RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PAPPA-AS1Q5QFB9 102 aa14.87□□□□□ -0.03
CBX3-204ENST00000456948 TEX43Q6ZNM6 134 aa14.87□□□□□ -0.03
CBX3-204ENST00000456948 C5orf38Q86SI9 138 aa14.87□□□□□ -0.03
CBX3-204ENST00000456948 SYCNQ0VAF6 134 aa14.86□□□□□ -0.03
CBX3-204ENST00000456948 CARD19Q96LW7 228 aa14.86□□□□□ -0.03
CBX3-204ENST00000456948 TGIF2-C20orf24A0A0A6YYL0 155 aa14.85□□□□□ -0.03
CBX3-204ENST00000456948 COX6A2Q02221 97 aa14.85□□□□□ -0.03
CBX3-204ENST00000456948 FABP9Q0Z7S8 132 aa14.85□□□□□ -0.03
CBX3-204ENST00000456948 VCX2Q9H322 139 aa14.85□□□□□ -0.03
CBX3-204ENST00000456948 LINC00474Q9P2X8 69 aa14.85□□□□□ -0.03
CBX3-204ENST00000456948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.85□□□□□ -0.03
CBX3-204ENST00000456948 IGLV4-3A0A075B6K6 122 aa14.84□□□□□ -0.03
CBX3-204ENST00000456948 LINC01549A6NIU2 74 aa14.84□□□□□ -0.03
CBX3-204ENST00000456948 OR10D4PQ8NGN7 298 aa14.83□□□□□ -0.04
CBX3-204ENST00000456948 MRPL18Q9H0U6 180 aaKnown RBP14.83□□□□□ -0.04
CBX3-204ENST00000456948 VPS13BQ7Z7G8 4022 aa14.82□□□□□ -0.04
CBX3-204ENST00000456948 CIRBPQ14011 172 aaKnown RBP14.82□□□□□ -0.04
CBX3-204ENST00000456948 FAM104AQ969W3 186 aa14.82□□□□□ -0.04
CBX3-204ENST00000456948 LINC00526Q96FQ7 95 aa14.82□□□□□ -0.04
CBX3-204ENST00000456948 C2orf48Q96LS8 159 aa14.82□□□□□ -0.04
CBX3-204ENST00000456948 CAMK2N2Q96S95 79 aa14.82□□□□□ -0.04
CBX3-204ENST00000456948 IGLV4-69A0A075B6H9 119 aa14.81□□□□□ -0.04
CBX3-204ENST00000456948 IGHV3OR16-9A0A0B4J2B5 98 aa14.81□□□□□ -0.04
CBX3-204ENST00000456948 ALKBH7Q9BT30 221 aaPredicted RBP14.81□□□□□ -0.04
CBX3-204ENST00000456948 F8WDY8 70 aa14.8□□□□□ -0.04
CBX3-204ENST00000456948 SMCO4Q9NRQ5 59 aa14.8□□□□□ -0.04
CBX3-204ENST00000456948 SPAG11BQ08648 103 aa14.79□□□□□ -0.04
CBX3-204ENST00000456948 SPACA4Q8TDM5 124 aa14.79□□□□□ -0.04
CBX3-204ENST00000456948 SRRM2Q9UQ35 2752 aaKnown RBP14.79□□□□□ -0.04
CBX3-204ENST00000456948 IGKV2-24A0A0C4DH68 120 aa14.78□□□□□ -0.04
CBX3-204ENST00000456948 MAJINQ3KP22 176 aa14.78□□□□□ -0.04
CBX3-204ENST00000456948 FA2HQ7L5A8 372 aa14.78□□□□□ -0.04
CBX3-204ENST00000456948 ORAOV1Q8WV07 137 aa14.78□□□□□ -0.04
CBX3-204ENST00000456948 TOMM6Q96B49 74 aa14.78□□□□□ -0.04
CBX3-204ENST00000456948 TRAPPC1Q9Y5R8 145 aa14.78□□□□□ -0.04
CBX3-204ENST00000456948 A0A087WYN8 130 aa14.77□□□□□ -0.05
CBX3-204ENST00000456948 IGIPA6NJ69 53 aa14.77□□□□□ -0.05
CBX3-204ENST00000456948 PANO1I0J062 215 aa14.77□□□□□ -0.05
CBX3-204ENST00000456948 CHTF8P0CG12 524 aa14.77□□□□□ -0.05
CBX3-204ENST00000456948 SEC11AP67812 179 aa14.77□□□□□ -0.05
CBX3-204ENST00000456948 TIMM17AQ99595 171 aa14.77□□□□□ -0.05
CBX3-204ENST00000456948 UBE2D1P51668 147 aa14.76□□□□□ -0.05
CBX3-204ENST00000456948 RPL37AP61513 92 aaKnown RBP14.76□□□□□ -0.05
CBX3-204ENST00000456948 LINC00242Q5T6M2 205 aa14.76□□□□□ -0.05
CBX3-204ENST00000456948 SCGB3A1Q96QR1 104 aa14.76□□□□□ -0.05
CBX3-204ENST00000456948 AMELXQ99217 191 aa14.76□□□□□ -0.05
CBX3-204ENST00000456948 A0A087WZ39 114 aa14.75□□□□□ -0.05
CBX3-204ENST00000456948 LOC107984640A0A0U1RRK4 108 aa14.75□□□□□ -0.05
CBX3-204ENST00000456948 ERASQ7Z444 233 aa14.75□□□□□ -0.05
CBX3-204ENST00000456948 LINC01561Q8N1V8 128 aa14.74□□□□□ -0.05
CBX3-204ENST00000456948 PLAC8Q9NZF1 115 aa14.74□□□□□ -0.05
CBX3-204ENST00000456948 NDUFA1O15239 70 aa14.73□□□□□ -0.05
CBX3-204ENST00000456948 RNF151Q2KHN1 245 aa14.73□□□□□ -0.05
CBX3-204ENST00000456948 Q6ZRU5 148 aa14.73□□□□□ -0.05
CBX3-204ENST00000456948 C7orf33Q8WU49 177 aa14.73□□□□□ -0.05
CBX3-204ENST00000456948 LINC01546A6NGU7 62 aa14.72□□□□□ -0.05
CBX3-204ENST00000456948 STPG4Q8N801 248 aa14.72□□□□□ -0.05
CBX3-204ENST00000456948 A0A096LNI7 61 aa14.71□□□□□ -0.05
CBX3-204ENST00000456948 HERVK_113P63121 156 aa14.71□□□□□ -0.05
CBX3-204ENST00000456948 GEMIN7Q9H840 131 aaKnown RBP14.71□□□□□ -0.05
CBX3-204ENST00000456948 MRPL35Q9NZE8 188 aaKnown RBP14.7□□□□□ -0.06
CBX3-204ENST00000456948 RAB5BP61020 215 aa14.69□□□□□ -0.06
CBX3-204ENST00000456948 GAGE2BQ13066 116 aa14.69□□□□□ -0.06
CBX3-204ENST00000456948 LINC00173Q6ZV60 143 aa14.69□□□□□ -0.06
CBX3-204ENST00000456948 FLG2Q5D862 2391 aaPredicted RBP14.68□□□□□ -0.06
CBX3-204ENST00000456948 PRSS2P07478 247 aa14.68□□□□□ -0.06
CBX3-204ENST00000456948 PTTG1IPP53801 180 aa14.68□□□□□ -0.06
CBX3-204ENST00000456948 ZC2HC1BQ5TFG8 222 aa14.68□□□□□ -0.06
CBX3-204ENST00000456948 FAM19A3Q7Z5A8 133 aa14.68□□□□□ -0.06
CBX3-204ENST00000456948 PACRGQ96M98 296 aaPredicted RBP14.68□□□□□ -0.06
CBX3-204ENST00000456948 LINC00614P0C842 121 aa14.66□□□□□ -0.06
CBX3-204ENST00000456948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.65□□□□□ -0.06
CBX3-204ENST00000456948 RPL18AQ02543 176 aaKnown RBP14.65□□□□□ -0.06
CBX3-204ENST00000456948 C18orf32Q8TCD1 76 aa14.64□□□□□ -0.07
CBX3-204ENST00000456948 CKS1BP61024 79 aa14.62□□□□□ -0.07
CBX3-204ENST00000456948 PMVKQ15126 192 aa14.62□□□□□ -0.07
CBX3-204ENST00000456948 C6orf226Q5I0X4 101 aa14.62□□□□□ -0.07
CBX3-204ENST00000456948 TRBV30A0A0K0K1B3 111 aa14.61□□□□□ -0.07
CBX3-204ENST00000456948 KRTAP10-4P60372 401 aaPredicted RBP14.61□□□□□ -0.07
CBX3-204ENST00000456948 KIAA0087Q14695 138 aa14.61□□□□□ -0.07
CBX3-204ENST00000456948 UNQ6190/PRO20217Q6UXQ8 127 aa14.61□□□□□ -0.07
CBX3-204ENST00000456948 CST9LQ9H4G1 147 aa14.61□□□□□ -0.07
CBX3-204ENST00000456948 TOMM7Q9P0U1 55 aa14.61□□□□□ -0.07
CBX3-204ENST00000456948 DMBT1Q9UGM3 2413 aaPredicted RBP14.6□□□□□ -0.07
CBX3-204ENST00000456948 A0A0J9YXV3 536 aa14.6□□□□□ -0.07
CBX3-204ENST00000456948 TINCRA0A1B0GVN0 87 aa14.6□□□□□ -0.07
CBX3-204ENST00000456948 J3QL48 77 aa14.6□□□□□ -0.07
CBX3-204ENST00000456948 LINC00469Q8N7U9 141 aa14.6□□□□□ -0.07
CBX3-204ENST00000456948 CDKN2A-AS1Q9UH64 79 aa14.6□□□□□ -0.07
CBX3-204ENST00000456948 HBDP02042 147 aa14.59□□□□□ -0.07
CBX3-204ENST00000456948 TLX1NBP0CAT3 122 aa14.59□□□□□ -0.07
CBX3-204ENST00000456948 MYCBP2O75592 4640 aa14.59□□□□□ -0.07
CBX3-204ENST00000456948 Q8IZM0 81 aa14.58□□□□□ -0.08
CBX3-204ENST00000456948 NDUFA6P56556 154 aa14.57□□□□□ -0.08
CBX3-204ENST00000456948 C10orf25Q5T742 122 aa14.57□□□□□ -0.08
CBX3-204ENST00000456948 SLC7A5P1Q8MH63 180 aa14.57□□□□□ -0.08
CBX3-204ENST00000456948 C6orf48Q9UBA6 75 aa14.57□□□□□ -0.08
CBX3-204ENST00000456948 ATP5LO75964 103 aa14.56□□□□□ -0.08
CBX3-204ENST00000456948 YPEL4Q96NS1 127 aa14.56□□□□□ -0.08
CBX3-204ENST00000456948 HERC1Q15751 4861 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms