RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 TGIF2-C20orf24A0A0A6YYL0 155 aa10.22□□□□□ -0.77
GGA1-216ENST00000460957 COX6A2Q02221 97 aa10.22□□□□□ -0.77
GGA1-216ENST00000460957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
GGA1-216ENST00000460957 SYCNQ0VAF6 134 aa10.21□□□□□ -0.77
GGA1-216ENST00000460957 MRPL18Q9H0U6 180 aaKnown RBP10.21□□□□□ -0.77
GGA1-216ENST00000460957 VCX2Q9H322 139 aa10.21□□□□□ -0.77
GGA1-216ENST00000460957 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
GGA1-216ENST00000460957 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
GGA1-216ENST00000460957 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
GGA1-216ENST00000460957 CAMK2N2Q96S95 79 aa10.2□□□□□ -0.78
GGA1-216ENST00000460957 SMCO4Q9NRQ5 59 aa10.2□□□□□ -0.78
GGA1-216ENST00000460957 IGLV4-69A0A075B6H9 119 aa10.19□□□□□ -0.78
GGA1-216ENST00000460957 SPAG11BQ08648 103 aa10.19□□□□□ -0.78
GGA1-216ENST00000460957 FA2HQ7L5A8 372 aa10.19□□□□□ -0.78
GGA1-216ENST00000460957 ORAOV1Q8WV07 137 aa10.19□□□□□ -0.78
GGA1-216ENST00000460957 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
GGA1-216ENST00000460957 MAJINQ3KP22 176 aa10.18□□□□□ -0.78
GGA1-216ENST00000460957 ALKBH7Q9BT30 221 aaPredicted RBP10.18□□□□□ -0.78
GGA1-216ENST00000460957 TRAPPC1Q9Y5R8 145 aa10.18□□□□□ -0.78
GGA1-216ENST00000460957 OR10D4PQ8NGN7 298 aa10.17□□□□□ -0.78
GGA1-216ENST00000460957 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
GGA1-216ENST00000460957 PANO1I0J062 215 aa10.16□□□□□ -0.78
GGA1-216ENST00000460957 NPSP0C0P6 89 aa10.16□□□□□ -0.78
GGA1-216ENST00000460957 RPL37AP61513 92 aaKnown RBP10.16□□□□□ -0.78
GGA1-216ENST00000460957 SPACA4Q8TDM5 124 aa10.16□□□□□ -0.78
GGA1-216ENST00000460957 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
GGA1-216ENST00000460957 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
GGA1-216ENST00000460957 A0A087WYN8 130 aa10.15□□□□□ -0.78
GGA1-216ENST00000460957 IGHV3OR16-9A0A0B4J2B5 98 aa10.15□□□□□ -0.78
GGA1-216ENST00000460957 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
GGA1-216ENST00000460957 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
GGA1-216ENST00000460957 C2orf48Q96LS8 159 aa10.15□□□□□ -0.78
GGA1-216ENST00000460957 LOC107984640A0A0U1RRK4 108 aa10.14□□□□□ -0.79
GGA1-216ENST00000460957 GAGE2BQ13066 116 aa10.14□□□□□ -0.79
GGA1-216ENST00000460957 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
GGA1-216ENST00000460957 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
GGA1-216ENST00000460957 Q6ZRU5 148 aa10.14□□□□□ -0.79
GGA1-216ENST00000460957 TIMM17AQ99595 171 aa10.14□□□□□ -0.79
GGA1-216ENST00000460957 A0A096LNI7 61 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 IGIPA6NJ69 53 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 NDUFA1O15239 70 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 UBE2D1P51668 147 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 SEC11AP67812 179 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 ZC2HC1BQ5TFG8 222 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 STPG4Q8N801 248 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
GGA1-216ENST00000460957 GEMIN7Q9H840 131 aaKnown RBP10.13□□□□□ -0.79
GGA1-216ENST00000460957 PCLOQ9Y6V0 5065 aa10.12□□□□□ -0.79
GGA1-216ENST00000460957 RPL18AQ02543 176 aaKnown RBP10.12□□□□□ -0.79
GGA1-216ENST00000460957 ERASQ7Z444 233 aa10.12□□□□□ -0.79
GGA1-216ENST00000460957 AMELXQ99217 191 aa10.12□□□□□ -0.79
GGA1-216ENST00000460957 A0A087WZ39 114 aa10.11□□□□□ -0.79
GGA1-216ENST00000460957 F8WDY8 70 aa10.11□□□□□ -0.79
GGA1-216ENST00000460957 PRSS2P07478 247 aa10.11□□□□□ -0.79
GGA1-216ENST00000460957 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
GGA1-216ENST00000460957 HERVK_113P63121 156 aa10.1□□□□□ -0.79
GGA1-216ENST00000460957 LINC00173Q6ZV60 143 aa10.1□□□□□ -0.79
GGA1-216ENST00000460957 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
GGA1-216ENST00000460957 RAB5BP61020 215 aa10.09□□□□□ -0.79
GGA1-216ENST00000460957 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
GGA1-216ENST00000460957 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
GGA1-216ENST00000460957 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
GGA1-216ENST00000460957 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
GGA1-216ENST00000460957 RNF151Q2KHN1 245 aa10.08□□□□□ -0.8
GGA1-216ENST00000460957 MRPL35Q9NZE8 188 aaKnown RBP10.08□□□□□ -0.8
GGA1-216ENST00000460957 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
GGA1-216ENST00000460957 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.07□□□□□ -0.8
GGA1-216ENST00000460957 LINC00614P0C842 121 aa10.07□□□□□ -0.8
GGA1-216ENST00000460957 LINC01561Q8N1V8 128 aa10.07□□□□□ -0.8
GGA1-216ENST00000460957 C18orf32Q8TCD1 76 aa10.07□□□□□ -0.8
GGA1-216ENST00000460957 DNAH8Q96JB1 4490 aa10.07□□□□□ -0.8
GGA1-216ENST00000460957 J3QL48 77 aa10.06□□□□□ -0.8
GGA1-216ENST00000460957 NDUFA6P56556 154 aa10.06□□□□□ -0.8
GGA1-216ENST00000460957 CKS1BP61024 79 aa10.06□□□□□ -0.8
GGA1-216ENST00000460957 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
GGA1-216ENST00000460957 LINC00469Q8N7U9 141 aa10.06□□□□□ -0.8
GGA1-216ENST00000460957 PMVKQ15126 192 aa10.05□□□□□ -0.8
GGA1-216ENST00000460957 UNQ6190/PRO20217Q6UXQ8 127 aa10.05□□□□□ -0.8
GGA1-216ENST00000460957 SLC7A5P1Q8MH63 180 aa10.05□□□□□ -0.8
GGA1-216ENST00000460957 HBDP02042 147 aa10.04□□□□□ -0.8
GGA1-216ENST00000460957 FAM19A3Q7Z5A8 133 aa10.04□□□□□ -0.8
GGA1-216ENST00000460957 CDKN2A-AS1Q9UH64 79 aa10.04□□□□□ -0.8
GGA1-216ENST00000460957 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
GGA1-216ENST00000460957 C10orf25Q5T742 122 aa10.03□□□□□ -0.8
GGA1-216ENST00000460957 CBLN2Q8IUK8 224 aa10.03□□□□□ -0.8
GGA1-216ENST00000460957 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
GGA1-216ENST00000460957 GAGE2EQ4V326 116 aa10.02□□□□□ -0.81
GGA1-216ENST00000460957 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
GGA1-216ENST00000460957 CST9LQ9H4G1 147 aa10.02□□□□□ -0.81
GGA1-216ENST00000460957 C6orf48Q9UBA6 75 aa10.02□□□□□ -0.81
GGA1-216ENST00000460957 GAGE2DQ9UEU5 116 aa10.02□□□□□ -0.81
GGA1-216ENST00000460957 SRRM2Q9UQ35 2752 aaKnown RBP10.01□□□□□ -0.81
GGA1-216ENST00000460957 KIAA0087Q14695 138 aa10.01□□□□□ -0.81
GGA1-216ENST00000460957 PMCHL1Q16048 86 aa10.01□□□□□ -0.81
GGA1-216ENST00000460957 Q8IZM0 81 aa10.01□□□□□ -0.81
GGA1-216ENST00000460957 FAT1Q14517 4588 aa10.01□□□□□ -0.81
GGA1-216ENST00000460957 H3BRM9 83 aa10□□□□□ -0.81
GGA1-216ENST00000460957 ATP5LO75964 103 aa10□□□□□ -0.81
GGA1-216ENST00000460957 KRTAP10-4P60372 401 aaPredicted RBP10□□□□□ -0.81
GGA1-216ENST00000460957 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms