RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 NPSP0C0P6 89 aa13.33□□□□□ -0.28
VARS-218ENST00000459667 MALP21145 153 aa13.33□□□□□ -0.28
VARS-218ENST00000459667 TEX43Q6ZNM6 134 aa13.33□□□□□ -0.28
VARS-218ENST00000459667 LINC00528Q8N1L1 170 aa13.33□□□□□ -0.28
VARS-218ENST00000459667 LINC01549A6NIU2 74 aa13.32□□□□□ -0.28
VARS-218ENST00000459667 PAPPA-AS1Q5QFB9 102 aa13.32□□□□□ -0.28
VARS-218ENST00000459667 CBLN2Q8IUK8 224 aa13.32□□□□□ -0.28
VARS-218ENST00000459667 YPEL4Q96NS1 127 aa13.32□□□□□ -0.28
VARS-218ENST00000459667 C2orf88Q9BSF0 95 aa13.32□□□□□ -0.28
VARS-218ENST00000459667 VPS13BQ7Z7G8 4022 aa13.31□□□□□ -0.28
VARS-218ENST00000459667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.31□□□□□ -0.28
VARS-218ENST00000459667 LINC01546A6NGU7 62 aa13.3□□□□□ -0.28
VARS-218ENST00000459667 TOMM6Q96B49 74 aa13.3□□□□□ -0.28
VARS-218ENST00000459667 VCX2Q9H322 139 aa13.3□□□□□ -0.28
VARS-218ENST00000459667 PANO1I0J062 215 aa13.29□□□□□ -0.28
VARS-218ENST00000459667 APOMO95445 188 aa13.29□□□□□ -0.28
VARS-218ENST00000459667 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
VARS-218ENST00000459667 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
VARS-218ENST00000459667 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
VARS-218ENST00000459667 ZNF561-AS1K7EIQ3 104 aa13.28□□□□□ -0.28
VARS-218ENST00000459667 INAFM2P0DMQ5 153 aa13.28□□□□□ -0.28
VARS-218ENST00000459667 C5orf38Q86SI9 138 aa13.28□□□□□ -0.28
VARS-218ENST00000459667 C18orf32Q8TCD1 76 aa13.28□□□□□ -0.28
VARS-218ENST00000459667 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
VARS-218ENST00000459667 PLA2G1BP04054 148 aaKnown RBP13.27□□□□□ -0.29
VARS-218ENST00000459667 RAB5BP61020 215 aa13.27□□□□□ -0.29
VARS-218ENST00000459667 CIRBPQ14011 172 aaKnown RBP13.26□□□□□ -0.29
VARS-218ENST00000459667 ERASQ7Z444 233 aa13.26□□□□□ -0.29
VARS-218ENST00000459667 CARD19Q96LW7 228 aa13.26□□□□□ -0.29
VARS-218ENST00000459667 CHTF8P0CG12 524 aa13.25□□□□□ -0.29
VARS-218ENST00000459667 COX6A2Q02221 97 aa13.25□□□□□ -0.29
VARS-218ENST00000459667 AMELXQ99217 191 aa13.25□□□□□ -0.29
VARS-218ENST00000459667 LINC00614P0C842 121 aa13.24□□□□□ -0.29
VARS-218ENST00000459667 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
VARS-218ENST00000459667 IGHV3OR16-9A0A0B4J2B5 98 aa13.23□□□□□ -0.29
VARS-218ENST00000459667 UBE2D1P51668 147 aa13.23□□□□□ -0.29
VARS-218ENST00000459667 SYCNQ0VAF6 134 aa13.23□□□□□ -0.29
VARS-218ENST00000459667 SPACA4Q8TDM5 124 aa13.23□□□□□ -0.29
VARS-218ENST00000459667 SEC11AP67812 179 aa13.22□□□□□ -0.29
VARS-218ENST00000459667 LINC00242Q5T6M2 205 aa13.22□□□□□ -0.29
VARS-218ENST00000459667 LINC00173Q6ZV60 143 aa13.22□□□□□ -0.29
VARS-218ENST00000459667 DPH3Q96FX2 82 aa13.22□□□□□ -0.29
VARS-218ENST00000459667 PKIGQ9Y2B9 76 aa13.22□□□□□ -0.29
VARS-218ENST00000459667 SPAG11BQ08648 103 aa13.21□□□□□ -0.29
VARS-218ENST00000459667 OR10D4PQ8NGN7 298 aa13.21□□□□□ -0.29
VARS-218ENST00000459667 IGKV2-24A0A0C4DH68 120 aa13.2□□□□□ -0.3
VARS-218ENST00000459667 ZC2HC1BQ5TFG8 222 aa13.2□□□□□ -0.3
VARS-218ENST00000459667 CAMK2N2Q96S95 79 aa13.2□□□□□ -0.3
VARS-218ENST00000459667 SRRM2Q9UQ35 2752 aaKnown RBP13.2□□□□□ -0.3
VARS-218ENST00000459667 A0A087WYN8 130 aa13.19□□□□□ -0.3
VARS-218ENST00000459667 Q6ZRU5 148 aa13.19□□□□□ -0.3
VARS-218ENST00000459667 ORAOV1Q8WV07 137 aa13.19□□□□□ -0.3
VARS-218ENST00000459667 C2orf48Q96LS8 159 aa13.19□□□□□ -0.3
VARS-218ENST00000459667 A0A087WZ39 114 aa13.18□□□□□ -0.3
VARS-218ENST00000459667 A0A096LNI7 61 aa13.18□□□□□ -0.3
VARS-218ENST00000459667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.18□□□□□ -0.3
VARS-218ENST00000459667 HBDP02042 147 aa13.18□□□□□ -0.3
VARS-218ENST00000459667 MAJINQ3KP22 176 aa13.18□□□□□ -0.3
VARS-218ENST00000459667 TRGC2P03986 189 aa13.17□□□□□ -0.3
VARS-218ENST00000459667 HERVK_113P63121 156 aa13.17□□□□□ -0.3
VARS-218ENST00000459667 FAM19A3Q7Z5A8 133 aa13.17□□□□□ -0.3
VARS-218ENST00000459667 LINC01561Q8N1V8 128 aa13.17□□□□□ -0.3
VARS-218ENST00000459667 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
VARS-218ENST00000459667 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
VARS-218ENST00000459667 F8WDY8 70 aa13.16□□□□□ -0.3
VARS-218ENST00000459667 CHCHD1Q96BP2 118 aaKnown RBP13.16□□□□□ -0.3
VARS-218ENST00000459667 KRTAP10-4P60372 401 aaPredicted RBP13.15□□□□□ -0.3
VARS-218ENST00000459667 PMVKQ15126 192 aa13.15□□□□□ -0.3
VARS-218ENST00000459667 PLAC8Q9NZF1 115 aa13.15□□□□□ -0.3
VARS-218ENST00000459667 COLCA2A8K830 154 aa13.14□□□□□ -0.31
VARS-218ENST00000459667 RPL37AP61513 92 aaKnown RBP13.14□□□□□ -0.31
VARS-218ENST00000459667 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
VARS-218ENST00000459667 CST9LQ9H4G1 147 aa13.14□□□□□ -0.31
VARS-218ENST00000459667 LINC00474Q9P2X8 69 aa13.14□□□□□ -0.31
VARS-218ENST00000459667 A0A096LNJ9 63 aa13.13□□□□□ -0.31
VARS-218ENST00000459667 LOC107984640A0A0U1RRK4 108 aa13.13□□□□□ -0.31
VARS-218ENST00000459667 ATP5LO75964 103 aa13.13□□□□□ -0.31
VARS-218ENST00000459667 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
VARS-218ENST00000459667 FLG2Q5D862 2391 aaPredicted RBP13.12□□□□□ -0.31
VARS-218ENST00000459667 A0A0J9YXV3 536 aa13.12□□□□□ -0.31
VARS-218ENST00000459667 STPG4Q8N801 248 aa13.12□□□□□ -0.31
VARS-218ENST00000459667 PACRGQ96M98 296 aaPredicted RBP13.12□□□□□ -0.31
VARS-218ENST00000459667 TINCRA0A1B0GVN0 87 aa13.11□□□□□ -0.31
VARS-218ENST00000459667 NDUFA1O15239 70 aa13.11□□□□□ -0.31
VARS-218ENST00000459667 NDUFA6P56556 154 aa13.11□□□□□ -0.31
VARS-218ENST00000459667 PRSS2P07478 247 aa13.1□□□□□ -0.31
VARS-218ENST00000459667 PTTG1IPP53801 180 aa13.1□□□□□ -0.31
VARS-218ENST00000459667 GAGE2BQ13066 116 aa13.1□□□□□ -0.31
VARS-218ENST00000459667 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
VARS-218ENST00000459667 LINC00469Q8N7U9 141 aa13.1□□□□□ -0.31
VARS-218ENST00000459667 MRPL35Q9NZE8 188 aaKnown RBP13.1□□□□□ -0.31
VARS-218ENST00000459667 HSBP1O75506 76 aa13.09□□□□□ -0.31
VARS-218ENST00000459667 SCO1O75880 301 aa13.09□□□□□ -0.31
VARS-218ENST00000459667 RNF151Q2KHN1 245 aa13.09□□□□□ -0.31
VARS-218ENST00000459667 CDKN2A-AS1Q9UH64 79 aa13.09□□□□□ -0.31
VARS-218ENST00000459667 RPL18AQ02543 176 aaKnown RBP13.08□□□□□ -0.32
VARS-218ENST00000459667 KIAA0087Q14695 138 aa13.07□□□□□ -0.32
VARS-218ENST00000459667 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
VARS-218ENST00000459667 UNQ6190/PRO20217Q6UXQ8 127 aa13.07□□□□□ -0.32
VARS-218ENST00000459667 MYCBP2O75592 4640 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms