RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 LINC00337Q8N6G1 96 aa13.07□□□□□ -0.32
HPS3-204ENST00000462030 ZFYVE26Q68DK2 2539 aa13.06□□□□□ -0.32
HPS3-204ENST00000462030 UBE2L6O14933 153 aa13.06□□□□□ -0.32
HPS3-204ENST00000462030 SDIM1Q6ZPB5 146 aa13.06□□□□□ -0.32
HPS3-204ENST00000462030 MIR7-3HGQ8N6C7 128 aa13.06□□□□□ -0.32
HPS3-204ENST00000462030 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
HPS3-204ENST00000462030 NOP10Q9NPE3 64 aaKnown RBP13.05□□□□□ -0.32
HPS3-204ENST00000462030 IGKV2-28A0A075B6P5 120 aa13.05□□□□□ -0.32
HPS3-204ENST00000462030 IGKV2D-28P01615 120 aa13.05□□□□□ -0.32
HPS3-204ENST00000462030 CRPP02741 224 aa13.05□□□□□ -0.32
HPS3-204ENST00000462030 FAM222AQ5U5X8 452 aa13.05□□□□□ -0.32
HPS3-204ENST00000462030 TMEM243Q9BU79 118 aa13.05□□□□□ -0.32
HPS3-204ENST00000462030 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
HPS3-204ENST00000462030 RPL28P46779 137 aaKnown RBP13.04□□□□□ -0.32
HPS3-204ENST00000462030 TOMM7Q9P0U1 55 aa13.04□□□□□ -0.32
HPS3-204ENST00000462030 TRAV13-2A0A0B4J235 113 aa13.04□□□□□ -0.32
HPS3-204ENST00000462030 IGKV3OR2-268A0A0C4DH90 116 aa13.04□□□□□ -0.32
HPS3-204ENST00000462030 GAGE2AQ6NT46 116 aa13.04□□□□□ -0.32
HPS3-204ENST00000462030 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
HPS3-204ENST00000462030 MALP21145 153 aa13.03□□□□□ -0.32
HPS3-204ENST00000462030 FAM110AQ9BQ89 295 aa13.03□□□□□ -0.32
HPS3-204ENST00000462030 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
HPS3-204ENST00000462030 C11orf44Q8N8P7 122 aa13.03□□□□□ -0.32
HPS3-204ENST00000462030 PPDPFQ9H3Y8 114 aa13.03□□□□□ -0.32
HPS3-204ENST00000462030 SND1-IT1Q9HBX3 110 aa13.03□□□□□ -0.32
HPS3-204ENST00000462030 PTPN13Q12923 2485 aa13.01□□□□□ -0.33
HPS3-204ENST00000462030 A0A087WYN8 130 aa13.01□□□□□ -0.33
HPS3-204ENST00000462030 A0A1W2PRX2 142 aa13.01□□□□□ -0.33
HPS3-204ENST00000462030 PF4P02776 101 aa13.01□□□□□ -0.33
HPS3-204ENST00000462030 INAFM2P0DMQ5 153 aa13.01□□□□□ -0.33
HPS3-204ENST00000462030 C9orf129Q5T035 196 aaKnown RBP13.01□□□□□ -0.33
HPS3-204ENST00000462030 ABCA12Q86UK0 2595 aa13.01□□□□□ -0.33
HPS3-204ENST00000462030 SMIM11BQ8TCY0 68 aa13□□□□□ -0.33
HPS3-204ENST00000462030 LINC00158P58513 81 aa12.99□□□□□ -0.33
HPS3-204ENST00000462030 ZNF462Q96JM2 2506 aa12.98□□□□□ -0.33
HPS3-204ENST00000462030 IGLV4-60A0A075B6I1 120 aa12.98□□□□□ -0.33
HPS3-204ENST00000462030 C5orf38Q86SI9 138 aa12.98□□□□□ -0.33
HPS3-204ENST00000462030 TRAV25A0A0B4J276 109 aa12.98□□□□□ -0.33
HPS3-204ENST00000462030 PLAC8L1A1L4L8 177 aa12.98□□□□□ -0.33
HPS3-204ENST00000462030 CCL18P55774 89 aa12.98□□□□□ -0.33
HPS3-204ENST00000462030 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
HPS3-204ENST00000462030 PRB1P04280 392 aa12.97□□□□□ -0.33
HPS3-204ENST00000462030 GIG44P09565 113 aaPredicted RBP12.97□□□□□ -0.33
HPS3-204ENST00000462030 EPG5Q9HCE0 2579 aa12.97□□□□□ -0.33
HPS3-204ENST00000462030 TMEM126AQ9H061 195 aa12.97□□□□□ -0.33
HPS3-204ENST00000462030 JMJD1CQ15652 2540 aa12.96□□□□□ -0.33
HPS3-204ENST00000462030 TLN2Q9Y4G6 2542 aa12.96□□□□□ -0.33
HPS3-204ENST00000462030 DNAL4O96015 105 aa12.96□□□□□ -0.33
HPS3-204ENST00000462030 C9orf153Q5TBE3 101 aa12.96□□□□□ -0.33
HPS3-204ENST00000462030 C3orf22Q8N5N4 141 aa12.96□□□□□ -0.33
HPS3-204ENST00000462030 WFDC10AQ9H1F0 79 aa12.96□□□□□ -0.33
HPS3-204ENST00000462030 NBPF19A0A087WUL8 3843 aa12.96□□□□□ -0.34
HPS3-204ENST00000462030 ATP5G1P05496 136 aa12.96□□□□□ -0.34
HPS3-204ENST00000462030 PLA2G2AP14555 144 aa12.96□□□□□ -0.34
HPS3-204ENST00000462030 NAV2Q8IVL1 2488 aa12.96□□□□□ -0.34
HPS3-204ENST00000462030 ZNF469Q96JG9 3925 aaPredicted RBP12.95□□□□□ -0.34
HPS3-204ENST00000462030 CXCL5P42830 114 aa12.95□□□□□ -0.34
HPS3-204ENST00000462030 KRTAP10-9P60411 292 aa12.95□□□□□ -0.34
HPS3-204ENST00000462030 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
HPS3-204ENST00000462030 IGHV3OR16-9A0A0B4J2B5 98 aa12.94□□□□□ -0.34
HPS3-204ENST00000462030 PFN2P35080 140 aa12.94□□□□□ -0.34
HPS3-204ENST00000462030 SETXQ7Z333 2677 aaKnown RBP12.93□□□□□ -0.34
HPS3-204ENST00000462030 TRBV6-4A0A1B0GX49 114 aa12.93□□□□□ -0.34
HPS3-204ENST00000462030 CCL24O00175 119 aa12.93□□□□□ -0.34
HPS3-204ENST00000462030 UQCRQO14949 82 aa12.93□□□□□ -0.34
HPS3-204ENST00000462030 OVOL2Q9BRP0 275 aa12.93□□□□□ -0.34
HPS3-204ENST00000462030 TRGV4A0A0C4DH28 118 aa12.92□□□□□ -0.34
HPS3-204ENST00000462030 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
HPS3-204ENST00000462030 NIPBLQ6KC79 2804 aaeCLIP12.92□□□□□ -0.34
HPS3-204ENST00000462030 LECT2O14960 151 aa12.91□□□□□ -0.34
HPS3-204ENST00000462030 RPL35AP18077 110 aaKnown RBP12.91□□□□□ -0.34
HPS3-204ENST00000462030 SONP18583 2426 aaKnown RBP12.91□□□□□ -0.34
HPS3-204ENST00000462030 LRRC75A-AS1Q8N1F1 130 aa12.91□□□□□ -0.34
HPS3-204ENST00000462030 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.34
HPS3-204ENST00000462030 IBA57-AS1B1ANH7 110 aa12.9□□□□□ -0.34
HPS3-204ENST00000462030 C11orf68Q9H3H3 251 aaKnown RBP12.9□□□□□ -0.34
HPS3-204ENST00000462030 LINC00526Q96FQ7 95 aa12.9□□□□□ -0.34
HPS3-204ENST00000462030 NF1P21359 2839 aa12.9□□□□□ -0.34
HPS3-204ENST00000462030 H0YGX0 51 aa12.89□□□□□ -0.35
HPS3-204ENST00000462030 PAX4O43316 350 aa12.89□□□□□ -0.35
HPS3-204ENST00000462030 A0A087WZ39 114 aa12.89□□□□□ -0.35
HPS3-204ENST00000462030 SLPIP03973 132 aa12.89□□□□□ -0.35
HPS3-204ENST00000462030 OR13C6PQ8NH95 151 aa12.89□□□□□ -0.35
HPS3-204ENST00000462030 HIST1H4AP62805 103 aaKnown RBP12.88□□□□□ -0.35
HPS3-204ENST00000462030 NCR3O14931 201 aa12.88□□□□□ -0.35
HPS3-204ENST00000462030 OBSCN-AS1Q96MR7 158 aa12.88□□□□□ -0.35
HPS3-204ENST00000462030 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
HPS3-204ENST00000462030 IGKV3D-7A0A0C4DH55 119 aa12.87□□□□□ -0.35
HPS3-204ENST00000462030 FHL2Q14192 279 aa12.87□□□□□ -0.35
HPS3-204ENST00000462030 C2orf48Q96LS8 159 aa12.87□□□□□ -0.35
HPS3-204ENST00000462030 KLK5Q9Y337 293 aaPredicted RBP12.87□□□□□ -0.35
HPS3-204ENST00000462030 COX7CP15954 63 aa12.87□□□□□ -0.35
HPS3-204ENST00000462030 USP24Q9UPU5 2620 aa12.86□□□□□ -0.35
HPS3-204ENST00000462030 DNAJC9-AS1A6NH13 148 aa12.86□□□□□ -0.35
HPS3-204ENST00000462030 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
HPS3-204ENST00000462030 CSNK1G2-AS1Q8NCQ2 148 aa12.85□□□□□ -0.35
HPS3-204ENST00000462030 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
HPS3-204ENST00000462030 LINC00959A0A1B0GUT2 108 aa12.84□□□□□ -0.35
HPS3-204ENST00000462030 C19orf73Q9NVV2 129 aa12.83□□□□□ -0.36
HPS3-204ENST00000462030 ATOX1O00244 68 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms