RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 SRCAPQ6ZRS2 3230 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 DMXL2Q8TDJ6 3036 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 I3L2K1 104 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 SELENOWP63302 87 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 ARL11Q969Q4 196 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 DNAH3Q8TD57 4116 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 ALMS1Q8TCU4 4167 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 PKHD1L1Q86WI1 4243 aa-0.46□□□□□ -2.48
USP9X-204ENST00000463829 BCL9LQ86UU0 1499 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 ANK3Q12955 4377 aaKnown RBP-0.47□□□□□ -2.48
USP9X-204ENST00000463829 MXRA5Q9NR99 2828 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 FXYD6-FXYD2A0A087WZ82 144 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 FAM25AB3EWG3 89 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 FAM25CB3EWG5 89 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 FAM25GB3EWG6 89 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 BAGE2Q86Y30 109 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 LINC00470Q9BZP3 86 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 NAA60Q9H7X0 242 aa-0.47□□□□□ -2.48
USP9X-204ENST00000463829 ZFHX4Q86UP3 3567 aa-0.47□□□□□ -2.49
USP9X-204ENST00000463829 PATJQ8NI35 1801 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 A0A0C4DFX4 3053 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 BICRAQ9NZM4 1560 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 FAM186AA6NE01 2351 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 ZFHX3Q15911 3703 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 DNAH5Q8TE73 4624 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 TLN1Q9Y490 2541 aaKnown RBP-0.48□□□□□ -2.49
USP9X-204ENST00000463829 TRBV6-1A0A0K0K1D8 114 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 F8VRH5 84 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 UQCR11O14957 56 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 PI4KAP42356 2102 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 TPPP2P59282 170 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 PIGYQ3MUY2 71 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 MEIG1Q5JSS6 88 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 Q6JHZ5 121 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 LINC00472Q9H8W2 130 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 NDUFA4L2Q9NRX3 87 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 ZNF236Q9UL36 1845 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 DOCK1Q14185 1865 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 SPTBN1Q01082 2364 aaKnown RBP-0.48□□□□□ -2.49
USP9X-204ENST00000463829 TLN2Q9Y4G6 2542 aa-0.48□□□□□ -2.49
USP9X-204ENST00000463829 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.49□□□□□ -2.49
USP9X-204ENST00000463829 LRRK2Q5S007 2527 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 APOC3P02656 99 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 SPRR2EP22531 72 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 SPRR2BP35325 72 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 SPRR2AP35326 72 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 CCDC58Q4VC31 144 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 MGST2Q99735 147 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 DNAH6Q9C0G6 4158 aa-0.49□□□□□ -2.49
USP9X-204ENST00000463829 DCHS2Q6V1P9 2916 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 CHD7Q9P2D1 2997 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 APOBP04114 4563 aaKnown RBP-0.5□□□□□ -2.49
USP9X-204ENST00000463829 WNK1Q9H4A3 2382 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 SPENQ96T58 3664 aaKnown RBP-0.5□□□□□ -2.49
USP9X-204ENST00000463829 TRBV7-3A0A075B6L6 115 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 GNG7O60262 68 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 PPP3R2Q96LZ3 170 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 DYNLRB1Q9NP97 96 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 CSMD2Q7Z408 3487 aa-0.5□□□□□ -2.49
USP9X-204ENST00000463829 SMG1Q96Q15 3661 aaKnown RBP-0.5□□□□□ -2.49
USP9X-204ENST00000463829 TRRAPQ9Y4A5 3859 aa-0.51□□□□□ -2.49
USP9X-204ENST00000463829 CMYA5Q8N3K9 4069 aa-0.51□□□□□ -2.49
USP9X-204ENST00000463829 URB1O60287 2271 aaKnown RBP-0.51□□□□□ -2.49
USP9X-204ENST00000463829 BTG2P78543 158 aa-0.51□□□□□ -2.49
USP9X-204ENST00000463829 Q56UQ5 140 aa-0.51□□□□□ -2.49
USP9X-204ENST00000463829 KIF21AQ7Z4S6 1674 aa-0.51□□□□□ -2.49
USP9X-204ENST00000463829 DOCK2Q92608 1830 aa-0.51□□□□□ -2.49
USP9X-204ENST00000463829 SVEP1Q4LDE5 3571 aa-0.51□□□□□ -2.49
USP9X-204ENST00000463829 VPS13DQ5THJ4 4388 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 PAPPAQ13219 1627 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 EYSQ5T1H1 3165 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 IGLC7A0M8Q6 106 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 K7EQZ3 153 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 TNFP01375 233 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 TSLPQ969D9 159 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 SPANXDQ9BXN6 97 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 LINC01558Q9Y6Z2 57 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 CSMD1Q96PZ7 3565 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 USF3Q68DE3 2245 aa-0.52□□□□□ -2.49
USP9X-204ENST00000463829 GVINP1Q7Z2Y8 2422 aa-0.53□□□□□ -2.49
USP9X-204ENST00000463829 CPSF1Q10570 1443 aaKnown RBP-0.53□□□□□ -2.49
USP9X-204ENST00000463829 NAIPQ13075 1403 aa-0.53□□□□□ -2.49
USP9X-204ENST00000463829 MIF4GDA9UHW6 222 aaKnown RBP-0.53□□□□□ -2.49
USP9X-204ENST00000463829 NDUFA2O43678 99 aa-0.53□□□□□ -2.49
USP9X-204ENST00000463829 SBF2Q86WG5 1849 aa-0.53□□□□□ -2.49
USP9X-204ENST00000463829 RIMS1Q86UR5 1692 aaKnown RBP-0.53□□□□□ -2.49
USP9X-204ENST00000463829 RELNP78509 3460 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 SHANK2Q9UPX8 1470 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 LOC285095A0A1B0GVY8 99 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 HMGN4O00479 90 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 ZZEF1O43149 2961 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 APOC2P02655 101 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 COX6B1P14854 86 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 C8orf59Q8N0T1 100 aaPredicted RBP-0.54□□□□□ -2.5
USP9X-204ENST00000463829 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.54□□□□□ -2.5
USP9X-204ENST00000463829 CNOT1A5YKK6 2376 aaKnown RBP-0.54□□□□□ -2.5
USP9X-204ENST00000463829 TRIOO75962 3097 aa-0.54□□□□□ -2.5
USP9X-204ENST00000463829 BOD1L1Q8NFC6 3051 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 SSSCA1O60232 199 aa-0.55□□□□□ -2.5
USP9X-204ENST00000463829 FGF7P21781 194 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms