RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 NPSP0C0P6 89 aa8.71□□□□□ -1.02
SCAMP4-206ENST00000460767 IFI27P40305 119 aaPredicted RBP8.71□□□□□ -1.02
SCAMP4-206ENST00000460767 CIRBPQ14011 172 aaKnown RBP8.71□□□□□ -1.02
SCAMP4-206ENST00000460767 SS18Q15532 418 aa8.71□□□□□ -1.02
SCAMP4-206ENST00000460767 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
SCAMP4-206ENST00000460767 NXT2Q9NPJ8 142 aaKnown RBP8.71□□□□□ -1.02
SCAMP4-206ENST00000460767 TGIF2-C20orf24A0A0A6YYL0 155 aa8.7□□□□□ -1.02
SCAMP4-206ENST00000460767 IGHV3OR16-9A0A0B4J2B5 98 aa8.7□□□□□ -1.02
SCAMP4-206ENST00000460767 RAB5AP20339 215 aa8.7□□□□□ -1.02
SCAMP4-206ENST00000460767 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
SCAMP4-206ENST00000460767 LINC00173Q6ZV60 143 aa8.7□□□□□ -1.02
SCAMP4-206ENST00000460767 PANO1I0J062 215 aa8.69□□□□□ -1.02
SCAMP4-206ENST00000460767 ORMDL2Q53FV1 153 aa8.69□□□□□ -1.02
SCAMP4-206ENST00000460767 AMELXQ99217 191 aa8.69□□□□□ -1.02
SCAMP4-206ENST00000460767 IGHV1-58A0A0C4DH39 117 aa8.68□□□□□ -1.02
SCAMP4-206ENST00000460767 NDUFA5Q16718 116 aa8.68□□□□□ -1.02
SCAMP4-206ENST00000460767 C2orf66Q6UXQ4 117 aa8.68□□□□□ -1.02
SCAMP4-206ENST00000460767 FAM19A3Q7Z5A8 133 aa8.68□□□□□ -1.02
SCAMP4-206ENST00000460767 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
SCAMP4-206ENST00000460767 TRAV13-1A0A0B4J241 112 aa8.67□□□□□ -1.02
SCAMP4-206ENST00000460767 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
SCAMP4-206ENST00000460767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
SCAMP4-206ENST00000460767 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
SCAMP4-206ENST00000460767 SLC7A5P1Q8MH63 180 aa8.66□□□□□ -1.02
SCAMP4-206ENST00000460767 TOMM6Q96B49 74 aa8.66□□□□□ -1.02
SCAMP4-206ENST00000460767 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
SCAMP4-206ENST00000460767 TMEM141Q96I45 108 aa8.66□□□□□ -1.02
SCAMP4-206ENST00000460767 COX7A2LO14548 114 aa8.65□□□□□ -1.02
SCAMP4-206ENST00000460767 UBE2D1P51668 147 aa8.65□□□□□ -1.02
SCAMP4-206ENST00000460767 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
SCAMP4-206ENST00000460767 TIMM17AQ99595 171 aa8.65□□□□□ -1.02
SCAMP4-206ENST00000460767 AP5S1Q9NUS5 200 aa8.65□□□□□ -1.02
SCAMP4-206ENST00000460767 TNXBP22105 4242 aa8.64□□□□□ -1.03
SCAMP4-206ENST00000460767 A0A096LNJ9 63 aa8.64□□□□□ -1.03
SCAMP4-206ENST00000460767 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.64□□□□□ -1.03
SCAMP4-206ENST00000460767 FABP9Q0Z7S8 132 aa8.64□□□□□ -1.03
SCAMP4-206ENST00000460767 C18orf32Q8TCD1 76 aa8.64□□□□□ -1.03
SCAMP4-206ENST00000460767 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
SCAMP4-206ENST00000460767 IFITM10A6NMD0 228 aa8.63□□□□□ -1.03
SCAMP4-206ENST00000460767 COX6A2Q02221 97 aa8.63□□□□□ -1.03
SCAMP4-206ENST00000460767 SPACA4Q8TDM5 124 aa8.63□□□□□ -1.03
SCAMP4-206ENST00000460767 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
SCAMP4-206ENST00000460767 A0A087WZ39 114 aa8.62□□□□□ -1.03
SCAMP4-206ENST00000460767 G0S2P27469 103 aa8.62□□□□□ -1.03
SCAMP4-206ENST00000460767 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
SCAMP4-206ENST00000460767 ERASQ7Z444 233 aa8.62□□□□□ -1.03
SCAMP4-206ENST00000460767 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
SCAMP4-206ENST00000460767 C2orf48Q96LS8 159 aa8.62□□□□□ -1.03
SCAMP4-206ENST00000460767 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
SCAMP4-206ENST00000460767 KIAA0087Q14695 138 aa8.61□□□□□ -1.03
SCAMP4-206ENST00000460767 TEX43Q6ZNM6 134 aa8.61□□□□□ -1.03
SCAMP4-206ENST00000460767 LINC01561Q8N1V8 128 aa8.61□□□□□ -1.03
SCAMP4-206ENST00000460767 OR10D4PQ8NGN7 298 aa8.61□□□□□ -1.03
SCAMP4-206ENST00000460767 PRSS3P2Q8NHM4 247 aa8.61□□□□□ -1.03
SCAMP4-206ENST00000460767 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
SCAMP4-206ENST00000460767 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
SCAMP4-206ENST00000460767 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
SCAMP4-206ENST00000460767 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
SCAMP4-206ENST00000460767 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
SCAMP4-206ENST00000460767 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
SCAMP4-206ENST00000460767 VCX2Q9H322 139 aa8.59□□□□□ -1.03
SCAMP4-206ENST00000460767 SMCO4Q9NRQ5 59 aa8.59□□□□□ -1.03
SCAMP4-206ENST00000460767 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
SCAMP4-206ENST00000460767 F8WDY8 70 aa8.58□□□□□ -1.04
SCAMP4-206ENST00000460767 ZNF561-AS1K7EIQ3 104 aa8.58□□□□□ -1.04
SCAMP4-206ENST00000460767 APOMO95445 188 aa8.58□□□□□ -1.04
SCAMP4-206ENST00000460767 MALP21145 153 aa8.58□□□□□ -1.04
SCAMP4-206ENST00000460767 IGLV5-45A0A087WSX0 123 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 A0A087WYN8 130 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 A0A096LNI7 61 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 LINC00614P0C842 121 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 SPAG11BQ08648 103 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 RNF151Q2KHN1 245 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 PAPPA-AS1Q5QFB9 102 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 Q6ZN92 141 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 LINC01600Q96MT4 127 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 C2orf88Q9BSF0 95 aa8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 MRPL35Q9NZE8 188 aaKnown RBP8.57□□□□□ -1.04
SCAMP4-206ENST00000460767 PDZD11Q5EBL8 140 aa8.56□□□□□ -1.04
SCAMP4-206ENST00000460767 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
SCAMP4-206ENST00000460767 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
SCAMP4-206ENST00000460767 COLCA2A8K830 154 aa8.55□□□□□ -1.04
SCAMP4-206ENST00000460767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.55□□□□□ -1.04
SCAMP4-206ENST00000460767 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
SCAMP4-206ENST00000460767 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
SCAMP4-206ENST00000460767 CST9LQ9H4G1 147 aa8.55□□□□□ -1.04
SCAMP4-206ENST00000460767 TLX1NBP0CAT3 122 aa8.54□□□□□ -1.04
SCAMP4-206ENST00000460767 HERVK_113P63121 156 aa8.54□□□□□ -1.04
SCAMP4-206ENST00000460767 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
SCAMP4-206ENST00000460767 CDKN2A-AS1Q9UH64 79 aa8.54□□□□□ -1.04
SCAMP4-206ENST00000460767 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
SCAMP4-206ENST00000460767 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
SCAMP4-206ENST00000460767 HBDP02042 147 aa8.53□□□□□ -1.04
SCAMP4-206ENST00000460767 PTTG1IPP53801 180 aa8.53□□□□□ -1.04
SCAMP4-206ENST00000460767 SEC11AP67812 179 aa8.53□□□□□ -1.04
SCAMP4-206ENST00000460767 LINC00474Q9P2X8 69 aa8.53□□□□□ -1.04
SCAMP4-206ENST00000460767 PKIGQ9Y2B9 76 aa8.53□□□□□ -1.04
SCAMP4-206ENST00000460767 LINC00310P59036 64 aa8.52□□□□□ -1.05
SCAMP4-206ENST00000460767 RAB5BP61020 215 aa8.52□□□□□ -1.05
SCAMP4-206ENST00000460767 PMVKQ15126 192 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms