RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 COX11Q9Y6N1 276 aa6.76□□□□□ -1.33
SYN3-206ENST00000461446 IGIPA6NJ69 53 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 PCP4L1A6NKN8 68 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 HSBP1L1C9JCN9 74 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 ODF1Q14990 250 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 ATOH7Q8N100 152 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 SPANXA1Q9NS26 97 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 PAM16Q9Y3D7 125 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 LRP1BQ9NZR2 4599 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 RYR1P21817 5038 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
SYN3-206ENST00000461446 IGKV2D-24A0A075B6R9 120 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 A0A087WTM6 91 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 TRAV8-4A0A0B4J246 113 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 PSCAO43653 123 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 NPSP0C0P6 89 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 SPATA45Q537H7 98 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 PAPPA-AS1Q5QFB9 102 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 BAALCQ8WXS3 180 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 PMCHL2Q9BQD1 86 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 C1orf43Q9BWL3 253 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 PRO1933Q9H354 126 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 PYGO1Q9Y3Y4 419 aa6.74□□□□□ -1.33
SYN3-206ENST00000461446 IGKV3OR2-268A0A0C4DH90 116 aa6.73□□□□□ -1.33
SYN3-206ENST00000461446 CDK2AP2O75956 126 aa6.73□□□□□ -1.33
SYN3-206ENST00000461446 DPM2O94777 84 aa6.73□□□□□ -1.33
SYN3-206ENST00000461446 MRPS36P82909 103 aaKnown RBP6.73□□□□□ -1.33
SYN3-206ENST00000461446 KRTAP26-1Q6PEX3 210 aa6.73□□□□□ -1.33
SYN3-206ENST00000461446 MAPKAPK5-AS1Q8N8E1 139 aa6.73□□□□□ -1.33
SYN3-206ENST00000461446 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
SYN3-206ENST00000461446 CHTOPQ9Y3Y2 248 aaKnown RBP6.73□□□□□ -1.33
SYN3-206ENST00000461446 HSPG2P98160 4391 aa6.73□□□□□ -1.33
SYN3-206ENST00000461446 IGLV10-54A0A075B6I4 117 aa6.72□□□□□ -1.33
SYN3-206ENST00000461446 F8VRH5 84 aa6.72□□□□□ -1.33
SYN3-206ENST00000461446 EREGO14944 169 aa6.72□□□□□ -1.33
SYN3-206ENST00000461446 IGKCP01834 107 aa6.72□□□□□ -1.33
SYN3-206ENST00000461446 PMVKQ15126 192 aa6.72□□□□□ -1.33
SYN3-206ENST00000461446 Q6ZUT4 128 aa6.72□□□□□ -1.33
SYN3-206ENST00000461446 OPRPNQ99935 248 aaPredicted RBP6.72□□□□□ -1.33
SYN3-206ENST00000461446 MRPL35Q9NZE8 188 aaKnown RBP6.72□□□□□ -1.33
SYN3-206ENST00000461446 IGLV4-3A0A075B6K6 122 aa6.71□□□□□ -1.34
SYN3-206ENST00000461446 LINC00959A0A1B0GUT2 108 aa6.71□□□□□ -1.34
SYN3-206ENST00000461446 hDV102S1A0JD36 115 aa6.71□□□□□ -1.34
SYN3-206ENST00000461446 LRCOL1A6NCL2 159 aa6.71□□□□□ -1.34
SYN3-206ENST00000461446 PLNP26678 52 aa6.71□□□□□ -1.34
SYN3-206ENST00000461446 RNASE13Q5GAN3 156 aaKnown RBP6.71□□□□□ -1.34
SYN3-206ENST00000461446 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.34
SYN3-206ENST00000461446 CCL25O15444 150 aa6.7□□□□□ -1.34
SYN3-206ENST00000461446 SS18Q15532 418 aa6.7□□□□□ -1.34
SYN3-206ENST00000461446 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
SYN3-206ENST00000461446 CHCHD10Q8WYQ3 142 aaPredicted RBP6.7□□□□□ -1.34
SYN3-206ENST00000461446 VCX2Q9H322 139 aa6.7□□□□□ -1.34
SYN3-206ENST00000461446 CST9LQ9H4G1 147 aa6.7□□□□□ -1.34
SYN3-206ENST00000461446 DNAH5Q8TE73 4624 aa6.7□□□□□ -1.34
SYN3-206ENST00000461446 TRAV13-1A0A0B4J241 112 aa6.69□□□□□ -1.34
SYN3-206ENST00000461446 IGLC3P0DOY3 106 aa6.69□□□□□ -1.34
SYN3-206ENST00000461446 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
SYN3-206ENST00000461446 AMELXQ99217 191 aa6.69□□□□□ -1.34
SYN3-206ENST00000461446 MIEN1Q9BRT3 115 aa6.69□□□□□ -1.34
SYN3-206ENST00000461446 UQCR10Q9UDW1 63 aa6.69□□□□□ -1.34
SYN3-206ENST00000461446 APOBP04114 4563 aaKnown RBP6.69□□□□□ -1.34
SYN3-206ENST00000461446 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
SYN3-206ENST00000461446 DDTP30046 118 aa6.68□□□□□ -1.34
SYN3-206ENST00000461446 XCL1P47992 114 aa6.68□□□□□ -1.34
SYN3-206ENST00000461446 WFDC2Q14508 124 aa6.68□□□□□ -1.34
SYN3-206ENST00000461446 LECT2O14960 151 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 FOXI1Q12951 378 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 ANKRD39Q53RE8 183 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 CD164L2Q6UWJ8 174 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 STPG4Q8N801 248 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 Q8N814 137 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 C14orf144Q96I85 54 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 C2orf88Q9BSF0 95 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
SYN3-206ENST00000461446 IGLV4-69A0A075B6H9 119 aa6.66□□□□□ -1.34
SYN3-206ENST00000461446 C11orf86A6NJI1 115 aa6.66□□□□□ -1.34
SYN3-206ENST00000461446 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
SYN3-206ENST00000461446 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 LINC00587B1AMM8 73 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 USP17L23D6RBM5 183 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 COX8AP10176 69 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 GCSHP23434 173 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 UBE2D1P51668 147 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 XGP55808 180 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 HERVK_113P61574 105 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 C14orf177Q52M58 125 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 Q8N1X5 172 aa6.65□□□□□ -1.34
SYN3-206ENST00000461446 IGHV3OR16-9A0A0B4J2B5 98 aa6.64□□□□□ -1.35
SYN3-206ENST00000461446 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
SYN3-206ENST00000461446 HNRNPA3P51991 378 aaKnown RBP6.64□□□□□ -1.35
SYN3-206ENST00000461446 HAMPP81172 84 aa6.64□□□□□ -1.35
SYN3-206ENST00000461446 TMEM170BQ5T4T1 132 aa6.64□□□□□ -1.35
SYN3-206ENST00000461446 CFAP161Q6P656 301 aa6.64□□□□□ -1.35
SYN3-206ENST00000461446 CHAC1Q9BUX1 264 aa6.64□□□□□ -1.35
SYN3-206ENST00000461446 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
SYN3-206ENST00000461446 COX7A2LO14548 114 aa6.63□□□□□ -1.35
SYN3-206ENST00000461446 DLEU1O43261 78 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms