RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 FAM19A3Q7Z5A8 133 aa13.51□□□□□ -0.25
FAM3A-217ENST00000457212 KRTAP10-2P60368 255 aa13.5□□□□□ -0.25
FAM3A-217ENST00000457212 FAM19A2Q8N3H0 131 aa13.5□□□□□ -0.25
FAM3A-217ENST00000457212 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
FAM3A-217ENST00000457212 HECTD4Q9Y4D8 3996 aa13.5□□□□□ -0.25
FAM3A-217ENST00000457212 IGHV3OR16-9A0A0B4J2B5 98 aa13.49□□□□□ -0.25
FAM3A-217ENST00000457212 IGHV1-58A0A0C4DH39 117 aa13.48□□□□□ -0.25
FAM3A-217ENST00000457212 NUPR1O60356 82 aa13.48□□□□□ -0.25
FAM3A-217ENST00000457212 MALP21145 153 aa13.48□□□□□ -0.25
FAM3A-217ENST00000457212 C15orf56Q8N910 161 aa13.47□□□□□ -0.25
FAM3A-217ENST00000457212 DNAH11Q96DT5 4516 aa13.47□□□□□ -0.25
FAM3A-217ENST00000457212 APOMO95445 188 aa13.46□□□□□ -0.25
FAM3A-217ENST00000457212 PRSS1P07477 247 aa13.46□□□□□ -0.25
FAM3A-217ENST00000457212 HERVK_113P63121 156 aa13.46□□□□□ -0.25
FAM3A-217ENST00000457212 COA6Q5JTJ3 125 aaKnown RBP13.46□□□□□ -0.25
FAM3A-217ENST00000457212 C5orf38Q86SI9 138 aa13.46□□□□□ -0.25
FAM3A-217ENST00000457212 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.25
FAM3A-217ENST00000457212 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.45□□□□□ -0.26
FAM3A-217ENST00000457212 IGLV5-52A0A0A0MRZ9 124 aa13.45□□□□□ -0.26
FAM3A-217ENST00000457212 hDV102S1A0JD36 115 aa13.45□□□□□ -0.26
FAM3A-217ENST00000457212 LEPROTL1O95214 131 aa13.45□□□□□ -0.26
FAM3A-217ENST00000457212 NDUFA6P56556 154 aa13.45□□□□□ -0.26
FAM3A-217ENST00000457212 COX6A2Q02221 97 aa13.45□□□□□ -0.26
FAM3A-217ENST00000457212 GEMIN7Q9H840 131 aaKnown RBP13.45□□□□□ -0.26
FAM3A-217ENST00000457212 A0A087WZ39 114 aa13.44□□□□□ -0.26
FAM3A-217ENST00000457212 GVQW2A0A096LPI5 108 aaPredicted RBP13.44□□□□□ -0.26
FAM3A-217ENST00000457212 A0A0J9YXV3 536 aa13.44□□□□□ -0.26
FAM3A-217ENST00000457212 LINC01561Q8N1V8 128 aa13.44□□□□□ -0.26
FAM3A-217ENST00000457212 HSPB8Q9UJY1 196 aa13.44□□□□□ -0.26
FAM3A-217ENST00000457212 TINCRA0A1B0GVN0 87 aa13.43□□□□□ -0.26
FAM3A-217ENST00000457212 C16orf90A8MZG2 172 aa13.43□□□□□ -0.26
FAM3A-217ENST00000457212 TRAV12-1A0A0B4J245 112 aa13.41□□□□□ -0.26
FAM3A-217ENST00000457212 HIGD2BQ4VC39 106 aa13.41□□□□□ -0.26
FAM3A-217ENST00000457212 PACRGQ96M98 296 aaPredicted RBP13.41□□□□□ -0.26
FAM3A-217ENST00000457212 IGHV3-64A0A075B6Q5 118 aa13.4□□□□□ -0.26
FAM3A-217ENST00000457212 FUSP35637 526 aaKnown RBP eCLIP13.4□□□□□ -0.26
FAM3A-217ENST00000457212 CNBPP62633 177 aaKnown RBP13.4□□□□□ -0.26
FAM3A-217ENST00000457212 OR10D4PQ8NGN7 298 aa13.4□□□□□ -0.26
FAM3A-217ENST00000457212 EPPK1P58107 5090 aaKnown RBP13.4□□□□□ -0.26
FAM3A-217ENST00000457212 IGLV5-45A0A087WSX0 123 aa13.39□□□□□ -0.27
FAM3A-217ENST00000457212 ZNF561-AS1K7EIQ3 104 aa13.39□□□□□ -0.27
FAM3A-217ENST00000457212 IGLC3P0DOY3 106 aa13.39□□□□□ -0.27
FAM3A-217ENST00000457212 FABP4P15090 132 aa13.39□□□□□ -0.27
FAM3A-217ENST00000457212 PKHD1P08F94 4074 aa13.39□□□□□ -0.27
FAM3A-217ENST00000457212 GCSHP23434 173 aa13.38□□□□□ -0.27
FAM3A-217ENST00000457212 LINC00469Q8N7U9 141 aa13.38□□□□□ -0.27
FAM3A-217ENST00000457212 CDKN2A-AS1Q9UH64 79 aa13.38□□□□□ -0.27
FAM3A-217ENST00000457212 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.37□□□□□ -0.27
FAM3A-217ENST00000457212 ORAOV1Q8WV07 137 aa13.37□□□□□ -0.27
FAM3A-217ENST00000457212 CHAC1Q9BUX1 264 aa13.37□□□□□ -0.27
FAM3A-217ENST00000457212 CHTOPQ9Y3Y2 248 aaKnown RBP13.37□□□□□ -0.27
FAM3A-217ENST00000457212 IGLV4-69A0A075B6H9 119 aa13.36□□□□□ -0.27
FAM3A-217ENST00000457212 SPAG11BQ08648 103 aa13.36□□□□□ -0.27
FAM3A-217ENST00000457212 C2orf48Q96LS8 159 aa13.35□□□□□ -0.27
FAM3A-217ENST00000457212 MAP1LC3CQ9BXW4 147 aa13.35□□□□□ -0.27
FAM3A-217ENST00000457212 F8VRH5 84 aa13.34□□□□□ -0.27
FAM3A-217ENST00000457212 F8WDY8 70 aa13.34□□□□□ -0.27
FAM3A-217ENST00000457212 H3BRM9 83 aa13.34□□□□□ -0.27
FAM3A-217ENST00000457212 SLPIP03973 132 aa13.34□□□□□ -0.27
FAM3A-217ENST00000457212 C9orf163Q8N9P6 203 aa13.34□□□□□ -0.27
FAM3A-217ENST00000457212 C11orf86A6NJI1 115 aa13.32□□□□□ -0.28
FAM3A-217ENST00000457212 LINC00526Q96FQ7 95 aa13.32□□□□□ -0.28
FAM3A-217ENST00000457212 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
FAM3A-217ENST00000457212 H0Y8G0 127 aa13.31□□□□□ -0.28
FAM3A-217ENST00000457212 S100A6P06703 90 aa13.31□□□□□ -0.28
FAM3A-217ENST00000457212 ZNF22P17026 224 aaPredicted RBP13.31□□□□□ -0.28
FAM3A-217ENST00000457212 KRTAP10-1P60331 282 aa13.31□□□□□ -0.28
FAM3A-217ENST00000457212 SYCNQ0VAF6 134 aa13.31□□□□□ -0.28
FAM3A-217ENST00000457212 ODF1Q14990 250 aa13.31□□□□□ -0.28
FAM3A-217ENST00000457212 CAMK2N2Q96S95 79 aa13.31□□□□□ -0.28
FAM3A-217ENST00000457212 DYNC1H1Q14204 4646 aaKnown RBP13.3□□□□□ -0.28
FAM3A-217ENST00000457212 DNAH5Q8TE73 4624 aa13.3□□□□□ -0.28
FAM3A-217ENST00000457212 SMIM1B2RUZ4 78 aa13.3□□□□□ -0.28
FAM3A-217ENST00000457212 KIAA0087Q14695 138 aa13.3□□□□□ -0.28
FAM3A-217ENST00000457212 CARD19Q96LW7 228 aa13.3□□□□□ -0.28
FAM3A-217ENST00000457212 PRSS2P07478 247 aa13.29□□□□□ -0.28
FAM3A-217ENST00000457212 Q8IZM0 81 aa13.29□□□□□ -0.28
FAM3A-217ENST00000457212 LINC01620Q4KN68 170 aa13.28□□□□□ -0.28
FAM3A-217ENST00000457212 TMEM170BQ5T4T1 132 aa13.28□□□□□ -0.28
FAM3A-217ENST00000457212 SYS1-DBNDD2H3BUS1 97 aa13.27□□□□□ -0.29
FAM3A-217ENST00000457212 NDUFA1O15239 70 aa13.27□□□□□ -0.29
FAM3A-217ENST00000457212 SPINK8P0C7L1 97 aa13.27□□□□□ -0.29
FAM3A-217ENST00000457212 PLNP26678 52 aa13.27□□□□□ -0.29
FAM3A-217ENST00000457212 Q6ZRU5 148 aa13.27□□□□□ -0.29
FAM3A-217ENST00000457212 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.29
FAM3A-217ENST00000457212 PKIGQ9Y2B9 76 aa13.27□□□□□ -0.29
FAM3A-217ENST00000457212 C6orf226Q5I0X4 101 aa13.26□□□□□ -0.29
FAM3A-217ENST00000457212 HIST3H2BBQ8N257 126 aa13.26□□□□□ -0.29
FAM3A-217ENST00000457212 S100A2P29034 98 aa13.25□□□□□ -0.29
FAM3A-217ENST00000457212 RNF151Q2KHN1 245 aa13.25□□□□□ -0.29
FAM3A-217ENST00000457212 PET117Q6UWS5 81 aa13.25□□□□□ -0.29
FAM3A-217ENST00000457212 SDIM1Q6ZPB5 146 aa13.25□□□□□ -0.29
FAM3A-217ENST00000457212 IGLV5-39A0A0G2JS06 123 aa13.24□□□□□ -0.29
FAM3A-217ENST00000457212 DPM2O94777 84 aa13.24□□□□□ -0.29
FAM3A-217ENST00000457212 CXCL5P42830 114 aa13.24□□□□□ -0.29
FAM3A-217ENST00000457212 CKS1BP61024 79 aa13.24□□□□□ -0.29
FAM3A-217ENST00000457212 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
FAM3A-217ENST00000457212 BIRC6Q9NR09 4857 aa13.24□□□□□ -0.29
FAM3A-217ENST00000457212 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
FAM3A-217ENST00000457212 TMEM223A0PJW6 202 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms