RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TM2D3Q9BRN9 247 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 UBL5Q9BZL1 73 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 SMAD5-AS1Q9Y6J3 95 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 RYR3Q15413 4870 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 CFAP46Q8IYW2 2715 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 PRRC2CQ9Y520 2896 aaKnown RBP2.59□□□□□ -1.99
COL8A1-205ENST00000463753 TEX15Q9BXT5 2789 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 OTOGQ6ZRI0 2925 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 PINLYPA6NC86 204 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 SRRM5B3KS81 715 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 GNRH2O43555 120 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 CGB3P0DN86 165 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 CGB7P0DN87 165 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 PRR9Q5T870 116 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 SUMO4Q6EEV6 95 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 KTN1-AS1Q86SY8 53 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 LAMTOR3Q9UHA4 124 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 FBN1P35555 2871 aaKnown RBP2.59□□□□□ -1.99
COL8A1-205ENST00000463753 DNAJC13O75165 2243 aa2.59□□□□□ -1.99
COL8A1-205ENST00000463753 IGLV3-12A0A075B6K2 115 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 TEX22C9J3V5 150 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 K7EIM0 57 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 K7EMT4 169 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 TMEM256-PLSCR3K7ERE1 68 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 PPP1R17O96001 155 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 FUSP35637 526 aaKnown RBP eCLIP2.59□□□□□ -2
COL8A1-205ENST00000463753 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -2
COL8A1-205ENST00000463753 Q6ZSN1 163 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 KLK9Q9UKQ9 250 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 CNOT1A5YKK6 2376 aaKnown RBP2.59□□□□□ -2
COL8A1-205ENST00000463753 AKAP9Q99996 3911 aa2.59□□□□□ -2
COL8A1-205ENST00000463753 EP300Q09472 2414 aaPredicted RBP2.58□□□□□ -2
COL8A1-205ENST00000463753 IGLV4-3A0A075B6K6 122 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 F6UB75 175 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 ZZEF1O43149 2961 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 NDUFC1O43677 76 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 FOLR3P41439 243 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 DEFB1P60022 68 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 MRGPRG-AS1Q2M3A8 158 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 KRTAP24-1Q3LI83 254 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 SPINK14Q6IE38 97 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 SCXQ7RTU7 201 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 VMO1Q7Z5L0 202 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 Q9H8V8 135 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 FAM30AQ9NZY2 134 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 RELNP78509 3460 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 IGHV4-4A0A075B6R2 117 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 IGKV3D-15A0A087WSY6 115 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 CLPSL1A2RUU4 121 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 NDUFB3O43676 98 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 IGHV1-69P01742 117 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 CRPP02741 224 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 RPL36AP83881 106 aaKnown RBP2.58□□□□□ -2
COL8A1-205ENST00000463753 ATP5EP2Q5VTU8 51 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 Q6ZTI0 123 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 C11orf72Q8NBR9 251 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 RPL36ALQ969Q0 106 aaKnown RBP2.58□□□□□ -2
COL8A1-205ENST00000463753 DSPP15924 2871 aaKnown RBP2.58□□□□□ -2
COL8A1-205ENST00000463753 DOPEY2Q9Y3R5 2298 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 C8orf87E5RJ46 101 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 M0R378 163 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 POLR2KP53803 58 aaKnown RBP2.58□□□□□ -2
COL8A1-205ENST00000463753 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 TMEM254Q8TBM7 123 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 WWC2-AS2Q96NR7 200 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 ORMDL1Q9P0S3 153 aa2.58□□□□□ -2
COL8A1-205ENST00000463753 IBA57-AS1B1ANH7 110 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 NANOS2P60321 138 aaKnown RBP2.57□□□□□ -2
COL8A1-205ENST00000463753 KHDC1LQ5JSQ8 128 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 Q6ZRP5 223 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 GAFA1Q96PS6 74 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 KRTAP9-3Q9BYQ3 159 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 IGKV3-7A0A075B6H7 116 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 IGHV1-18A0A0C4DH31 117 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
COL8A1-205ENST00000463753 M0R1B8 84 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 KRTAP10-2P60368 255 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 Q8N6K4 173 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 CNEP1R1Q8N9A8 125 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 DYNLRB2Q8TF09 96 aa2.57□□□□□ -2
COL8A1-205ENST00000463753 LCE6AA0A183 80 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 A8MUN3 132 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 PRYO14603 147 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 ZNF73O43830 326 aaPredicted RBP2.56□□□□□ -2
COL8A1-205ENST00000463753 IGKV3-15P01624 115 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 NREPQ16612 68 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 C20orf203Q8NBC4 194 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 SMIM11BQ8TCY0 68 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 CDKN2A-AS1Q9UH64 79 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 HERC2O95714 4834 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 SORL1Q92673 2214 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 ICE1Q9Y2F5 2266 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 IGHV3-73A0A0B4J1V6 119 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 IGHV1-2P23083 117 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 PRR4Q16378 134 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 ECSCRQ19T08 205 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 OVOL2Q9BRP0 275 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 HIVEP3Q5T1R4 2406 aa2.56□□□□□ -2
COL8A1-205ENST00000463753 USP9YO00507 2555 aaPredicted RBP2.56□□□□□ -2
COL8A1-205ENST00000463753 DMXL2Q8TDJ6 3036 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms