RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SMCO4Q9NRQ5 59 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 SPANXA1Q9NS26 97 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 PRYO14603 147 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 RPL39P62891 51 aaKnown RBP3.73□□□□□ -1.81
VPS36-202ENST00000462289 LINC00173Q6ZV60 143 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 CBLN2Q8IUK8 224 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 ZNF664Q8N3J9 261 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 AMELXQ99217 191 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 MAP1LC3AQ9H492 121 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 FAT1Q14517 4588 aa3.73□□□□□ -1.81
VPS36-202ENST00000462289 IGLV4-3A0A075B6K6 122 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 LINC01549A6NIU2 74 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 TMEM262E9PQX1 116 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 UBE2L6O14933 153 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 CDK2AP2O75956 126 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 FCER1GP30273 86 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 IFI27P40305 119 aaPredicted RBP3.72□□□□□ -1.81
VPS36-202ENST00000462289 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
VPS36-202ENST00000462289 KIAA1644Q3SXP7 199 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 ORMDL2Q53FV1 153 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 Q6ZUT4 128 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 SPATA12Q7Z6I5 190 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 C15orf56Q8N910 161 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 DEFB104AQ8WTQ1 72 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 TMEM18Q96B42 140 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 TOMM6Q96B49 74 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 TIMM17AQ99595 171 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 Q9HAA7 133 aa3.72□□□□□ -1.81
VPS36-202ENST00000462289 IGKV2D-24A0A075B6R9 120 aa3.71□□□□□ -1.82
VPS36-202ENST00000462289 GVQW2A0A096LPI5 108 aaPredicted RBP3.71□□□□□ -1.82
VPS36-202ENST00000462289 CRPP02741 224 aa3.71□□□□□ -1.82
VPS36-202ENST00000462289 SMAGPQ0VAQ4 97 aa3.71□□□□□ -1.82
VPS36-202ENST00000462289 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
VPS36-202ENST00000462289 CD164L2Q6UWJ8 174 aa3.71□□□□□ -1.82
VPS36-202ENST00000462289 C2orf66Q6UXQ4 117 aa3.71□□□□□ -1.82
VPS36-202ENST00000462289 CHCHD10Q8WYQ3 142 aaPredicted RBP3.71□□□□□ -1.82
VPS36-202ENST00000462289 TRAPPC1Q9Y5R8 145 aa3.71□□□□□ -1.82
VPS36-202ENST00000462289 IGLV5-45A0A087WSX0 123 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 C1orf196B1AJZ1 125 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 EPM2AB3EWF7 344 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 USP17L23D6RBM5 183 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 PRSS1P07477 247 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 G0S2P27469 103 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 UBE2D1P51668 147 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 KRTAP10-1P60331 282 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 FABP9Q0Z7S8 132 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 C14orf177Q52M58 125 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 PDZD11Q5EBL8 140 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 AMMECR1LQ6DCA0 310 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 DGAT2L7PQ6IED9 249 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 RNASEKQ6P5S7 137 aaKnown RBP3.7□□□□□ -1.82
VPS36-202ENST00000462289 CLPSL2Q6UWE3 100 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 ERASQ7Z444 233 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 LINC01561Q8N1V8 128 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 BAALCQ8WXS3 180 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 TMEM101Q96IK0 257 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 CYSLTR1Q9Y271 337 aa3.7□□□□□ -1.82
VPS36-202ENST00000462289 VPS13BQ7Z7G8 4022 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 LOC389332A0A1B0GUA5 103 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 PSCAO43653 123 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 LINC00614P0C842 121 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 RAB5AP20339 215 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 XGP55808 180 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 TMEM141Q96I45 108 aa3.69□□□□□ -1.82
VPS36-202ENST00000462289 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
VPS36-202ENST00000462289 IGLV10-54A0A075B6I4 117 aa3.68□□□□□ -1.82
VPS36-202ENST00000462289 A0A087WZ39 114 aa3.68□□□□□ -1.82
VPS36-202ENST00000462289 C16orf90A8MZG2 172 aa3.68□□□□□ -1.82
VPS36-202ENST00000462289 TRGC2P03986 189 aa3.68□□□□□ -1.82
VPS36-202ENST00000462289 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
VPS36-202ENST00000462289 COA6Q5JTJ3 125 aaKnown RBP3.68□□□□□ -1.82
VPS36-202ENST00000462289 SDIM1Q6ZPB5 146 aa3.68□□□□□ -1.82
VPS36-202ENST00000462289 CHCHD1Q96BP2 118 aaKnown RBP3.68□□□□□ -1.82
VPS36-202ENST00000462289 SRRM2Q9UQ35 2752 aaKnown RBP3.67□□□□□ -1.82
VPS36-202ENST00000462289 IGHV1-58A0A0C4DH39 117 aa3.67□□□□□ -1.82
VPS36-202ENST00000462289 F8WDY8 70 aa3.67□□□□□ -1.82
VPS36-202ENST00000462289 LECT2O14960 151 aa3.67□□□□□ -1.82
VPS36-202ENST00000462289 HBDP02042 147 aa3.67□□□□□ -1.82
VPS36-202ENST00000462289 COX6A2Q02221 97 aa3.67□□□□□ -1.82
VPS36-202ENST00000462289 SS18Q15532 418 aa3.67□□□□□ -1.82
VPS36-202ENST00000462289 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
VPS36-202ENST00000462289 PAPPA-AS1Q5QFB9 102 aa3.67□□□□□ -1.82
VPS36-202ENST00000462289 IGHV3-64A0A075B6Q5 118 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 IGLV5-52A0A0A0MRZ9 124 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 TRAV13-1A0A0B4J241 112 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 SCO1O75880 301 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 S100A1P23297 94 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 FUSP35637 526 aaKnown RBP eCLIP3.66□□□□□ -1.82
VPS36-202ENST00000462289 XCL1P47992 114 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 RAB5BP61020 215 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 CFAP161Q6P656 301 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 TEX43Q6ZNM6 134 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 FA2HQ7L5A8 372 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 OR10D4PQ8NGN7 298 aa3.66□□□□□ -1.82
VPS36-202ENST00000462289 C2orf48Q96LS8 159 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms