RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 SMDT1Q9H4I9 107 aa10.37□□□□□ -0.75
HMGN1-209ENST00000463631 RPL32P62910 135 aaKnown RBP10.36□□□□□ -0.75
HMGN1-209ENST00000463631 RIGQ13278 110 aa10.36□□□□□ -0.75
HMGN1-209ENST00000463631 KRTAP7-1Q8IUC3 87 aa10.36□□□□□ -0.75
HMGN1-209ENST00000463631 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
HMGN1-209ENST00000463631 C6orf48Q9UBA6 75 aa10.36□□□□□ -0.75
HMGN1-209ENST00000463631 TCAPO15273 167 aa10.35□□□□□ -0.75
HMGN1-209ENST00000463631 UBE2D1P51668 147 aa10.35□□□□□ -0.75
HMGN1-209ENST00000463631 PRR4Q16378 134 aa10.35□□□□□ -0.75
HMGN1-209ENST00000463631 C20orf78Q9BR46 151 aa10.35□□□□□ -0.75
HMGN1-209ENST00000463631 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
HMGN1-209ENST00000463631 TRBV24-1A0A075B6N3 115 aa10.34□□□□□ -0.75
HMGN1-209ENST00000463631 M0QXV9 152 aa10.34□□□□□ -0.75
HMGN1-209ENST00000463631 CEBPGP53567 150 aa10.34□□□□□ -0.75
HMGN1-209ENST00000463631 BLOC1S1P78537 153 aa10.34□□□□□ -0.75
HMGN1-209ENST00000463631 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
HMGN1-209ENST00000463631 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
HMGN1-209ENST00000463631 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
HMGN1-209ENST00000463631 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
HMGN1-209ENST00000463631 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
HMGN1-209ENST00000463631 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
HMGN1-209ENST00000463631 CARHSP1Q9Y2V2 147 aaKnown RBP10.33□□□□□ -0.76
HMGN1-209ENST00000463631 V9GYV3 84 aa10.33□□□□□ -0.76
HMGN1-209ENST00000463631 LINC00862A6NCI5 91 aa10.32□□□□□ -0.76
HMGN1-209ENST00000463631 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
HMGN1-209ENST00000463631 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
HMGN1-209ENST00000463631 IFITM10A6NMD0 228 aa10.31□□□□□ -0.76
HMGN1-209ENST00000463631 UBE2BP63146 152 aa10.31□□□□□ -0.76
HMGN1-209ENST00000463631 TRBV30A0A0K0K1B3 111 aa10.3□□□□□ -0.76
HMGN1-209ENST00000463631 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
HMGN1-209ENST00000463631 HBBP68871 147 aa10.3□□□□□ -0.76
HMGN1-209ENST00000463631 KIAA0087Q14695 138 aa10.3□□□□□ -0.76
HMGN1-209ENST00000463631 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
HMGN1-209ENST00000463631 NAT8BQ9UHF3 227 aa10.3□□□□□ -0.76
HMGN1-209ENST00000463631 TGIF2-C20orf24A0A0A6YYL0 155 aa10.29□□□□□ -0.76
HMGN1-209ENST00000463631 NDUFC2-KCTD14E9PQ53 114 aa10.29□□□□□ -0.76
HMGN1-209ENST00000463631 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
HMGN1-209ENST00000463631 A0A1B0GW15 77 aa10.27□□□□□ -0.77
HMGN1-209ENST00000463631 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
HMGN1-209ENST00000463631 CKS2P33552 79 aa10.27□□□□□ -0.77
HMGN1-209ENST00000463631 C9orf129Q5T035 196 aaKnown RBP10.27□□□□□ -0.77
HMGN1-209ENST00000463631 EIF5A2Q9GZV4 153 aaKnown RBP10.27□□□□□ -0.77
HMGN1-209ENST00000463631 ZNF861PO60384 105 aa10.26□□□□□ -0.77
HMGN1-209ENST00000463631 FAM74A3Q4VXF1 159 aa10.26□□□□□ -0.77
HMGN1-209ENST00000463631 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-209ENST00000463631 SRP19P09132 144 aaKnown RBP10.25□□□□□ -0.77
HMGN1-209ENST00000463631 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
HMGN1-209ENST00000463631 SMIM27A0A1W2PRY6 76 aa10.24□□□□□ -0.77
HMGN1-209ENST00000463631 C2orf82Q6UX34 121 aa10.24□□□□□ -0.77
HMGN1-209ENST00000463631 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
HMGN1-209ENST00000463631 NUPR1O60356 82 aa10.23□□□□□ -0.77
HMGN1-209ENST00000463631 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-209ENST00000463631 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
HMGN1-209ENST00000463631 PACRGQ96M98 296 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-209ENST00000463631 FAT4Q6V0I7 4981 aa10.23□□□□□ -0.77
HMGN1-209ENST00000463631 D6R8Y8 96 aa10.22□□□□□ -0.77
HMGN1-209ENST00000463631 NPYP01303 97 aa10.22□□□□□ -0.77
HMGN1-209ENST00000463631 PPBPP02775 128 aa10.21□□□□□ -0.77
HMGN1-209ENST00000463631 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.77
HMGN1-209ENST00000463631 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
HMGN1-209ENST00000463631 S100A8P05109 93 aa10.2□□□□□ -0.78
HMGN1-209ENST00000463631 A0A087X002 238 aa10.19□□□□□ -0.78
HMGN1-209ENST00000463631 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
HMGN1-209ENST00000463631 F8W036 122 aa10.19□□□□□ -0.78
HMGN1-209ENST00000463631 TMEM141Q96I45 108 aa10.19□□□□□ -0.78
HMGN1-209ENST00000463631 TSPAN13O95857 204 aa10.18□□□□□ -0.78
HMGN1-209ENST00000463631 ADIRFQ15847 76 aa10.18□□□□□ -0.78
HMGN1-209ENST00000463631 RAB5AP20339 215 aa10.17□□□□□ -0.78
HMGN1-209ENST00000463631 LBHQ53QV2 105 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-209ENST00000463631 TP73-AS1Q9UF72 201 aa10.17□□□□□ -0.78
HMGN1-209ENST00000463631 NAT8Q9UHE5 227 aa10.17□□□□□ -0.78
HMGN1-209ENST00000463631 C22orf24Q9Y442 160 aa10.17□□□□□ -0.78
HMGN1-209ENST00000463631 MRPL54Q6P161 138 aaKnown RBP10.16□□□□□ -0.78
HMGN1-209ENST00000463631 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
HMGN1-209ENST00000463631 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
HMGN1-209ENST00000463631 CTDSP1Q9GZU7 261 aa10.16□□□□□ -0.78
HMGN1-209ENST00000463631 CRYGAP11844 174 aa10.15□□□□□ -0.78
HMGN1-209ENST00000463631 RPL28P46779 137 aaKnown RBP10.15□□□□□ -0.78
HMGN1-209ENST00000463631 Q8IZM0 81 aa10.15□□□□□ -0.78
HMGN1-209ENST00000463631 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
HMGN1-209ENST00000463631 BCE1O60756 84 aa10.14□□□□□ -0.79
HMGN1-209ENST00000463631 PRSS2P07478 247 aa10.14□□□□□ -0.79
HMGN1-209ENST00000463631 CKS1BP61024 79 aa10.14□□□□□ -0.79
HMGN1-209ENST00000463631 Q6ZN92 141 aa10.14□□□□□ -0.79
HMGN1-209ENST00000463631 LINC00173Q6ZV60 143 aa10.14□□□□□ -0.79
HMGN1-209ENST00000463631 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
HMGN1-209ENST00000463631 MRPL55Q7Z7F7 128 aaKnown RBP10.13□□□□□ -0.79
HMGN1-209ENST00000463631 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
HMGN1-209ENST00000463631 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
HMGN1-209ENST00000463631 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
HMGN1-209ENST00000463631 KRTAP9-6A0A140TA67 174 aa10.12□□□□□ -0.79
HMGN1-209ENST00000463631 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
HMGN1-209ENST00000463631 NPSP0C0P6 89 aa10.12□□□□□ -0.79
HMGN1-209ENST00000463631 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
HMGN1-209ENST00000463631 PRELID3AQ96N28 172 aa10.12□□□□□ -0.79
HMGN1-209ENST00000463631 AMELXQ99217 191 aa10.12□□□□□ -0.79
HMGN1-209ENST00000463631 C6orf226Q5I0X4 101 aa10.11□□□□□ -0.79
HMGN1-209ENST00000463631 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
HMGN1-209ENST00000463631 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
HMGN1-209ENST00000463631 TOMM7Q9P0U1 55 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms