RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 Q8N6K4 173 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 PLCE1Q9P212 2302 aa6.54□□□□□ -1.36
BRCA1-205ENST00000461221 TMEM131Q92545 1883 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 PCOTHQ58A44 107 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 C11orf21Q9P2W6 132 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 FSHBP01225 129 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 Q9BRP9 147 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 hDV103S1A0JD37 113 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 IGIPA6NJ69 53 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 IGLV1-40P01703 118 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 ANAPC1Q9H1A4 1944 aa6.53□□□□□ -1.36
BRCA1-205ENST00000461221 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 SPINK1P00995 79 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 Q6ZPA2 131 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 PCNX2A6NKB5 2137 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 TNCP24821 2201 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 Q8N3U1 123 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 PLA2G5P39877 138 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 BEAN1Q3B7T3 259 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 C6orf223Q8N319 242 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 LIMD2Q9BT23 127 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
BRCA1-205ENST00000461221 DSCAML1Q8TD84 2053 aa6.51□□□□□ -1.37
BRCA1-205ENST00000461221 CACNA1HO95180 2353 aa6.51□□□□□ -1.37
BRCA1-205ENST00000461221 PSPHP1O15172 72 aa6.51□□□□□ -1.37
BRCA1-205ENST00000461221 DENND4AQ7Z401 1863 aa6.51□□□□□ -1.37
BRCA1-205ENST00000461221 A0A087WVE0 104 aa6.51□□□□□ -1.37
BRCA1-205ENST00000461221 RETNLBQ9BQ08 111 aa6.51□□□□□ -1.37
BRCA1-205ENST00000461221 A0A087WYN8 130 aa6.5□□□□□ -1.37
BRCA1-205ENST00000461221 CSDC2Q9Y534 153 aaKnown RBP6.5□□□□□ -1.37
BRCA1-205ENST00000461221 WISP2O76076 250 aa6.5□□□□□ -1.37
BRCA1-205ENST00000461221 PLXNB3Q9ULL4 1909 aa6.5□□□□□ -1.37
BRCA1-205ENST00000461221 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
BRCA1-205ENST00000461221 SHANK1Q9Y566 2161 aa6.5□□□□□ -1.37
BRCA1-205ENST00000461221 HCG22E2RYF7 251 aa6.5□□□□□ -1.37
BRCA1-205ENST00000461221 CRYGAP11844 174 aa6.49□□□□□ -1.37
BRCA1-205ENST00000461221 LINC01556Q5JQF7 62 aa6.49□□□□□ -1.37
BRCA1-205ENST00000461221 A0A087WSZ3 146 aa6.48□□□□□ -1.37
BRCA1-205ENST00000461221 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
BRCA1-205ENST00000461221 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
BRCA1-205ENST00000461221 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
BRCA1-205ENST00000461221 LINC01561Q8N1V8 128 aa6.47□□□□□ -1.37
BRCA1-205ENST00000461221 C9orf116Q5BN46 136 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-205ENST00000461221 CRIP3Q6Q6R5 217 aa6.47□□□□□ -1.37
BRCA1-205ENST00000461221 DENND4CQ5VZ89 1909 aa6.47□□□□□ -1.37
BRCA1-205ENST00000461221 RIF1Q5UIP0 2472 aaKnown RBP6.46□□□□□ -1.37
BRCA1-205ENST00000461221 GAS8-AS1O95177 125 aa6.46□□□□□ -1.38
BRCA1-205ENST00000461221 PCNX1Q96RV3 2341 aa6.46□□□□□ -1.38
BRCA1-205ENST00000461221 PRM2P04554 102 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 COX6A2Q02221 97 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 CXCL6P80162 114 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 Q8N2B8 174 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 C1orf64Q8NEQ6 169 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 ADAMTS9Q9P2N4 1935 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 CRIP2P52943 208 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-205ENST00000461221 SBSPONQ8IVN8 264 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 AMELXQ99217 191 aa6.45□□□□□ -1.38
BRCA1-205ENST00000461221 ODF3L2Q3SX64 289 aa6.44□□□□□ -1.38
BRCA1-205ENST00000461221 IGLV4-60A0A075B6I1 120 aa6.44□□□□□ -1.38
BRCA1-205ENST00000461221 A0A1B0GU69 56 aa6.44□□□□□ -1.38
BRCA1-205ENST00000461221 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
BRCA1-205ENST00000461221 FHL2Q14192 279 aa6.44□□□□□ -1.38
BRCA1-205ENST00000461221 GPR179Q6PRD1 2367 aa6.44□□□□□ -1.38
BRCA1-205ENST00000461221 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
BRCA1-205ENST00000461221 OXLD1Q5BKU9 147 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 NCOA6Q14686 2063 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-205ENST00000461221 ARHGAP21Q5T5U3 1957 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 C1orf134Q5TEV5 83 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 HIVEP2P31629 2446 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 A0A1B0GUV1 79 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 TSPEAR-AS2P59090 65 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 SPAG11AQ6PDA7 123 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 TP53AIP1Q9HCN2 124 aa6.43□□□□□ -1.38
BRCA1-205ENST00000461221 IGLV1-51P01701 117 aa6.42□□□□□ -1.38
BRCA1-205ENST00000461221 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
BRCA1-205ENST00000461221 NBASA2RRP1 2371 aa6.42□□□□□ -1.38
BRCA1-205ENST00000461221 COL4A3Q01955 1670 aa6.42□□□□□ -1.38
BRCA1-205ENST00000461221 ADAMTSL4-AS1Q5T5F5 129 aa6.42□□□□□ -1.38
BRCA1-205ENST00000461221 ACYP2P14621 99 aa6.41□□□□□ -1.38
BRCA1-205ENST00000461221 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
BRCA1-205ENST00000461221 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
BRCA1-205ENST00000461221 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
BRCA1-205ENST00000461221 DEFB116Q30KQ4 102 aa6.41□□□□□ -1.38
BRCA1-205ENST00000461221 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
BRCA1-205ENST00000461221 Q6ZTC4 211 aa6.41□□□□□ -1.38
BRCA1-205ENST00000461221 MED13LQ71F56 2210 aa6.4□□□□□ -1.38
BRCA1-205ENST00000461221 PRLHP81277 87 aa6.4□□□□□ -1.38
BRCA1-205ENST00000461221 URB1-AS1Q96HZ7 61 aa6.39□□□□□ -1.39
BRCA1-205ENST00000461221 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
BRCA1-205ENST00000461221 NOTCH4Q99466 2003 aa6.39□□□□□ -1.39
BRCA1-205ENST00000461221 KIF26AQ9ULI4 1882 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-205ENST00000461221 ZNF106Q9H2Y7 1883 aaKnown RBP6.39□□□□□ -1.39
BRCA1-205ENST00000461221 BCE1O60756 84 aa6.39□□□□□ -1.39
BRCA1-205ENST00000461221 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
BRCA1-205ENST00000461221 ALPK3Q96L96 1907 aa6.39□□□□□ -1.39
BRCA1-205ENST00000461221 BRI3O95415 125 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms