RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 NCR3O14931 201 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 Q6ZS46 218 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 CDSNQ15517 529 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 NRACQ8N912 160 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 TRAV23DV6A0A075B6W5 121 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 LST1O00453 97 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 Q6Q795 121 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 ZNF22P17026 224 aaPredicted RBP4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 Q6ZRP5 223 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 WNK2Q9Y3S1 2297 aa4.57□□□□□ -1.68
HLA-DQA1-205ENST00000460633 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 IGLV1-40P01703 118 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 EGFEM1PQ0D2K5 195 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 SPAG11AQ6PDA7 123 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 UNQ9165/PRO28630Q6UXU0 137 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 C2orf48Q96LS8 159 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 ACACAQ13085 2346 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 MED13Q9UHV7 2174 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 CRIP2P52943 208 aaPredicted RBP4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 Q6ZTI0 123 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 FREM1Q5H8C1 2179 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 DSCAML1Q8TD84 2053 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 MIR7-3HGQ8N6C7 128 aa4.56□□□□□ -1.68
HLA-DQA1-205ENST00000460633 A0A096LNJ9 63 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 PROK1P58294 105 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 GVINP1Q7Z2Y8 2422 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 ZFHX2Q9C0A1 2572 aaPredicted RBP4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 KRTAP21-3Q3LHN1 58 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 Q6ZVQ6 151 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 C20orf197Q8N268 126 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 C11orf21Q9P2W6 132 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 LINC01556Q5JQF7 62 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 Q6ZSN1 163 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 C22orf34Q6ZV56 151 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 LINC00526Q96FQ7 95 aa4.55□□□□□ -1.68
HLA-DQA1-205ENST00000460633 CRYGAP11844 174 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 LINC01561Q8N1V8 128 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 MALRD1Q5VYJ5 2156 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 IGLV4-3A0A075B6K6 122 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 COX7CP15954 63 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 KRTAP10-9P60411 292 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 EPM2AB3EWF7 344 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 CD164Q04900 197 aa4.54□□□□□ -1.68
HLA-DQA1-205ENST00000460633 IMUPQ9GZP8 106 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 NBDYA0A0U1RRE5 68 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 BPY2O14599 106 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 SLPIP03973 132 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 LINC00308Q8TCZ7 52 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 NOTCH3Q9UM47 2321 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 LINC00846Q9NV44 126 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 CREBBPQ92793 2442 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 RIF1Q5UIP0 2472 aaKnown RBP4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 CDKN2A-AS1Q9UH64 79 aa4.53□□□□□ -1.68
HLA-DQA1-205ENST00000460633 ENHOQ6UWT2 76 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 Q8N6K4 173 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 CIRBP-AS1Q8TBR5 109 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 PRR9Q5T870 116 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 FAM19A3Q7Z5A8 133 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 ATP11AUNQ6ZP68 121 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 SERP2Q8N6R1 65 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 ZFAND3Q9H8U3 227 aa4.52□□□□□ -1.69
HLA-DQA1-205ENST00000460633 CNOT1A5YKK6 2376 aaKnown RBP4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 RPL37AP8A6NKH3 93 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 M0QY20 66 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 PRR4Q16378 134 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 SPINK6Q6UWN8 80 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 COL6A6A6NMZ7 2263 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 CNFNQ9BYD5 112 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 SMIM26A0A096LP01 95 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 NDUFC2-KCTD14E9PQ53 114 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 Q6ZTC4 211 aa4.51□□□□□ -1.69
HLA-DQA1-205ENST00000460633 PTPRQQ9UMZ3 2332 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TRBV27A0A0K0K1C4 114 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 HCFC1P51610 2035 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 RNASE3P12724 160 aaKnown RBP4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TSPEAR-AS2P59090 65 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 Q8N9L7 120 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 A0A1W2PPR1 153 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 RTL8CO15255 209 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TIMM17BO60830 172 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TSHBP01222 138 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 PRR14LQ5THK1 2151 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TNCP24821 2201 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TANC2Q9HCD6 1990 aa4.5□□□□□ -1.69
HLA-DQA1-205ENST00000460633 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
HLA-DQA1-205ENST00000460633 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
HLA-DQA1-205ENST00000460633 IGIPA6NJ69 53 aa4.49□□□□□ -1.69
HLA-DQA1-205ENST00000460633 POLR2KP53803 58 aaKnown RBP4.49□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
HLA-DQA1-205ENST00000460633 Q8IZM0 81 aa4.49□□□□□ -1.69
HLA-DQA1-205ENST00000460633 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
HLA-DQA1-205ENST00000460633 TRBV6-5A0A0K0K1A5 114 aa4.48□□□□□ -1.69
HLA-DQA1-205ENST00000460633 SCXQ7RTU7 201 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms