RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 Q9H8V8 135 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GIG44P09565 113 aaPredicted RBP8.86□□□□□ -0.99
LINC00959-201ENST00000456581 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE2EQ4V326 116 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 UBE2WQ96B02 151 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE2DQ9UEU5 116 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 TRGV1A0A0A0MS02 117 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 DGAT2L7PQ6IED9 249 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 SOSTDC1Q6X4U4 206 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 C19orf73Q9NVV2 129 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 BAHCC1Q9P281 2608 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 LINC00242Q5T6M2 205 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 Q6ZTI0 123 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 PKD1L1Q8TDX9 2849 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 IGKV3OR2-268A0A0C4DH90 116 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 TMEM262E9PQX1 116 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 NTM-AS1Q6ZSK4 140 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 CHCHD5Q9BSY4 110 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 MAST4O15021 2626 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 PIK3CD-AS1Q5SR53 167 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 GAGE12JA6NER3 117 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 PF4P02776 101 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 GAGE4Q13068 117 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 CFAP161Q6P656 301 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 LINC00308Q8TCZ7 52 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 LST1O00453 97 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 EDA2RQ9HAV5 297 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 BEAN1Q3B7T3 259 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 NOP10Q9NPE3 64 aaKnown RBP8.8□□□□□ -1
LINC00959-201ENST00000456581 CYSRT1A8MQ03 144 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 NDUFA1O15239 70 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 RS1O15537 224 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 COX6CP09669 75 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 FAM218AQ96MZ4 157 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 PRIMA1Q86XR5 153 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 SMCR5Q8TEV8 140 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 M0QXV9 152 aa8.78□□□□□ -1
LINC00959-201ENST00000456581 IFITM1P13164 125 aa8.78□□□□□ -1
LINC00959-201ENST00000456581 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
LINC00959-201ENST00000456581 FBN1P35555 2871 aaKnown RBP8.78□□□□□ -1
LINC00959-201ENST00000456581 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
LINC00959-201ENST00000456581 Q9HAA7 133 aa8.77□□□□□ -1.01
LINC00959-201ENST00000456581 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
LINC00959-201ENST00000456581 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 PLAC8L1A1L4L8 177 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE7O76087 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 IL17DQ8TAD2 202 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 FAM110AQ9BQ89 295 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 NOTCH1P46531 2555 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 IGLV5-39A0A0G2JS06 123 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 CMC4P56277 68 aaPredicted RBP8.76□□□□□ -1.01
LINC00959-201ENST00000456581 TIRAPP58753 221 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 TOMM7Q9P0U1 55 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 SHISA2Q6UWI4 295 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 SMIM20Q8N5G0 67 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 COL6A5A8TX70 2615 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 H3BT86 120 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 F5H768 121 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 K7EQD1 137 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
LINC00959-201ENST00000456581 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 HERVK_113P63121 156 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 Q6Q795 121 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 DNAJC30Q96LL9 226 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 C11orf68Q9H3H3 251 aaKnown RBP8.73□□□□□ -1.01
LINC00959-201ENST00000456581 CDC42SE2Q9NRR3 84 aa8.73□□□□□ -1.01
LINC00959-201ENST00000456581 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
LINC00959-201ENST00000456581 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
LINC00959-201ENST00000456581 TIMM17BO60830 172 aa8.72□□□□□ -1.01
LINC00959-201ENST00000456581 HERV-K104P63124 156 aa8.72□□□□□ -1.01
LINC00959-201ENST00000456581 DAZ2Q13117 558 aaKnown RBP8.72□□□□□ -1.01
LINC00959-201ENST00000456581 DAZ4Q86SG3 579 aaKnown RBP8.72□□□□□ -1.01
LINC00959-201ENST00000456581 DAZ3Q9NR90 486 aaKnown RBP8.72□□□□□ -1.01
LINC00959-201ENST00000456581 LINC01600Q96MT4 127 aa8.72□□□□□ -1.01
LINC00959-201ENST00000456581 COX7A2LO14548 114 aa8.71□□□□□ -1.02
LINC00959-201ENST00000456581 C16orf74Q96GX8 76 aa8.71□□□□□ -1.02
LINC00959-201ENST00000456581 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.02
LINC00959-201ENST00000456581 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 UBE2L6O14933 153 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB4AO15263 64 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 ATP5G1P05496 136 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB130BP0DP73 79 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB130AP0DP74 79 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms