RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 K7EMI3 77 aa11.83□□□□□ -0.52
CDKN1A-206ENST00000462537 NDUFA5Q16718 116 aa11.83□□□□□ -0.52
CDKN1A-206ENST00000462537 IGLV4-69A0A075B6H9 119 aa11.82□□□□□ -0.52
CDKN1A-206ENST00000462537 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
CDKN1A-206ENST00000462537 SYCNQ0VAF6 134 aa11.82□□□□□ -0.52
CDKN1A-206ENST00000462537 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
CDKN1A-206ENST00000462537 TEX43Q6ZNM6 134 aa11.82□□□□□ -0.52
CDKN1A-206ENST00000462537 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
CDKN1A-206ENST00000462537 SPACA4Q8TDM5 124 aa11.82□□□□□ -0.52
CDKN1A-206ENST00000462537 MT-ND6P03923 174 aa11.81□□□□□ -0.52
CDKN1A-206ENST00000462537 Q6ZN92 141 aa11.81□□□□□ -0.52
CDKN1A-206ENST00000462537 MRPL18Q9H0U6 180 aaKnown RBP11.81□□□□□ -0.52
CDKN1A-206ENST00000462537 PKIGQ9Y2B9 76 aa11.81□□□□□ -0.52
CDKN1A-206ENST00000462537 TGIF2-C20orf24A0A0A6YYL0 155 aa11.8□□□□□ -0.52
CDKN1A-206ENST00000462537 SNAPINO95295 136 aa11.8□□□□□ -0.52
CDKN1A-206ENST00000462537 FABP9Q0Z7S8 132 aa11.8□□□□□ -0.52
CDKN1A-206ENST00000462537 MAJINQ3KP22 176 aa11.8□□□□□ -0.52
CDKN1A-206ENST00000462537 CAMK2N2Q96S95 79 aa11.8□□□□□ -0.52
CDKN1A-206ENST00000462537 C2orf88Q9BSF0 95 aa11.8□□□□□ -0.52
CDKN1A-206ENST00000462537 A0A087WYN8 130 aa11.79□□□□□ -0.52
CDKN1A-206ENST00000462537 G0S2P27469 103 aa11.79□□□□□ -0.52
CDKN1A-206ENST00000462537 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
CDKN1A-206ENST00000462537 SPAG11BQ08648 103 aa11.79□□□□□ -0.52
CDKN1A-206ENST00000462537 SVBPQ8N300 66 aa11.79□□□□□ -0.52
CDKN1A-206ENST00000462537 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
CDKN1A-206ENST00000462537 ALKBH7Q9BT30 221 aaPredicted RBP11.79□□□□□ -0.52
CDKN1A-206ENST00000462537 IGHV3OR16-9A0A0B4J2B5 98 aa11.78□□□□□ -0.52
CDKN1A-206ENST00000462537 ZC2HC1BQ5TFG8 222 aa11.78□□□□□ -0.52
CDKN1A-206ENST00000462537 Q6ZRU5 148 aa11.78□□□□□ -0.52
CDKN1A-206ENST00000462537 OR10D4PQ8NGN7 298 aa11.78□□□□□ -0.52
CDKN1A-206ENST00000462537 VCX2Q9H322 139 aa11.78□□□□□ -0.52
CDKN1A-206ENST00000462537 A0A096LNI7 61 aa11.77□□□□□ -0.53
CDKN1A-206ENST00000462537 C2orf48Q96LS8 159 aa11.77□□□□□ -0.53
CDKN1A-206ENST00000462537 NPSP0C0P6 89 aa11.76□□□□□ -0.53
CDKN1A-206ENST00000462537 LINC00242Q5T6M2 205 aa11.76□□□□□ -0.53
CDKN1A-206ENST00000462537 TOMM6Q96B49 74 aa11.76□□□□□ -0.53
CDKN1A-206ENST00000462537 IGIPA6NJ69 53 aa11.75□□□□□ -0.53
CDKN1A-206ENST00000462537 UBE2D1P51668 147 aa11.75□□□□□ -0.53
CDKN1A-206ENST00000462537 PAPPA-AS1Q5QFB9 102 aa11.75□□□□□ -0.53
CDKN1A-206ENST00000462537 LINC00173Q6ZV60 143 aa11.75□□□□□ -0.53
CDKN1A-206ENST00000462537 STPG4Q8N801 248 aa11.75□□□□□ -0.53
CDKN1A-206ENST00000462537 LOC107984640A0A0U1RRK4 108 aa11.74□□□□□ -0.53
CDKN1A-206ENST00000462537 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
CDKN1A-206ENST00000462537 AMELXQ99217 191 aa11.74□□□□□ -0.53
CDKN1A-206ENST00000462537 SMCO4Q9NRQ5 59 aa11.74□□□□□ -0.53
CDKN1A-206ENST00000462537 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
CDKN1A-206ENST00000462537 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
CDKN1A-206ENST00000462537 TRAPPC1Q9Y5R8 145 aa11.74□□□□□ -0.53
CDKN1A-206ENST00000462537 A0A087WZ39 114 aa11.73□□□□□ -0.53
CDKN1A-206ENST00000462537 KRTAP10-4P60372 401 aaPredicted RBP11.73□□□□□ -0.53
CDKN1A-206ENST00000462537 SCGB3A1Q96QR1 104 aa11.73□□□□□ -0.53
CDKN1A-206ENST00000462537 TIMM17AQ99595 171 aa11.73□□□□□ -0.53
CDKN1A-206ENST00000462537 GAGE2BQ13066 116 aa11.72□□□□□ -0.53
CDKN1A-206ENST00000462537 NDUFA1O15239 70 aa11.71□□□□□ -0.53
CDKN1A-206ENST00000462537 RPL18AQ02543 176 aaKnown RBP11.71□□□□□ -0.53
CDKN1A-206ENST00000462537 ERASQ7Z444 233 aa11.71□□□□□ -0.53
CDKN1A-206ENST00000462537 C7orf33Q8WU49 177 aa11.71□□□□□ -0.53
CDKN1A-206ENST00000462537 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
CDKN1A-206ENST00000462537 LINC01546A6NGU7 62 aa11.7□□□□□ -0.54
CDKN1A-206ENST00000462537 F8WDY8 70 aa11.7□□□□□ -0.54
CDKN1A-206ENST00000462537 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
CDKN1A-206ENST00000462537 FLG2Q5D862 2391 aaPredicted RBP11.7□□□□□ -0.54
CDKN1A-206ENST00000462537 LINC01549A6NIU2 74 aa11.69□□□□□ -0.54
CDKN1A-206ENST00000462537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.68□□□□□ -0.54
CDKN1A-206ENST00000462537 SEC11AP67812 179 aa11.68□□□□□ -0.54
CDKN1A-206ENST00000462537 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
CDKN1A-206ENST00000462537 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
CDKN1A-206ENST00000462537 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
CDKN1A-206ENST00000462537 FAM19A3Q7Z5A8 133 aa11.67□□□□□ -0.54
CDKN1A-206ENST00000462537 LINC01561Q8N1V8 128 aa11.67□□□□□ -0.54
CDKN1A-206ENST00000462537 MRPL35Q9NZE8 188 aaKnown RBP11.67□□□□□ -0.54
CDKN1A-206ENST00000462537 HERVK_113P63121 156 aa11.66□□□□□ -0.54
CDKN1A-206ENST00000462537 C10orf25Q5T742 122 aa11.66□□□□□ -0.54
CDKN1A-206ENST00000462537 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
CDKN1A-206ENST00000462537 J3QL48 77 aa11.65□□□□□ -0.54
CDKN1A-206ENST00000462537 PRSS2P07478 247 aa11.65□□□□□ -0.54
CDKN1A-206ENST00000462537 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
CDKN1A-206ENST00000462537 TOMM7Q9P0U1 55 aa11.65□□□□□ -0.54
CDKN1A-206ENST00000462537 MYCBP2O75592 4640 aa11.64□□□□□ -0.55
CDKN1A-206ENST00000462537 PACRGQ96M98 296 aaPredicted RBP11.64□□□□□ -0.55
CDKN1A-206ENST00000462537 C6orf48Q9UBA6 75 aa11.64□□□□□ -0.55
CDKN1A-206ENST00000462537 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
CDKN1A-206ENST00000462537 LINC00614P0C842 121 aa11.63□□□□□ -0.55
CDKN1A-206ENST00000462537 HNRNPA3P51991 378 aaKnown RBP11.63□□□□□ -0.55
CDKN1A-206ENST00000462537 C2orf82Q6UX34 121 aa11.63□□□□□ -0.55
CDKN1A-206ENST00000462537 SLC7A5P1Q8MH63 180 aa11.63□□□□□ -0.55
CDKN1A-206ENST00000462537 CBLN2Q8IUK8 224 aa11.62□□□□□ -0.55
CDKN1A-206ENST00000462537 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
CDKN1A-206ENST00000462537 YPEL4Q96NS1 127 aa11.62□□□□□ -0.55
CDKN1A-206ENST00000462537 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
CDKN1A-206ENST00000462537 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
CDKN1A-206ENST00000462537 RAB5BP61020 215 aa11.61□□□□□ -0.55
CDKN1A-206ENST00000462537 CKS1BP61024 79 aa11.61□□□□□ -0.55
CDKN1A-206ENST00000462537 PMVKQ15126 192 aa11.61□□□□□ -0.55
CDKN1A-206ENST00000462537 C6orf226Q5I0X4 101 aa11.61□□□□□ -0.55
CDKN1A-206ENST00000462537 URB1-AS1Q96HZ7 61 aa11.61□□□□□ -0.55
CDKN1A-206ENST00000462537 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
CDKN1A-206ENST00000462537 HBDP02042 147 aa11.6□□□□□ -0.55
CDKN1A-206ENST00000462537 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
CDKN1A-206ENST00000462537 Q8IZM0 81 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms