RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 LINC01545Q5VT33 79 aa6.62□□□□□ -1.35
DDX39B-215ENST00000462256 MUC4Q99102 2169 aa6.62□□□□□ -1.35
DDX39B-215ENST00000462256 XCL1P47992 114 aa6.62□□□□□ -1.35
DDX39B-215ENST00000462256 LELP1Q5T871 98 aa6.62□□□□□ -1.35
DDX39B-215ENST00000462256 IFITM1P13164 125 aa6.62□□□□□ -1.35
DDX39B-215ENST00000462256 PCP2Q8IVA1 136 aa6.62□□□□□ -1.35
DDX39B-215ENST00000462256 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
DDX39B-215ENST00000462256 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
DDX39B-215ENST00000462256 NHP2Q9NX24 153 aaKnown RBP6.61□□□□□ -1.35
DDX39B-215ENST00000462256 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.61□□□□□ -1.35
DDX39B-215ENST00000462256 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
DDX39B-215ENST00000462256 NMUP48645 174 aa6.61□□□□□ -1.35
DDX39B-215ENST00000462256 CHCHD1Q96BP2 118 aaKnown RBP6.61□□□□□ -1.35
DDX39B-215ENST00000462256 C19orf71A6NCJ1 209 aa6.6□□□□□ -1.35
DDX39B-215ENST00000462256 PRO0461Q9UI25 63 aa6.6□□□□□ -1.35
DDX39B-215ENST00000462256 IGLC6P0CF74 106 aa6.6□□□□□ -1.35
DDX39B-215ENST00000462256 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
DDX39B-215ENST00000462256 MRPL51Q4U2R6 128 aaKnown RBP6.6□□□□□ -1.35
DDX39B-215ENST00000462256 CIRBPQ14011 172 aaKnown RBP6.6□□□□□ -1.35
DDX39B-215ENST00000462256 SCGB1D4Q6XE38 83 aa6.6□□□□□ -1.35
DDX39B-215ENST00000462256 SMIM2Q9BVW6 85 aa6.6□□□□□ -1.35
DDX39B-215ENST00000462256 LOC100131303A0A0U1RQF7 123 aa6.59□□□□□ -1.35
DDX39B-215ENST00000462256 E9PLD3 99 aa6.59□□□□□ -1.35
DDX39B-215ENST00000462256 RNASE3P12724 160 aaKnown RBP6.59□□□□□ -1.35
DDX39B-215ENST00000462256 PIK3CD-AS1Q5SR53 167 aa6.59□□□□□ -1.35
DDX39B-215ENST00000462256 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.59□□□□□ -1.36
DDX39B-215ENST00000462256 LOC107984156A0A0G2JMH3 177 aa6.59□□□□□ -1.36
DDX39B-215ENST00000462256 ARL17AQ8IVW1 177 aa6.59□□□□□ -1.36
DDX39B-215ENST00000462256 C9orf85Q96MD7 179 aa6.59□□□□□ -1.36
DDX39B-215ENST00000462256 ZC2HC1BQ5TFG8 222 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 RPL39LQ96EH5 51 aaKnown RBP6.58□□□□□ -1.36
DDX39B-215ENST00000462256 C2orf48Q96LS8 159 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 TTTY13Q9BZ97 58 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 J3KT08 172 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 C11orf21Q9P2W6 132 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 A0A1B0GXF2 115 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 HBDP02042 147 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 FHL2Q14192 279 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
DDX39B-215ENST00000462256 IGLV2-11P01706 119 aa6.57□□□□□ -1.36
DDX39B-215ENST00000462256 C2orf66Q6UXQ4 117 aa6.57□□□□□ -1.36
DDX39B-215ENST00000462256 LGALS3P17931 250 aaKnown RBP6.57□□□□□ -1.36
DDX39B-215ENST00000462256 LINC00269Q8N2A0 174 aa6.57□□□□□ -1.36
DDX39B-215ENST00000462256 STAB2Q8WWQ8 2551 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 CRIP1P50238 77 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 TIRAPP58753 221 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 CARD19Q96LW7 228 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 SMCPP49901 116 aaPredicted RBP6.56□□□□□ -1.36
DDX39B-215ENST00000462256 LINC00322Q6ZN03 302 aaPredicted RBP6.56□□□□□ -1.36
DDX39B-215ENST00000462256 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 COX7A2LO14548 114 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 LECT2O14960 151 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 REG3AQ06141 175 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 C5orf38Q86SI9 138 aa6.56□□□□□ -1.36
DDX39B-215ENST00000462256 HERVK_113P63121 156 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 NEXN-AS1Q8NBZ9 246 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 MIAQ16674 131 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
DDX39B-215ENST00000462256 LGALS9CQ6DKI2 356 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 NPYP01303 97 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 C1orf195Q5TG92 126 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 Q8N8P6 123 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 SPANXA1Q9NS26 97 aa6.55□□□□□ -1.36
DDX39B-215ENST00000462256 C6orf223Q8N319 242 aa6.54□□□□□ -1.36
DDX39B-215ENST00000462256 GATD1Q8NB37 220 aa6.54□□□□□ -1.36
DDX39B-215ENST00000462256 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
DDX39B-215ENST00000462256 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
DDX39B-215ENST00000462256 CHAC1Q9BUX1 264 aa6.54□□□□□ -1.36
DDX39B-215ENST00000462256 H3BNG1 76 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 PSMB2P49721 201 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 CSNK1G2-AS1Q8NCQ2 148 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 DSCR8Q96T75 97 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 LINC00158P58513 81 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 IGKV2D-26A0A0A0MRZ7 120 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 TMEM141Q96I45 108 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 CUBNO60494 3623 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 TRAV8-4A0A0B4J246 113 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 UBE2BP63146 152 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 ESRGQ1W209 222 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 C11orf72Q8NBR9 251 aa6.53□□□□□ -1.36
DDX39B-215ENST00000462256 NBDYA0A0U1RRE5 68 aa6.52□□□□□ -1.37
DDX39B-215ENST00000462256 CEND1Q8N111 149 aa6.52□□□□□ -1.37
DDX39B-215ENST00000462256 M0QY20 66 aa6.52□□□□□ -1.37
DDX39B-215ENST00000462256 IFI27L1Q96BM0 104 aa6.52□□□□□ -1.37
DDX39B-215ENST00000462256 IGHV3-64A0A075B6Q5 118 aa6.52□□□□□ -1.37
DDX39B-215ENST00000462256 WFDC10BQ8IUB3 73 aa6.52□□□□□ -1.37
DDX39B-215ENST00000462256 GIG44P09565 113 aaPredicted RBP6.51□□□□□ -1.37
DDX39B-215ENST00000462256 TMEM126AQ9H061 195 aa6.51□□□□□ -1.37
DDX39B-215ENST00000462256 NBEAL2Q6ZNJ1 2754 aa6.51□□□□□ -1.37
DDX39B-215ENST00000462256 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
DDX39B-215ENST00000462256 IGKV2-24A0A0C4DH68 120 aa6.51□□□□□ -1.37
DDX39B-215ENST00000462256 RPL18AQ02543 176 aaKnown RBP6.51□□□□□ -1.37
DDX39B-215ENST00000462256 GAGE2AQ6NT46 116 aa6.51□□□□□ -1.37
DDX39B-215ENST00000462256 PPDPFLQ8WWR9 84 aa6.51□□□□□ -1.37
DDX39B-215ENST00000462256 COPS9Q8WXC6 57 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms