RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 FAM30AQ9NZY2 134 aa14.08□□□□□ -0.16
SSNA1-202ENST00000459860 IGHV3-64A0A075B6Q5 118 aa14.07□□□□□ -0.16
SSNA1-202ENST00000459860 LINC01546A6NGU7 62 aa14.07□□□□□ -0.16
SSNA1-202ENST00000459860 ZNF561-AS1K7EIQ3 104 aa14.07□□□□□ -0.16
SSNA1-202ENST00000459860 C5orf38Q86SI9 138 aa14.07□□□□□ -0.16
SSNA1-202ENST00000459860 TIMM17AQ99595 171 aa14.07□□□□□ -0.16
SSNA1-202ENST00000459860 DNAH8Q96JB1 4490 aa14.06□□□□□ -0.16
SSNA1-202ENST00000459860 IGIPA6NJ69 53 aa14.06□□□□□ -0.16
SSNA1-202ENST00000459860 EPM2AB3EWF7 344 aa14.06□□□□□ -0.16
SSNA1-202ENST00000459860 HAMPP81172 84 aa14.06□□□□□ -0.16
SSNA1-202ENST00000459860 C18orf32Q8TCD1 76 aa14.05□□□□□ -0.16
SSNA1-202ENST00000459860 SCGB3A1Q96QR1 104 aa14.05□□□□□ -0.16
SSNA1-202ENST00000459860 ERASQ7Z444 233 aa14.04□□□□□ -0.16
SSNA1-202ENST00000459860 SLPIP03973 132 aa14.03□□□□□ -0.16
SSNA1-202ENST00000459860 RAB5BP61020 215 aa14.03□□□□□ -0.16
SSNA1-202ENST00000459860 AMELXQ99217 191 aa14.03□□□□□ -0.16
SSNA1-202ENST00000459860 MYCBP2O75592 4640 aa14.02□□□□□ -0.16
SSNA1-202ENST00000459860 IGHV3OR16-9A0A0B4J2B5 98 aa14.02□□□□□ -0.17
SSNA1-202ENST00000459860 PKIGQ9Y2B9 76 aa14.02□□□□□ -0.17
SSNA1-202ENST00000459860 LINC00614P0C842 121 aa14.01□□□□□ -0.17
SSNA1-202ENST00000459860 UBE2D1P51668 147 aa14.01□□□□□ -0.17
SSNA1-202ENST00000459860 LINC00242Q5T6M2 205 aa14.01□□□□□ -0.17
SSNA1-202ENST00000459860 OR10D4PQ8NGN7 298 aa14.01□□□□□ -0.17
SSNA1-202ENST00000459860 CARD19Q96LW7 228 aa14.01□□□□□ -0.17
SSNA1-202ENST00000459860 CHAC1Q9BUX1 264 aa14.01□□□□□ -0.17
SSNA1-202ENST00000459860 INAFM2P0DMQ5 153 aa14□□□□□ -0.17
SSNA1-202ENST00000459860 SEC11AP67812 179 aa14□□□□□ -0.17
SSNA1-202ENST00000459860 SDIM1Q6ZPB5 146 aa14□□□□□ -0.17
SSNA1-202ENST00000459860 LINC00173Q6ZV60 143 aa14□□□□□ -0.17
SSNA1-202ENST00000459860 SCXQ7RTU7 201 aa14□□□□□ -0.17
SSNA1-202ENST00000459860 LINC00526Q96FQ7 95 aa14□□□□□ -0.17
SSNA1-202ENST00000459860 IGLV4-69A0A075B6H9 119 aa13.99□□□□□ -0.17
SSNA1-202ENST00000459860 SMR3BP02814 79 aaPredicted RBP13.99□□□□□ -0.17
SSNA1-202ENST00000459860 SPAG11BQ08648 103 aa13.99□□□□□ -0.17
SSNA1-202ENST00000459860 SYCNQ0VAF6 134 aa13.99□□□□□ -0.17
SSNA1-202ENST00000459860 ZC2HC1BQ5TFG8 222 aa13.99□□□□□ -0.17
SSNA1-202ENST00000459860 ORAOV1Q8WV07 137 aa13.99□□□□□ -0.17
SSNA1-202ENST00000459860 CAMK2N2Q96S95 79 aa13.98□□□□□ -0.17
SSNA1-202ENST00000459860 FAM229AH3BQW9 127 aa13.97□□□□□ -0.17
SSNA1-202ENST00000459860 Q5VSD8 79 aa13.97□□□□□ -0.17
SSNA1-202ENST00000459860 C2orf48Q96LS8 159 aa13.97□□□□□ -0.17
SSNA1-202ENST00000459860 A0A087WZ39 114 aa13.96□□□□□ -0.17
SSNA1-202ENST00000459860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.96□□□□□ -0.17
SSNA1-202ENST00000459860 HBDP02042 147 aa13.96□□□□□ -0.17
SSNA1-202ENST00000459860 HERVK_113P63121 156 aa13.96□□□□□ -0.17
SSNA1-202ENST00000459860 COX6A2Q02221 97 aa13.95□□□□□ -0.18
SSNA1-202ENST00000459860 FAM19A3Q7Z5A8 133 aa13.95□□□□□ -0.18
SSNA1-202ENST00000459860 CIRBP-AS1Q8TBR5 109 aa13.95□□□□□ -0.18
SSNA1-202ENST00000459860 URB1-AS1Q96HZ7 61 aa13.95□□□□□ -0.18
SSNA1-202ENST00000459860 GEMIN7Q9H840 131 aaKnown RBP13.95□□□□□ -0.18
SSNA1-202ENST00000459860 LINC01561Q8N1V8 128 aa13.94□□□□□ -0.18
SSNA1-202ENST00000459860 DPH3Q96FX2 82 aa13.94□□□□□ -0.18
SSNA1-202ENST00000459860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.94□□□□□ -0.18
SSNA1-202ENST00000459860 F8WDY8 70 aa13.93□□□□□ -0.18
SSNA1-202ENST00000459860 DMBT1Q9UGM3 2413 aaPredicted RBP13.93□□□□□ -0.18
SSNA1-202ENST00000459860 TRGC2P03986 189 aa13.92□□□□□ -0.18
SSNA1-202ENST00000459860 PMVKQ15126 192 aa13.92□□□□□ -0.18
SSNA1-202ENST00000459860 Q6ZRU5 148 aa13.92□□□□□ -0.18
SSNA1-202ENST00000459860 CHCHD1Q96BP2 118 aaKnown RBP13.92□□□□□ -0.18
SSNA1-202ENST00000459860 A0A096LNJ9 63 aa13.91□□□□□ -0.18
SSNA1-202ENST00000459860 PMCHL1Q16048 86 aa13.91□□□□□ -0.18
SSNA1-202ENST00000459860 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
SSNA1-202ENST00000459860 PACRGQ96M98 296 aaPredicted RBP13.91□□□□□ -0.18
SSNA1-202ENST00000459860 IGKV2-24A0A0C4DH68 120 aa13.9□□□□□ -0.18
SSNA1-202ENST00000459860 A0A0J9YXV3 536 aa13.9□□□□□ -0.18
SSNA1-202ENST00000459860 NDUFA1O15239 70 aa13.9□□□□□ -0.18
SSNA1-202ENST00000459860 CHTF8P0CG12 524 aa13.9□□□□□ -0.18
SSNA1-202ENST00000459860 CIRBPQ14011 172 aaKnown RBP13.9□□□□□ -0.18
SSNA1-202ENST00000459860 LINC00528Q8N1L1 170 aa13.9□□□□□ -0.18
SSNA1-202ENST00000459860 COLCA2A8K830 154 aa13.89□□□□□ -0.19
SSNA1-202ENST00000459860 PANO1I0J062 215 aa13.89□□□□□ -0.19
SSNA1-202ENST00000459860 ATP5LO75964 103 aa13.89□□□□□ -0.19
SSNA1-202ENST00000459860 SPACA4Q8TDM5 124 aa13.89□□□□□ -0.19
SSNA1-202ENST00000459860 CST9LQ9H4G1 147 aa13.89□□□□□ -0.19
SSNA1-202ENST00000459860 LINC00474Q9P2X8 69 aa13.89□□□□□ -0.19
SSNA1-202ENST00000459860 LOC107984640A0A0U1RRK4 108 aa13.88□□□□□ -0.19
SSNA1-202ENST00000459860 TINCRA0A1B0GVN0 87 aa13.88□□□□□ -0.19
SSNA1-202ENST00000459860 PRSS2P07478 247 aa13.88□□□□□ -0.19
SSNA1-202ENST00000459860 NDUFA6P56556 154 aa13.88□□□□□ -0.19
SSNA1-202ENST00000459860 LINC00469Q8N7U9 141 aa13.88□□□□□ -0.19
SSNA1-202ENST00000459860 SRRM2Q9UQ35 2752 aaKnown RBP13.88□□□□□ -0.19
SSNA1-202ENST00000459860 MAJINQ3KP22 176 aa13.87□□□□□ -0.19
SSNA1-202ENST00000459860 PDZD11Q5EBL8 140 aa13.87□□□□□ -0.19
SSNA1-202ENST00000459860 MRPL35Q9NZE8 188 aaKnown RBP13.87□□□□□ -0.19
SSNA1-202ENST00000459860 CDKN2A-AS1Q9UH64 79 aa13.87□□□□□ -0.19
SSNA1-202ENST00000459860 A0A096LNI7 61 aa13.86□□□□□ -0.19
SSNA1-202ENST00000459860 HSBP1O75506 76 aa13.86□□□□□ -0.19
SSNA1-202ENST00000459860 PLA2G1BP04054 148 aaKnown RBP13.86□□□□□ -0.19
SSNA1-202ENST00000459860 RNF151Q2KHN1 245 aa13.86□□□□□ -0.19
SSNA1-202ENST00000459860 TOMM7Q9P0U1 55 aa13.86□□□□□ -0.19
SSNA1-202ENST00000459860 SCO1O75880 301 aa13.85□□□□□ -0.19
SSNA1-202ENST00000459860 A0A087WYN8 130 aa13.84□□□□□ -0.19
SSNA1-202ENST00000459860 RPL18AQ02543 176 aaKnown RBP13.83□□□□□ -0.2
SSNA1-202ENST00000459860 KIAA0087Q14695 138 aa13.83□□□□□ -0.2
SSNA1-202ENST00000459860 CKS1BP61024 79 aa13.82□□□□□ -0.2
SSNA1-202ENST00000459860 GAGE2BQ13066 116 aa13.82□□□□□ -0.2
SSNA1-202ENST00000459860 C6orf226Q5I0X4 101 aa13.82□□□□□ -0.2
SSNA1-202ENST00000459860 UNQ6190/PRO20217Q6UXQ8 127 aa13.82□□□□□ -0.2
SSNA1-202ENST00000459860 Q8IZM0 81 aa13.82□□□□□ -0.2
SSNA1-202ENST00000459860 STPG4Q8N801 248 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms