBP1-206ENST00000464256 IGLC3P0DOY3 106 aa16.21■□□□□ 0.19
PAXBP1-206ENST00000464256 C2orf82Q6UX34 121 aa16.21■□□□□ 0.19
PAXBP1-206ENST00000464256 C2orf48Q96LS8 159 aa16.21■□□□□ 0.19
PAXBP1-206ENST00000464256 CHAC1Q9BUX1 264 aa16.21■□□□□ 0.19
PAXBP1-206ENST00000464256 SMR3BP02814 79 aaPredicted RBP16.21■□□□□ 0.18
PAXBP1-206ENST00000464256 FABP4P15090 132 aa16.21■□□□□ 0.18
PAXBP1-206ENST00000464256 SPINK8P0C7L1 97 aa16.2■□□□□ 0.18
PAXBP1-206ENST00000464256 UNQ6190/PRO20217Q6UXQ8 127 aa16.2■□□□□ 0.18
PAXBP1-206ENST00000464256 LINC01561Q8N1V8 128 aa16.2■□□□□ 0.18
PAXBP1-206ENST00000464256 TOMM7Q9P0U1 55 aa16.2■□□□□ 0.18
PAXBP1-206ENST00000464256 SMIM1B2RUZ4 78 aa16.19■□□□□ 0.18
PAXBP1-206ENST00000464256 LEPROTL1O95214 131 aa16.19■□□□□ 0.18
PAXBP1-206ENST00000464256 ABCA13Q86UQ4 5058 aa16.19■□□□□ 0.18
PAXBP1-206ENST00000464256 C11orf86A6NJI1 115 aa16.18■□□□□ 0.18
PAXBP1-206ENST00000464256 KRTAP4-5Q9BYR2 181 aa16.18■□□□□ 0.18
PAXBP1-206ENST00000464256 H0Y8G0 127 aa16.18■□□□□ 0.18
PAXBP1-206ENST00000464256 ZNF22P17026 224 aaPredicted RBP16.18■□□□□ 0.18
PAXBP1-206ENST00000464256 CIRBP-AS1Q8TBR5 109 aa16.18■□□□□ 0.18
PAXBP1-206ENST00000464256 PACRGQ96M98 296 aaPredicted RBP16.18■□□□□ 0.18
PAXBP1-206ENST00000464256 TMA7Q9Y2S6 64 aaKnown RBP16.18■□□□□ 0.18
PAXBP1-206ENST00000464256 VPS13BQ7Z7G8 4022 aa16.17■□□□□ 0.18
PAXBP1-206ENST00000464256 A0A096LNI7 61 aa16.17■□□□□ 0.18
PAXBP1-206ENST00000464256 CHTOPQ9Y3Y2 248 aaKnown RBP16.17■□□□□ 0.18
PAXBP1-206ENST00000464256 IGKV2-24A0A0C4DH68 120 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms