RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 IGLV10-54A0A075B6I4 117 aa7.38□□□□□ -1.23
SMNDC1-203ENST00000460483 TRAV12-1A0A0B4J245 112 aa7.38□□□□□ -1.23
SMNDC1-203ENST00000460483 H3BRM9 83 aa7.38□□□□□ -1.23
SMNDC1-203ENST00000460483 COX7A2LO14548 114 aa7.38□□□□□ -1.23
SMNDC1-203ENST00000460483 XCL1P47992 114 aa7.38□□□□□ -1.23
SMNDC1-203ENST00000460483 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
SMNDC1-203ENST00000460483 CST9LQ9H4G1 147 aa7.38□□□□□ -1.23
SMNDC1-203ENST00000460483 A0A096LNJ9 63 aa7.37□□□□□ -1.23
SMNDC1-203ENST00000460483 FABP4P15090 132 aa7.37□□□□□ -1.23
SMNDC1-203ENST00000460483 UBE2D1P51668 147 aa7.37□□□□□ -1.23
SMNDC1-203ENST00000460483 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
SMNDC1-203ENST00000460483 TINCRA0A1B0GVN0 87 aa7.36□□□□□ -1.23
SMNDC1-203ENST00000460483 C20orf202A1L168 122 aa7.36□□□□□ -1.23
SMNDC1-203ENST00000460483 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
SMNDC1-203ENST00000460483 PRSS29PA6NIE9 313 aa7.36□□□□□ -1.23
SMNDC1-203ENST00000460483 RNASE13Q5GAN3 156 aaKnown RBP7.36□□□□□ -1.23
SMNDC1-203ENST00000460483 LINC01561Q8N1V8 128 aa7.36□□□□□ -1.23
SMNDC1-203ENST00000460483 KRTAP4-9Q9BYQ8 210 aa7.36□□□□□ -1.23
SMNDC1-203ENST00000460483 IGHV1-58A0A0C4DH39 117 aa7.35□□□□□ -1.23
SMNDC1-203ENST00000460483 PLNP26678 52 aa7.35□□□□□ -1.23
SMNDC1-203ENST00000460483 FAM19A3Q7Z5A8 133 aa7.35□□□□□ -1.23
SMNDC1-203ENST00000460483 CHTOPQ9Y3Y2 248 aaKnown RBP7.35□□□□□ -1.23
SMNDC1-203ENST00000460483 F8VRH5 84 aa7.34□□□□□ -1.23
SMNDC1-203ENST00000460483 NUPR1O60356 82 aa7.34□□□□□ -1.23
SMNDC1-203ENST00000460483 LINC00310P59036 64 aa7.34□□□□□ -1.23
SMNDC1-203ENST00000460483 LINC00242Q5T6M2 205 aa7.34□□□□□ -1.23
SMNDC1-203ENST00000460483 PET117Q6UWS5 81 aa7.34□□□□□ -1.23
SMNDC1-203ENST00000460483 SPATA12Q7Z6I5 190 aa7.34□□□□□ -1.23
SMNDC1-203ENST00000460483 PKIGQ9Y2B9 76 aa7.34□□□□□ -1.23
SMNDC1-203ENST00000460483 A0A087WZ39 114 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 IGHV3OR16-9A0A0B4J2B5 98 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 F8WDY8 70 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 FOXI1Q12951 378 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 Q6ZRN7 208 aaPredicted RBP7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 LINC00469Q8N7U9 141 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 NTN5Q8WTR8 489 aaPredicted RBP7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
SMNDC1-203ENST00000460483 H0Y8G0 127 aa7.32□□□□□ -1.24
SMNDC1-203ENST00000460483 PRSS2P07478 247 aa7.32□□□□□ -1.24
SMNDC1-203ENST00000460483 IGLC3P0DOY3 106 aa7.32□□□□□ -1.24
SMNDC1-203ENST00000460483 SNRPEP62304 92 aaKnown RBP7.32□□□□□ -1.24
SMNDC1-203ENST00000460483 FAM104AQ969W3 186 aa7.32□□□□□ -1.24
SMNDC1-203ENST00000460483 CHAC1Q9BUX1 264 aa7.32□□□□□ -1.24
SMNDC1-203ENST00000460483 A0A087WTM6 91 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 A0A0J9YXV3 536 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 SYS1-DBNDD2H3BUS1 97 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 RTL8CO15255 209 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 DPM2O94777 84 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 KRTDAPP60985 99 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 HERVK_113P61574 105 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 SFTA2Q6UW10 78 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
SMNDC1-203ENST00000460483 IGLV5-45A0A087WSX0 123 aa7.3□□□□□ -1.24
SMNDC1-203ENST00000460483 hDV102S1A0JD36 115 aa7.3□□□□□ -1.24
SMNDC1-203ENST00000460483 C5orf52A6NGY3 159 aa7.3□□□□□ -1.24
SMNDC1-203ENST00000460483 USP17L23D6RBM5 183 aa7.3□□□□□ -1.24
SMNDC1-203ENST00000460483 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
SMNDC1-203ENST00000460483 C5orf38Q86SI9 138 aa7.3□□□□□ -1.24
SMNDC1-203ENST00000460483 IGHV3-64A0A075B6Q5 118 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 GVQW2A0A096LPI5 108 aaPredicted RBP7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 IGKCP01834 107 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 CXCL5P42830 114 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 CKS1BP61024 79 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 ODF1Q14990 250 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 Q8N814 137 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 HIST1H2BLQ99880 126 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 MRPL35Q9NZE8 188 aaKnown RBP7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 CDKN2A-AS1Q9UH64 79 aa7.29□□□□□ -1.24
SMNDC1-203ENST00000460483 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
SMNDC1-203ENST00000460483 LRCOL1A6NCL2 159 aa7.28□□□□□ -1.24
SMNDC1-203ENST00000460483 LCE4AQ5TA78 99 aa7.28□□□□□ -1.24
SMNDC1-203ENST00000460483 ORAOV1Q8WV07 137 aa7.28□□□□□ -1.24
SMNDC1-203ENST00000460483 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
SMNDC1-203ENST00000460483 VPS13DQ5THJ4 4388 aa7.27□□□□□ -1.25
SMNDC1-203ENST00000460483 C11orf86A6NJI1 115 aa7.27□□□□□ -1.25
SMNDC1-203ENST00000460483 C3orf79P0CE67 100 aa7.27□□□□□ -1.25
SMNDC1-203ENST00000460483 COX6A2Q02221 97 aa7.27□□□□□ -1.25
SMNDC1-203ENST00000460483 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
SMNDC1-203ENST00000460483 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
SMNDC1-203ENST00000460483 IGLV4-69A0A075B6H9 119 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 HSBP1L1C9JCN9 74 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 LECT2O14960 151 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 NDUFA1O15239 70 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 LINC01545Q5VT33 79 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 Q8IZM0 81 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 MAPKAPK5-AS1Q8N8E1 139 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 CAMK2N2Q96S95 79 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 LYSTQ99698 3801 aa7.26□□□□□ -1.25
SMNDC1-203ENST00000460483 LINC00587B1AMM8 73 aa7.25□□□□□ -1.25
SMNDC1-203ENST00000460483 ZNF22P17026 224 aaPredicted RBP7.25□□□□□ -1.25
SMNDC1-203ENST00000460483 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-203ENST00000460483 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms