RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PKIGQ9Y2B9 76 aa11.59□□□□□ -0.55
PDLIM2-215ENST00000456545 MT-ND6P03923 174 aa11.58□□□□□ -0.56
PDLIM2-215ENST00000456545 SYCNQ0VAF6 134 aa11.58□□□□□ -0.56
PDLIM2-215ENST00000456545 SVBPQ8N300 66 aa11.58□□□□□ -0.56
PDLIM2-215ENST00000456545 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
PDLIM2-215ENST00000456545 MRPL18Q9H0U6 180 aaKnown RBP11.58□□□□□ -0.56
PDLIM2-215ENST00000456545 VCX2Q9H322 139 aa11.58□□□□□ -0.56
PDLIM2-215ENST00000456545 DNAH8Q96JB1 4490 aa11.58□□□□□ -0.56
PDLIM2-215ENST00000456545 IGLV4-3A0A075B6K6 122 aa11.57□□□□□ -0.56
PDLIM2-215ENST00000456545 TGIF2-C20orf24A0A0A6YYL0 155 aa11.57□□□□□ -0.56
PDLIM2-215ENST00000456545 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
PDLIM2-215ENST00000456545 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
PDLIM2-215ENST00000456545 IGKV2-24A0A0C4DH68 120 aa11.56□□□□□ -0.56
PDLIM2-215ENST00000456545 PANO1I0J062 215 aa11.56□□□□□ -0.56
PDLIM2-215ENST00000456545 CHTF8P0CG12 524 aa11.56□□□□□ -0.56
PDLIM2-215ENST00000456545 CAMK2N2Q96S95 79 aa11.56□□□□□ -0.56
PDLIM2-215ENST00000456545 MAJINQ3KP22 176 aa11.55□□□□□ -0.56
PDLIM2-215ENST00000456545 PAPPA-AS1Q5QFB9 102 aa11.55□□□□□ -0.56
PDLIM2-215ENST00000456545 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
PDLIM2-215ENST00000456545 SPAG11BQ08648 103 aa11.54□□□□□ -0.56
PDLIM2-215ENST00000456545 ORAOV1Q8WV07 137 aa11.54□□□□□ -0.56
PDLIM2-215ENST00000456545 SMCO4Q9NRQ5 59 aa11.54□□□□□ -0.56
PDLIM2-215ENST00000456545 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
PDLIM2-215ENST00000456545 A0A087WYN8 130 aa11.53□□□□□ -0.56
PDLIM2-215ENST00000456545 IGHV3OR16-9A0A0B4J2B5 98 aa11.53□□□□□ -0.56
PDLIM2-215ENST00000456545 FA2HQ7L5A8 372 aa11.53□□□□□ -0.56
PDLIM2-215ENST00000456545 OR10D4PQ8NGN7 298 aa11.53□□□□□ -0.56
PDLIM2-215ENST00000456545 SPACA4Q8TDM5 124 aa11.53□□□□□ -0.56
PDLIM2-215ENST00000456545 C2orf48Q96LS8 159 aa11.53□□□□□ -0.56
PDLIM2-215ENST00000456545 NPSP0C0P6 89 aa11.52□□□□□ -0.57
PDLIM2-215ENST00000456545 RPL37AP61513 92 aaKnown RBP11.52□□□□□ -0.57
PDLIM2-215ENST00000456545 CIRBPQ14011 172 aaKnown RBP11.52□□□□□ -0.57
PDLIM2-215ENST00000456545 LINC00474Q9P2X8 69 aa11.52□□□□□ -0.57
PDLIM2-215ENST00000456545 IGIPA6NJ69 53 aa11.51□□□□□ -0.57
PDLIM2-215ENST00000456545 LINC00242Q5T6M2 205 aa11.51□□□□□ -0.57
PDLIM2-215ENST00000456545 ZC2HC1BQ5TFG8 222 aa11.51□□□□□ -0.57
PDLIM2-215ENST00000456545 Q6ZRU5 148 aa11.51□□□□□ -0.57
PDLIM2-215ENST00000456545 TOMM6Q96B49 74 aa11.51□□□□□ -0.57
PDLIM2-215ENST00000456545 SCGB3A1Q96QR1 104 aa11.51□□□□□ -0.57
PDLIM2-215ENST00000456545 FAT1Q14517 4588 aa11.5□□□□□ -0.57
PDLIM2-215ENST00000456545 LINC01549A6NIU2 74 aa11.5□□□□□ -0.57
PDLIM2-215ENST00000456545 UBE2D1P51668 147 aa11.5□□□□□ -0.57
PDLIM2-215ENST00000456545 A0A096LNI7 61 aa11.49□□□□□ -0.57
PDLIM2-215ENST00000456545 LOC107984640A0A0U1RRK4 108 aa11.49□□□□□ -0.57
PDLIM2-215ENST00000456545 STPG4Q8N801 248 aa11.49□□□□□ -0.57
PDLIM2-215ENST00000456545 AMELXQ99217 191 aa11.49□□□□□ -0.57
PDLIM2-215ENST00000456545 TIMM17AQ99595 171 aa11.49□□□□□ -0.57
PDLIM2-215ENST00000456545 A0A087WZ39 114 aa11.48□□□□□ -0.57
PDLIM2-215ENST00000456545 F8WDY8 70 aa11.48□□□□□ -0.57
PDLIM2-215ENST00000456545 SEC11AP67812 179 aa11.48□□□□□ -0.57
PDLIM2-215ENST00000456545 GAGE2BQ13066 116 aa11.48□□□□□ -0.57
PDLIM2-215ENST00000456545 ERASQ7Z444 233 aa11.48□□□□□ -0.57
PDLIM2-215ENST00000456545 NDUFA1O15239 70 aa11.47□□□□□ -0.57
PDLIM2-215ENST00000456545 C7orf33Q8WU49 177 aa11.47□□□□□ -0.57
PDLIM2-215ENST00000456545 PLAC8Q9NZF1 115 aa11.47□□□□□ -0.57
PDLIM2-215ENST00000456545 LINC00173Q6ZV60 143 aa11.46□□□□□ -0.57
PDLIM2-215ENST00000456545 GEMIN7Q9H840 131 aaKnown RBP11.46□□□□□ -0.57
PDLIM2-215ENST00000456545 RPL18AQ02543 176 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-215ENST00000456545 VPS13BQ7Z7G8 4022 aa11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 A0A0J9YXV3 536 aa11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 PRSS2P07478 247 aa11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 HERVK_113P63121 156 aa11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 LINC01561Q8N1V8 128 aa11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 PACRGQ96M98 296 aaPredicted RBP11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 SRRM2Q9UQ35 2752 aaKnown RBP11.44□□□□□ -0.58
PDLIM2-215ENST00000456545 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
PDLIM2-215ENST00000456545 MRPL35Q9NZE8 188 aaKnown RBP11.43□□□□□ -0.58
PDLIM2-215ENST00000456545 TOMM7Q9P0U1 55 aa11.43□□□□□ -0.58
PDLIM2-215ENST00000456545 LINC00614P0C842 121 aa11.42□□□□□ -0.58
PDLIM2-215ENST00000456545 RAB5BP61020 215 aa11.42□□□□□ -0.58
PDLIM2-215ENST00000456545 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
PDLIM2-215ENST00000456545 C18orf32Q8TCD1 76 aa11.42□□□□□ -0.58
PDLIM2-215ENST00000456545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.41□□□□□ -0.58
PDLIM2-215ENST00000456545 FAM19A3Q7Z5A8 133 aa11.41□□□□□ -0.58
PDLIM2-215ENST00000456545 SLC7A5P1Q8MH63 180 aa11.41□□□□□ -0.58
PDLIM2-215ENST00000456545 J3QL48 77 aa11.4□□□□□ -0.58
PDLIM2-215ENST00000456545 NDUFA6P56556 154 aa11.4□□□□□ -0.58
PDLIM2-215ENST00000456545 CKS1BP61024 79 aa11.4□□□□□ -0.58
PDLIM2-215ENST00000456545 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.58
PDLIM2-215ENST00000456545 KRTAP10-4P60372 401 aaPredicted RBP11.39□□□□□ -0.59
PDLIM2-215ENST00000456545 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
PDLIM2-215ENST00000456545 PMVKQ15126 192 aa11.39□□□□□ -0.59
PDLIM2-215ENST00000456545 C10orf25Q5T742 122 aa11.39□□□□□ -0.59
PDLIM2-215ENST00000456545 LINC00469Q8N7U9 141 aa11.39□□□□□ -0.59
PDLIM2-215ENST00000456545 CDKN2A-AS1Q9UH64 79 aa11.39□□□□□ -0.59
PDLIM2-215ENST00000456545 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
PDLIM2-215ENST00000456545 CST9LQ9H4G1 147 aa11.38□□□□□ -0.59
PDLIM2-215ENST00000456545 HBDP02042 147 aa11.37□□□□□ -0.59
PDLIM2-215ENST00000456545 C6orf48Q9UBA6 75 aa11.37□□□□□ -0.59
PDLIM2-215ENST00000456545 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
PDLIM2-215ENST00000456545 TINCRA0A1B0GVN0 87 aa11.36□□□□□ -0.59
PDLIM2-215ENST00000456545 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
PDLIM2-215ENST00000456545 FLG2Q5D862 2391 aaPredicted RBP11.35□□□□□ -0.59
PDLIM2-215ENST00000456545 PMCHL1Q16048 86 aa11.35□□□□□ -0.59
PDLIM2-215ENST00000456545 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
PDLIM2-215ENST00000456545 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
PDLIM2-215ENST00000456545 Q8IZM0 81 aa11.35□□□□□ -0.59
PDLIM2-215ENST00000456545 YPEL4Q96NS1 127 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms