RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SDHAF1A6NFY7 115 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 K7EP13 123 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 MPV17L2Q567V2 206 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 ATP5L2Q7Z4Y8 100 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 Q8N976 141 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 TMEM70Q9BUB7 260 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 CHCHD7Q9BUK0 85 aa5.29□□□□□ -1.56
ECHDC1-212ENST00000461239 TRAV9-2A0A087WT02 112 aa5.28□□□□□ -1.56
ECHDC1-212ENST00000461239 IGHV1-24A0A0C4DH33 117 aa5.28□□□□□ -1.56
ECHDC1-212ENST00000461239 TRBV27A0A0K0K1C4 114 aa5.28□□□□□ -1.56
ECHDC1-212ENST00000461239 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-212ENST00000461239 KCNIP4Q6PIL6 250 aa5.28□□□□□ -1.56
ECHDC1-212ENST00000461239 ENHOQ6UWT2 76 aa5.28□□□□□ -1.56
ECHDC1-212ENST00000461239 C10orf126Q8N4M7 172 aa5.28□□□□□ -1.56
ECHDC1-212ENST00000461239 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 TRBV25-1A0A075B6N4 114 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 PCP4L1A6NKN8 68 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 D6R8Y8 96 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 NPYP01303 97 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 ESDP10768 282 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 RBX1P62877 108 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 TMEM97Q5BJF2 176 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 KRTAP5-11Q6L8G4 156 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 TMEM136Q6ZRR5 245 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 C20orf203Q8NBC4 194 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 ST20Q9HBF5 79 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 KLK12Q9UKR0 248 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 URGCP-MRPS24S4R325 110 aa5.27□□□□□ -1.57
ECHDC1-212ENST00000461239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 IGKV2-29A2NJV5 120 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 TMEM262E9PQX1 116 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 I3L3M4 83 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BKO60814 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BJP06899 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BOP23527 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 CKS2P33552 79 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BBP33778 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BDP58876 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BCP62807 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 COTL1Q14019 142 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 LAGE3Q14657 143 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST2H2BEQ16778 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 COX19Q49B96 90 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BHQ93079 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BNQ99877 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST1H2BMQ99879 126 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 TMEM243Q9BU79 118 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
ECHDC1-212ENST00000461239 A0A087WX48 190 aa5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 PMCHP20382 165 aa5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 FUSP35637 526 aaKnown RBP eCLIP5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 NDUFA6P56556 154 aa5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 RPL32P62910 135 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 WFDC2Q14508 124 aa5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 KRTAP26-1Q6PEX3 210 aa5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
ECHDC1-212ENST00000461239 APOBP04114 4563 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 A0A087WTM6 91 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 TGIF2-C20orf24A0A0A6YYL0 155 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 PPP1R17O96001 155 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 ANGP03950 147 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 TRGC2P03986 189 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 ORMDL3Q8N138 153 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 HIST3H2BBQ8N257 126 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 FAM104AQ969W3 186 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 UBE2WQ96B02 151 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 PRELID3AQ96N28 172 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 C20orf78Q9BR46 151 aa5.24□□□□□ -1.57
ECHDC1-212ENST00000461239 TRAV8-3A0A0A6YYJ7 113 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 TSTD3H0UI37 97 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 PHOX2AO14813 284 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 TCAPO15273 167 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 APCSP02743 223 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 PPBPP02775 128 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 FGF6P10767 208 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 PKIAP61925 76 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 CLPSL2Q6UWE3 100 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 PACRGQ96M98 296 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 SMIM2Q9BVW6 85 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 DNAH8Q96JB1 4490 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
ECHDC1-212ENST00000461239 HSPG2P98160 4391 aa5.22□□□□□ -1.57
ECHDC1-212ENST00000461239 JOSD1Q15040 202 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-212ENST00000461239 SPATA12Q7Z6I5 190 aa5.22□□□□□ -1.57
ECHDC1-212ENST00000461239 MRPL52Q86TS9 123 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-212ENST00000461239 GNB1LQ9BYB4 327 aa5.22□□□□□ -1.57
ECHDC1-212ENST00000461239 RYR1P21817 5038 aa5.22□□□□□ -1.57
ECHDC1-212ENST00000461239 IGKV2D-24A0A075B6R9 120 aa5.21□□□□□ -1.58
ECHDC1-212ENST00000461239 LOC389332A0A1B0GUA5 103 aa5.21□□□□□ -1.58
ECHDC1-212ENST00000461239 UBE2L6O14933 153 aa5.21□□□□□ -1.58
ECHDC1-212ENST00000461239 LECT2O14960 151 aa5.21□□□□□ -1.58
ECHDC1-212ENST00000461239 RPL39P62891 51 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-212ENST00000461239 REG3AQ06141 175 aa5.21□□□□□ -1.58
ECHDC1-212ENST00000461239 Q0VG73 95 aa5.21□□□□□ -1.58
ECHDC1-212ENST00000461239 MAJINQ3KP22 176 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms