RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 GATD1Q8NB37 220 aa2.73□□□□□ -1.97
CNN3-204ENST00000461018 C20orf203Q8NBC4 194 aa2.73□□□□□ -1.97
CNN3-204ENST00000461018 MRAP2Q96G30 205 aa2.73□□□□□ -1.97
CNN3-204ENST00000461018 RNF185Q96GF1 192 aa2.73□□□□□ -1.97
CNN3-204ENST00000461018 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.72□□□□□ -1.97
CNN3-204ENST00000461018 SDHAF1A6NFY7 115 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 HIGD1CA8MV81 97 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 I3L3M4 83 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 PPP1R2P9O14990 202 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 TCAPO15273 167 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 HLA-DQA1P01909 254 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 APCSP02743 223 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 ESDP10768 282 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 SSTP61278 116 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 RIGQ13278 110 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 PEA15Q15121 130 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 TMEM241Q24JQ0 296 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 MRPL52Q86TS9 123 aaKnown RBP2.72□□□□□ -1.97
CNN3-204ENST00000461018 ISOC2Q96AB3 205 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 OPRPNQ99935 248 aaPredicted RBP2.72□□□□□ -1.97
CNN3-204ENST00000461018 ST20Q9HBF5 79 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 NAT8BQ9UHF3 227 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 PKIGQ9Y2B9 76 aa2.72□□□□□ -1.97
CNN3-204ENST00000461018 CSDC2Q9Y534 153 aaKnown RBP2.72□□□□□ -1.97
CNN3-204ENST00000461018 USH2AO75445 5202 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 IGLV4-60A0A075B6I1 120 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 TRBV24-1A0A075B6N3 115 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 A0A087X002 238 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 A0A0J9YXV3 536 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 SMIM27A0A1W2PRY6 76 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 LINC00862A6NCI5 91 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 S100A8P05109 93 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 FGF6P10767 208 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 RAB4AP20338 218 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 POLR2KP53803 58 aaKnown RBP2.71□□□□□ -1.98
CNN3-204ENST00000461018 RPL32P62910 135 aaKnown RBP2.71□□□□□ -1.98
CNN3-204ENST00000461018 CIRBPQ14011 172 aaKnown RBP2.71□□□□□ -1.98
CNN3-204ENST00000461018 AMMECR1LQ6DCA0 310 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 SDIM1Q6ZPB5 146 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 NUP35Q8NFH5 326 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 OR5A1Q8NGJ0 315 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 BTF3L4Q96K17 158 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 NAT8Q9UHE5 227 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 PYGO1Q9Y3Y4 419 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 V9GYV3 84 aa2.71□□□□□ -1.98
CNN3-204ENST00000461018 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
CNN3-204ENST00000461018 IGLV10-54A0A075B6I4 117 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 IGHV3-64A0A075B6Q5 118 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 GVQW2A0A096LPI5 108 aaPredicted RBP2.7□□□□□ -1.98
CNN3-204ENST00000461018 TRAV26-2A0A0B4J265 109 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 C7orf77A4D0Y5 90 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 F8W036 122 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 PHOX2AO14813 284 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 PPBPP02775 128 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 PMCHP20382 165 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 CEBPGP53567 150 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 RPL23P62829 140 aaKnown RBP2.7□□□□□ -1.98
CNN3-204ENST00000461018 PNRC1Q12796 327 aaPredicted RBP2.7□□□□□ -1.98
CNN3-204ENST00000461018 ATP5L2Q7Z4Y8 100 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 RPL39LQ96EH5 51 aaKnown RBP2.7□□□□□ -1.98
CNN3-204ENST00000461018 TMEM101Q96IK0 257 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 C20orf78Q9BR46 151 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 TIMM21Q9BVV7 248 aa2.7□□□□□ -1.98
CNN3-204ENST00000461018 LINC00959A0A1B0GUT2 108 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 A0A1B0GVG6 124 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 RPS10P46783 165 aaKnown RBP2.69□□□□□ -1.98
CNN3-204ENST00000461018 SS18Q15532 418 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 ADIRFQ15847 76 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 FAM104BQ5XKR9 115 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 RNASEKQ6P5S7 137 aaKnown RBP2.69□□□□□ -1.98
CNN3-204ENST00000461018 CLPSL2Q6UWE3 100 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 CD164L2Q6UWJ8 174 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 AMN1Q8IY45 258 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 C15orf56Q8N910 161 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 CHCHD10Q8WYQ3 142 aaPredicted RBP2.69□□□□□ -1.98
CNN3-204ENST00000461018 KIR2DL4Q99706 377 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 CDC42SE2Q9NRR3 84 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 LINC00474Q9P2X8 69 aa2.69□□□□□ -1.98
CNN3-204ENST00000461018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.68□□□□□ -1.98
CNN3-204ENST00000461018 IGHV1-58A0A0C4DH39 117 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 A0A1B0GXF2 115 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 IGKV2-29A2NJV5 120 aaPredicted RBP2.68□□□□□ -1.98
CNN3-204ENST00000461018 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 C1orf196B1AJZ1 125 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 C9JQL5 133 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 F8WDY8 70 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 K7EMI3 77 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 FCER1GP30273 86 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 RAB14P61106 215 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 HBBP68871 147 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 ADAMTSL4-AS1Q5T5F5 129 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 ZNF664Q8N3J9 261 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 TMEM242Q9NWH2 141 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 PLAC8Q9NZF1 115 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 LAMTOR2Q9Y2Q5 125 aa2.68□□□□□ -1.98
CNN3-204ENST00000461018 IGLV9-49A0A0B4J1Y8 123 aa2.67□□□□□ -1.98
CNN3-204ENST00000461018 COX7A2LO14548 114 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms