RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 IGHV1-58A0A0C4DH39 117 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 K7EIL1 84 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 IGHV3-30-3P0DP02 117 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
MSH2-204ENST00000461394 COX6A2Q02221 97 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 SS18Q15532 418 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 TAL2Q16559 108 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 LINC00242Q5T6M2 205 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 CLPSL2Q6UWE3 100 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 Q6ZTC4 211 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 CEND1Q8N111 149 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 RAB37Q96AX2 223 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 CDKN2A-AS1Q9UH64 79 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 JMJD1CQ15652 2540 aa4.73□□□□□ -1.65
MSH2-204ENST00000461394 FLNBO75369 2602 aaKnown RBP4.72□□□□□ -1.65
MSH2-204ENST00000461394 USP17L23D6RBM5 183 aa4.72□□□□□ -1.65
MSH2-204ENST00000461394 ANGP03950 147 aaKnown RBP4.72□□□□□ -1.65
MSH2-204ENST00000461394 SMIM13P0DJ93 91 aa4.72□□□□□ -1.65
MSH2-204ENST00000461394 RBX1P62877 108 aa4.72□□□□□ -1.65
MSH2-204ENST00000461394 NHP2Q9NX24 153 aaKnown RBP4.72□□□□□ -1.65
MSH2-204ENST00000461394 NDUFA12Q9UI09 145 aa4.72□□□□□ -1.65
MSH2-204ENST00000461394 TENM1Q9UKZ4 2725 aa4.72□□□□□ -1.65
MSH2-204ENST00000461394 NOTCH3Q9UM47 2321 aa4.72□□□□□ -1.65
MSH2-204ENST00000461394 DEFB131BA0A096LNP1 70 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 TMEM238C9JI98 176 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 FXYD2P54710 66 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 VAMP3Q15836 100 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 KPRPQ5T749 579 aaPredicted RBP4.71□□□□□ -1.66
MSH2-204ENST00000461394 LELP1Q5T871 98 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 SERTAD4-AS1Q5TG53 156 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 Q6ZVH6 145 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 TOMM7Q9P0U1 55 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 COX11Q9Y6N1 276 aa4.71□□□□□ -1.66
MSH2-204ENST00000461394 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 A0A0J9YXY3 114 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 LINC00959A0A1B0GUT2 108 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 A0A1B0GUV1 79 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 K7ERJ3 54 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 TAX1BP3O14907 124 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 CCL25O15444 150 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 IGHV3-30P01768 117 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 IGHV3-33P01772 117 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 IGHV3-30-5P0DP03 117 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 XCL1P47992 114 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 CIRBPQ14011 172 aaKnown RBP4.7□□□□□ -1.66
MSH2-204ENST00000461394 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 FAM19A3Q7Z5A8 133 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 C5orf38Q86SI9 138 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
MSH2-204ENST00000461394 TRAV10A0A0B4J240 114 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 A4D1N5 150 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 SMIM1B2RUZ4 78 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 H3BUT2 72 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 K7EP13 123 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 NDUFA1O15239 70 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 APOMO95445 188 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 CRPP02741 224 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 PRSS2P07478 247 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 NPC2P61916 151 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 ZFAND6Q6FIF0 208 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 LYPD5Q6UWN5 251 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 COX7B2Q8TF08 81 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 ZNF625Q96I27 306 aaPredicted RBP4.69□□□□□ -1.66
MSH2-204ENST00000461394 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
MSH2-204ENST00000461394 TM2D3Q9BRN9 247 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 TM2D2Q9BX73 214 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 Q9H8V8 135 aa4.69□□□□□ -1.66
MSH2-204ENST00000461394 SPANXB1Q9NS25 103 aaPredicted RBP4.69□□□□□ -1.66
MSH2-204ENST00000461394 NIPBLQ6KC79 2804 aaeCLIP4.68□□□□□ -1.66
MSH2-204ENST00000461394 IGLV10-54A0A075B6I4 117 aa4.68□□□□□ -1.66
MSH2-204ENST00000461394 A0A0U1RRA0 63 aa4.68□□□□□ -1.66
MSH2-204ENST00000461394 H3BNG1 76 aa4.68□□□□□ -1.66
MSH2-204ENST00000461394 RPL24P83731 157 aaKnown RBP4.68□□□□□ -1.66
MSH2-204ENST00000461394 REG3AQ06141 175 aa4.68□□□□□ -1.66
MSH2-204ENST00000461394 C10orf126Q8N4M7 172 aa4.68□□□□□ -1.66
MSH2-204ENST00000461394 FBN1P35555 2871 aaKnown RBP4.67□□□□□ -1.66
MSH2-204ENST00000461394 VWFP04275 2813 aa4.67□□□□□ -1.66
MSH2-204ENST00000461394 COX7A2LO14548 114 aa4.67□□□□□ -1.66
MSH2-204ENST00000461394 HERV-K104P63124 156 aa4.67□□□□□ -1.66
MSH2-204ENST00000461394 LURAP1LQ8IV03 231 aa4.67□□□□□ -1.66
MSH2-204ENST00000461394 MUSTN1Q8IVN3 82 aa4.67□□□□□ -1.66
MSH2-204ENST00000461394 Q8N3U1 123 aa4.67□□□□□ -1.66
MSH2-204ENST00000461394 CHCHD10Q8WYQ3 142 aaPredicted RBP4.67□□□□□ -1.66
MSH2-204ENST00000461394 KLK12Q9UKR0 248 aa4.67□□□□□ -1.66
MSH2-204ENST00000461394 A0A087WZ39 114 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 IGLV5-39A0A0G2JS06 123 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 GAGE12HA6NDE8 117 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 FABP2P12104 132 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 MIAQ16674 131 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 Q1RN00 199 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 C6orf226Q5I0X4 101 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 WFDC10BQ8IUB3 73 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 C15orf53Q8NAA6 179 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 COPS9Q8WXC6 57 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 UBE2WQ96B02 151 aa4.66□□□□□ -1.66
MSH2-204ENST00000461394 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.65□□□□□ -1.67
MSH2-204ENST00000461394 IGHV3OR16-9A0A0B4J2B5 98 aa4.65□□□□□ -1.67
MSH2-204ENST00000461394 IGLL5B9A064 214 aa4.65□□□□□ -1.67
MSH2-204ENST00000461394 H7C2G1 150 aa4.65□□□□□ -1.67
MSH2-204ENST00000461394 TIMM17BO60830 172 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms