RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.17□□□□□ -0.3
SCAF8-204ENST00000461219 ABCA13Q86UQ4 5058 aa13.16□□□□□ -0.3
SCAF8-204ENST00000461219 TGIF2-C20orf24A0A0A6YYL0 155 aa13.16□□□□□ -0.3
SCAF8-204ENST00000461219 COX6A2Q02221 97 aa13.16□□□□□ -0.3
SCAF8-204ENST00000461219 FABP9Q0Z7S8 132 aa13.16□□□□□ -0.3
SCAF8-204ENST00000461219 SYCNQ0VAF6 134 aa13.15□□□□□ -0.3
SCAF8-204ENST00000461219 MRPL18Q9H0U6 180 aaKnown RBP13.15□□□□□ -0.3
SCAF8-204ENST00000461219 DNAH8Q96JB1 4490 aa13.15□□□□□ -0.3
SCAF8-204ENST00000461219 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
SCAF8-204ENST00000461219 IGKV2-24A0A0C4DH68 120 aa13.14□□□□□ -0.31
SCAF8-204ENST00000461219 IGLV4-69A0A075B6H9 119 aa13.13□□□□□ -0.31
SCAF8-204ENST00000461219 CHTF8P0CG12 524 aa13.13□□□□□ -0.31
SCAF8-204ENST00000461219 CAMK2N2Q96S95 79 aa13.13□□□□□ -0.31
SCAF8-204ENST00000461219 VCX2Q9H322 139 aa13.13□□□□□ -0.31
SCAF8-204ENST00000461219 SMCO4Q9NRQ5 59 aa13.13□□□□□ -0.31
SCAF8-204ENST00000461219 SPAG11BQ08648 103 aa13.12□□□□□ -0.31
SCAF8-204ENST00000461219 MAJINQ3KP22 176 aa13.12□□□□□ -0.31
SCAF8-204ENST00000461219 PAPPA-AS1Q5QFB9 102 aa13.12□□□□□ -0.31
SCAF8-204ENST00000461219 FA2HQ7L5A8 372 aa13.11□□□□□ -0.31
SCAF8-204ENST00000461219 ORAOV1Q8WV07 137 aa13.11□□□□□ -0.31
SCAF8-204ENST00000461219 PANO1I0J062 215 aa13.1□□□□□ -0.31
SCAF8-204ENST00000461219 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
SCAF8-204ENST00000461219 FAM104AQ969W3 186 aa13.1□□□□□ -0.31
SCAF8-204ENST00000461219 ALKBH7Q9BT30 221 aaPredicted RBP13.1□□□□□ -0.31
SCAF8-204ENST00000461219 TRAPPC1Q9Y5R8 145 aa13.1□□□□□ -0.31
SCAF8-204ENST00000461219 NPSP0C0P6 89 aa13.09□□□□□ -0.31
SCAF8-204ENST00000461219 SPACA4Q8TDM5 124 aa13.09□□□□□ -0.31
SCAF8-204ENST00000461219 A0A087WYN8 130 aa13.08□□□□□ -0.32
SCAF8-204ENST00000461219 IGHV3OR16-9A0A0B4J2B5 98 aa13.08□□□□□ -0.32
SCAF8-204ENST00000461219 RPL37AP61513 92 aaKnown RBP13.08□□□□□ -0.32
SCAF8-204ENST00000461219 LINC00474Q9P2X8 69 aa13.08□□□□□ -0.32
SCAF8-204ENST00000461219 FAT1Q14517 4588 aa13.07□□□□□ -0.32
SCAF8-204ENST00000461219 CIRBPQ14011 172 aaKnown RBP13.07□□□□□ -0.32
SCAF8-204ENST00000461219 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
SCAF8-204ENST00000461219 C2orf48Q96LS8 159 aa13.07□□□□□ -0.32
SCAF8-204ENST00000461219 SCGB3A1Q96QR1 104 aa13.07□□□□□ -0.32
SCAF8-204ENST00000461219 LOC107984640A0A0U1RRK4 108 aa13.06□□□□□ -0.32
SCAF8-204ENST00000461219 LINC01549A6NIU2 74 aa13.06□□□□□ -0.32
SCAF8-204ENST00000461219 LINC00242Q5T6M2 205 aa13.06□□□□□ -0.32
SCAF8-204ENST00000461219 Q6ZRU5 148 aa13.06□□□□□ -0.32
SCAF8-204ENST00000461219 A0A096LNI7 61 aa13.05□□□□□ -0.32
SCAF8-204ENST00000461219 IGIPA6NJ69 53 aa13.05□□□□□ -0.32
SCAF8-204ENST00000461219 UBE2D1P51668 147 aa13.05□□□□□ -0.32
SCAF8-204ENST00000461219 ZC2HC1BQ5TFG8 222 aa13.05□□□□□ -0.32
SCAF8-204ENST00000461219 STPG4Q8N801 248 aa13.05□□□□□ -0.32
SCAF8-204ENST00000461219 TIMM17AQ99595 171 aa13.05□□□□□ -0.32
SCAF8-204ENST00000461219 SRRM2Q9UQ35 2752 aaKnown RBP13.05□□□□□ -0.32
SCAF8-204ENST00000461219 NDUFA1O15239 70 aa13.04□□□□□ -0.32
SCAF8-204ENST00000461219 SEC11AP67812 179 aa13.04□□□□□ -0.32
SCAF8-204ENST00000461219 GAGE2BQ13066 116 aa13.04□□□□□ -0.32
SCAF8-204ENST00000461219 C7orf33Q8WU49 177 aa13.04□□□□□ -0.32
SCAF8-204ENST00000461219 AMELXQ99217 191 aa13.04□□□□□ -0.32
SCAF8-204ENST00000461219 A0A087WZ39 114 aa13.03□□□□□ -0.32
SCAF8-204ENST00000461219 RPL18AQ02543 176 aaKnown RBP13.03□□□□□ -0.32
SCAF8-204ENST00000461219 ERASQ7Z444 233 aa13.03□□□□□ -0.32
SCAF8-204ENST00000461219 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
SCAF8-204ENST00000461219 VPS13BQ7Z7G8 4022 aa13.03□□□□□ -0.32
SCAF8-204ENST00000461219 F8WDY8 70 aa13.02□□□□□ -0.33
SCAF8-204ENST00000461219 PRSS2P07478 247 aa13.01□□□□□ -0.33
SCAF8-204ENST00000461219 LINC00173Q6ZV60 143 aa13.01□□□□□ -0.33
SCAF8-204ENST00000461219 PACRGQ96M98 296 aaPredicted RBP13.01□□□□□ -0.33
SCAF8-204ENST00000461219 PLAC8Q9NZF1 115 aa13.01□□□□□ -0.33
SCAF8-204ENST00000461219 HERVK_113P63121 156 aa13□□□□□ -0.33
SCAF8-204ENST00000461219 FLG2Q5D862 2391 aaPredicted RBP13□□□□□ -0.33
SCAF8-204ENST00000461219 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
SCAF8-204ENST00000461219 A0A0J9YXV3 536 aa12.98□□□□□ -0.33
SCAF8-204ENST00000461219 LINC01546A6NGU7 62 aa12.98□□□□□ -0.33
SCAF8-204ENST00000461219 TOMM7Q9P0U1 55 aa12.98□□□□□ -0.33
SCAF8-204ENST00000461219 RAB5BP61020 215 aa12.97□□□□□ -0.33
SCAF8-204ENST00000461219 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
SCAF8-204ENST00000461219 LINC01561Q8N1V8 128 aa12.97□□□□□ -0.33
SCAF8-204ENST00000461219 MRPL35Q9NZE8 188 aaKnown RBP12.97□□□□□ -0.33
SCAF8-204ENST00000461219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.96□□□□□ -0.33
SCAF8-204ENST00000461219 LINC00614P0C842 121 aa12.96□□□□□ -0.33
SCAF8-204ENST00000461219 C18orf32Q8TCD1 76 aa12.96□□□□□ -0.33
SCAF8-204ENST00000461219 J3QL48 77 aa12.95□□□□□ -0.34
SCAF8-204ENST00000461219 NDUFA6P56556 154 aa12.95□□□□□ -0.34
SCAF8-204ENST00000461219 CKS1BP61024 79 aa12.95□□□□□ -0.34
SCAF8-204ENST00000461219 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
SCAF8-204ENST00000461219 LINC00469Q8N7U9 141 aa12.95□□□□□ -0.34
SCAF8-204ENST00000461219 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
SCAF8-204ENST00000461219 FAM19A3Q7Z5A8 133 aa12.94□□□□□ -0.34
SCAF8-204ENST00000461219 SLC7A5P1Q8MH63 180 aa12.94□□□□□ -0.34
SCAF8-204ENST00000461219 PMVKQ15126 192 aa12.93□□□□□ -0.34
SCAF8-204ENST00000461219 CDKN2A-AS1Q9UH64 79 aa12.93□□□□□ -0.34
SCAF8-204ENST00000461219 HBDP02042 147 aa12.92□□□□□ -0.34
SCAF8-204ENST00000461219 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
SCAF8-204ENST00000461219 CBLN2Q8IUK8 224 aa12.92□□□□□ -0.34
SCAF8-204ENST00000461219 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
SCAF8-204ENST00000461219 KRTAP10-4P60372 401 aaPredicted RBP12.91□□□□□ -0.34
SCAF8-204ENST00000461219 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
SCAF8-204ENST00000461219 CST9LQ9H4G1 147 aa12.91□□□□□ -0.34
SCAF8-204ENST00000461219 C6orf48Q9UBA6 75 aa12.91□□□□□ -0.34
SCAF8-204ENST00000461219 TINCRA0A1B0GVN0 87 aa12.9□□□□□ -0.34
SCAF8-204ENST00000461219 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
SCAF8-204ENST00000461219 GAGE2EQ4V326 116 aa12.9□□□□□ -0.34
SCAF8-204ENST00000461219 GAGE2DQ9UEU5 116 aa12.9□□□□□ -0.34
SCAF8-204ENST00000461219 PMCHL1Q16048 86 aa12.89□□□□□ -0.35
SCAF8-204ENST00000461219 Q8IZM0 81 aa12.89□□□□□ -0.35
SCAF8-204ENST00000461219 H3BRM9 83 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms