RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
TRAPPC12-213ENST00000461577 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
TRAPPC12-213ENST00000461577 NPSP0C0P6 89 aa6.82□□□□□ -1.32
TRAPPC12-213ENST00000461577 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
TRAPPC12-213ENST00000461577 SCXQ7RTU7 201 aa6.82□□□□□ -1.32
TRAPPC12-213ENST00000461577 LINC00526Q96FQ7 95 aa6.82□□□□□ -1.32
TRAPPC12-213ENST00000461577 VCX2Q9H322 139 aa6.82□□□□□ -1.32
TRAPPC12-213ENST00000461577 IGIPA6NJ69 53 aa6.81□□□□□ -1.32
TRAPPC12-213ENST00000461577 Q5VSD8 79 aa6.81□□□□□ -1.32
TRAPPC12-213ENST00000461577 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
TRAPPC12-213ENST00000461577 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
TRAPPC12-213ENST00000461577 DPH3Q96FX2 82 aa6.81□□□□□ -1.32
TRAPPC12-213ENST00000461577 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 LINC01549A6NIU2 74 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 SYCNQ0VAF6 134 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 ZC2HC1BQ5TFG8 222 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 CIRBP-AS1Q8TBR5 109 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 SCGB3A1Q96QR1 104 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 AMELXQ99217 191 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 PKIGQ9Y2B9 76 aa6.8□□□□□ -1.32
TRAPPC12-213ENST00000461577 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 IGLV4-69A0A075B6H9 119 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 UBE2D1P51668 147 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 COX6A2Q02221 97 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 SPAG11BQ08648 103 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 ERASQ7Z444 233 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 CBLN2Q8IUK8 224 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 LINC00528Q8N1L1 170 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 OR10D4PQ8NGN7 298 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 CAMK2N2Q96S95 79 aa6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC12-213ENST00000461577 RAB5BP61020 215 aa6.78□□□□□ -1.32
TRAPPC12-213ENST00000461577 LINC00173Q6ZV60 143 aa6.78□□□□□ -1.32
TRAPPC12-213ENST00000461577 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
TRAPPC12-213ENST00000461577 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
TRAPPC12-213ENST00000461577 YPEL4Q96NS1 127 aa6.78□□□□□ -1.32
TRAPPC12-213ENST00000461577 IGKV2-24A0A0C4DH68 120 aa6.77□□□□□ -1.33
TRAPPC12-213ENST00000461577 PANO1I0J062 215 aa6.77□□□□□ -1.33
TRAPPC12-213ENST00000461577 PLA2G1BP04054 148 aaKnown RBP6.77□□□□□ -1.33
TRAPPC12-213ENST00000461577 LINC00614P0C842 121 aa6.77□□□□□ -1.33
TRAPPC12-213ENST00000461577 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
TRAPPC12-213ENST00000461577 SEC11AP67812 179 aa6.77□□□□□ -1.33
TRAPPC12-213ENST00000461577 Q6ZRU5 148 aa6.77□□□□□ -1.33
TRAPPC12-213ENST00000461577 A0A087WZ39 114 aa6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 F8WDY8 70 aa6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 HERVK_113P63121 156 aa6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 CIRBPQ14011 172 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 GEMIN7Q9H840 131 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-213ENST00000461577 LOC107984640A0A0U1RRK4 108 aa6.75□□□□□ -1.33
TRAPPC12-213ENST00000461577 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC12-213ENST00000461577 NDUFA1O15239 70 aa6.75□□□□□ -1.33
TRAPPC12-213ENST00000461577 INAFM2P0DMQ5 153 aa6.75□□□□□ -1.33
TRAPPC12-213ENST00000461577 FAM19A3Q7Z5A8 133 aa6.75□□□□□ -1.33
TRAPPC12-213ENST00000461577 FAT1Q14517 4588 aa6.75□□□□□ -1.33
TRAPPC12-213ENST00000461577 A0A087WYN8 130 aa6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 A0A096LNI7 61 aa6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 HBDP02042 147 aa6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 PMVKQ15126 192 aa6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 URB1-AS1Q96HZ7 61 aa6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 PACRGQ96M98 296 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
TRAPPC12-213ENST00000461577 PRSS2P07478 247 aa6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 NDUFA6P56556 154 aa6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 PMCHL1Q16048 86 aa6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 RNF151Q2KHN1 245 aa6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 STPG4Q8N801 248 aa6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 CST9LQ9H4G1 147 aa6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
TRAPPC12-213ENST00000461577 A0A096LNJ9 63 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 TRGC2P03986 189 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 RPL37AP61513 92 aaKnown RBP6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 LINC00469Q8N7U9 141 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 CHCHD1Q96BP2 118 aaKnown RBP6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
TRAPPC12-213ENST00000461577 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.33
TRAPPC12-213ENST00000461577 ATP5LO75964 103 aa6.71□□□□□ -1.34
TRAPPC12-213ENST00000461577 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
TRAPPC12-213ENST00000461577 KIAA0087Q14695 138 aa6.71□□□□□ -1.34
TRAPPC12-213ENST00000461577 BAGE3Q86Y29 109 aa6.71□□□□□ -1.34
TRAPPC12-213ENST00000461577 CKS1BP61024 79 aa6.7□□□□□ -1.34
TRAPPC12-213ENST00000461577 PDZD11Q5EBL8 140 aa6.7□□□□□ -1.34
TRAPPC12-213ENST00000461577 C6orf226Q5I0X4 101 aa6.7□□□□□ -1.34
TRAPPC12-213ENST00000461577 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
TRAPPC12-213ENST00000461577 Q8IZM0 81 aa6.7□□□□□ -1.34
TRAPPC12-213ENST00000461577 C7orf33Q8WU49 177 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms