RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 IGHV3-73A0A0B4J1V6 119 aa6.15□□□□□ -1.43
VPS50-208ENST00000458707 A8MZ25 164 aa6.15□□□□□ -1.43
VPS50-208ENST00000458707 SYNJ2BPP57105 145 aa6.15□□□□□ -1.43
VPS50-208ENST00000458707 Q6ZSN1 163 aa6.15□□□□□ -1.43
VPS50-208ENST00000458707 Q6ZSV7 163 aa6.15□□□□□ -1.43
VPS50-208ENST00000458707 CCL19Q99731 98 aa6.15□□□□□ -1.43
VPS50-208ENST00000458707 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.43
VPS50-208ENST00000458707 KLK5Q9Y337 293 aaPredicted RBP6.15□□□□□ -1.43
VPS50-208ENST00000458707 IGHV3-53P01767 116 aa6.14□□□□□ -1.43
VPS50-208ENST00000458707 FAM19A3Q7Z5A8 133 aa6.14□□□□□ -1.43
VPS50-208ENST00000458707 Q9UF83 564 aa6.14□□□□□ -1.43
VPS50-208ENST00000458707 CSPG4Q6UVK1 2322 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.13□□□□□ -1.43
VPS50-208ENST00000458707 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 IGKV2-29A2NJV5 120 aaPredicted RBP6.13□□□□□ -1.43
VPS50-208ENST00000458707 B4DSR2 109 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 IGHV4-59P01825 116 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 HOXD3P31249 432 aaPredicted RBP6.13□□□□□ -1.43
VPS50-208ENST00000458707 BEAN1Q3B7T3 259 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 CDKN2A-AS1Q9UH64 79 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 CRYBG3Q68DQ2 2970 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 POLQO75417 2590 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 RBMY1BA6NDE4 496 aaKnown RBP6.13□□□□□ -1.43
VPS50-208ENST00000458707 RBMY1EA6NEQ0 496 aaKnown RBP6.13□□□□□ -1.43
VPS50-208ENST00000458707 KNCNA6PVL3 124 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 RBMY1DP0C7P1 496 aaKnown RBP6.13□□□□□ -1.43
VPS50-208ENST00000458707 CXCL5P42830 114 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 NPC2P61916 151 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 CIRBPQ14011 172 aaKnown RBP6.13□□□□□ -1.43
VPS50-208ENST00000458707 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 C11orf72Q8NBR9 251 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 UBE2E2Q96LR5 201 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
VPS50-208ENST00000458707 NDUFC2-KCTD14E9PQ53 114 aa6.12□□□□□ -1.43
VPS50-208ENST00000458707 ACYP1P07311 99 aa6.12□□□□□ -1.43
VPS50-208ENST00000458707 PFN2P35080 140 aa6.12□□□□□ -1.43
VPS50-208ENST00000458707 DEFB112Q30KQ8 113 aa6.12□□□□□ -1.43
VPS50-208ENST00000458707 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.12□□□□□ -1.43
VPS50-208ENST00000458707 LINC00308Q8TCZ7 52 aa6.12□□□□□ -1.43
VPS50-208ENST00000458707 COX7A2LO14548 114 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 DEFB131AP59861 70 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 HIST1H4AP62805 103 aaKnown RBP6.11□□□□□ -1.43
VPS50-208ENST00000458707 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 PKIGQ9Y2B9 76 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 IGHV3OR16-12A0A075B7B8 117 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 HTN1P15515 57 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 COX6A2Q02221 97 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 DAND5Q8N907 189 aa6.11□□□□□ -1.43
VPS50-208ENST00000458707 TRAV13-1A0A0B4J241 112 aa6.1□□□□□ -1.43
VPS50-208ENST00000458707 PRM2P04554 102 aa6.1□□□□□ -1.43
VPS50-208ENST00000458707 GNLYP22749 145 aa6.1□□□□□ -1.43
VPS50-208ENST00000458707 LINC00242Q5T6M2 205 aa6.1□□□□□ -1.43
VPS50-208ENST00000458707 SDIM1Q6ZPB5 146 aa6.1□□□□□ -1.43
VPS50-208ENST00000458707 C5orf38Q86SI9 138 aa6.1□□□□□ -1.43
VPS50-208ENST00000458707 SETD2Q9BYW2 2564 aaPredicted RBP6.09□□□□□ -1.43
VPS50-208ENST00000458707 IGHV3-38A0A0C4DH36 116 aa6.09□□□□□ -1.43
VPS50-208ENST00000458707 ATOX1O00244 68 aa6.09□□□□□ -1.43
VPS50-208ENST00000458707 Q9H8V8 135 aa6.09□□□□□ -1.43
VPS50-208ENST00000458707 ZNF702PQ9H963 129 aa6.09□□□□□ -1.43
VPS50-208ENST00000458707 CR1P17927 2039 aa6.09□□□□□ -1.43
VPS50-208ENST00000458707 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 FAM236CP0DP71 79 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 DSCR9P59020 149 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 HIST2H2BCQ6DN03 193 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 DGAT2L7PQ6IED9 249 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 SOSTDC1Q6X4U4 206 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.44
VPS50-208ENST00000458707 CELSR2Q9HCU4 2923 aa6.09□□□□□ -1.44
VPS50-208ENST00000458707 UPK3BQ9BT76 320 aa6.08□□□□□ -1.44
VPS50-208ENST00000458707 MAP6D1Q9H9H5 199 aa6.08□□□□□ -1.44
VPS50-208ENST00000458707 INSP01308 110 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 SLURP1P55000 103 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 FAM222AQ5U5X8 452 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 C1orf158Q8N1D5 194 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 Q8N2B8 174 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 LINC01356Q8N9X3 169 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 LRRK2Q5S007 2527 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 A0A096LNT2 108 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 Q6YL49 198 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 LINC00643Q86TS7 51 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 C22orf24Q9Y442 160 aa6.07□□□□□ -1.44
VPS50-208ENST00000458707 USP9YO00507 2555 aaPredicted RBP6.06□□□□□ -1.44
VPS50-208ENST00000458707 TRBV10-1A0A0K0K1A3 114 aa6.06□□□□□ -1.44
VPS50-208ENST00000458707 hADV29S1A0JD25 119 aa6.06□□□□□ -1.44
VPS50-208ENST00000458707 FSHBP01225 129 aa6.06□□□□□ -1.44
VPS50-208ENST00000458707 SMCR5Q8TEV8 140 aa6.06□□□□□ -1.44
VPS50-208ENST00000458707 PEMTQ9UBM1 199 aa6.06□□□□□ -1.44
VPS50-208ENST00000458707 NF1P21359 2839 aa6.06□□□□□ -1.44
VPS50-208ENST00000458707 NDUFC2O95298 119 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 PF4P02776 101 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 DAZ2Q13117 558 aaKnown RBP6.05□□□□□ -1.44
VPS50-208ENST00000458707 DAZ4Q86SG3 579 aaKnown RBP6.05□□□□□ -1.44
VPS50-208ENST00000458707 C16orf95Q9H693 158 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 DAZ3Q9NR90 486 aaKnown RBP6.05□□□□□ -1.44
VPS50-208ENST00000458707 BAALC-AS2P0C853 105 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 DEFB136Q30KP8 78 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms