RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 TIMM17BO60830 172 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 XCL1P47992 114 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 Q6ZSV7 163 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 APRG1Q8IVJ8 170 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 C1orf158Q8N1D5 194 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 ESM1Q9NQ30 184 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 XCL2Q9UBD3 114 aa5.55□□□□□ -1.52
HDAC9-218ENST00000456174 FASNP49327 2511 aaKnown RBP5.55□□□□□ -1.52
HDAC9-218ENST00000456174 IGHV4OR15-8A0A075B7B6 117 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 A0A087WVE0 104 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 A0A087WW49 117 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 RBMY1BA6NDE4 496 aaKnown RBP5.54□□□□□ -1.52
HDAC9-218ENST00000456174 RBMY1EA6NEQ0 496 aaKnown RBP5.54□□□□□ -1.52
HDAC9-218ENST00000456174 RBMY1DP0C7P1 496 aaKnown RBP5.54□□□□□ -1.52
HDAC9-218ENST00000456174 RBMY1A1P0DJD3 496 aaKnown RBP5.54□□□□□ -1.52
HDAC9-218ENST00000456174 RBMY1CP0DJD4 496 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 RBMY1FQ15415 496 aaKnown RBP5.54□□□□□ -1.52
HDAC9-218ENST00000456174 STHQ8IWL8 128 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 LINC00482Q8N8I6 264 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 HECTD1Q9ULT8 2610 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 AKAP9Q99996 3911 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 IGKV3-7A0A075B6H7 116 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 SOCS3O14543 225 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 BCE1O60756 84 aa5.54□□□□□ -1.52
HDAC9-218ENST00000456174 POLR2KP53803 58 aaKnown RBP5.54□□□□□ -1.52
HDAC9-218ENST00000456174 A0A087WWL8 130 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 MED14OSP0DP75 135 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 HOXD3P31249 432 aaPredicted RBP5.53□□□□□ -1.52
HDAC9-218ENST00000456174 RPL39P62891 51 aaKnown RBP5.53□□□□□ -1.52
HDAC9-218ENST00000456174 LYPD5Q6UWN5 251 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 C18orf65Q6ZTR6 163 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 SMR3AQ99954 134 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 DNAL4O96015 105 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 DEFB136Q30KP8 78 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 IL17DQ8TAD2 202 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 OBSCN-AS1Q96MR7 158 aa5.53□□□□□ -1.52
HDAC9-218ENST00000456174 MYO9AB2RTY4 2548 aa5.52□□□□□ -1.53
HDAC9-218ENST00000456174 CUBNO60494 3623 aa5.52□□□□□ -1.53
HDAC9-218ENST00000456174 VCYO14598 125 aa5.52□□□□□ -1.53
HDAC9-218ENST00000456174 RNASE1P07998 156 aaKnown RBP5.52□□□□□ -1.53
HDAC9-218ENST00000456174 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-218ENST00000456174 ATP5EP2Q5VTU8 51 aa5.52□□□□□ -1.53
HDAC9-218ENST00000456174 C20orf197Q8N268 126 aa5.52□□□□□ -1.53
HDAC9-218ENST00000456174 C4orf3Q8WVX3 66 aa5.52□□□□□ -1.53
HDAC9-218ENST00000456174 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
HDAC9-218ENST00000456174 LY6G6DO95868 133 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 SLURP1P55000 103 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 TRAV12-3A0A0B4J271 114 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 NXPH4O95158 308 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 MGPP08493 103 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 DEFB1P60022 68 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 HIST2H2BDQ6DRA6 164 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 C11orf44Q8N8P7 122 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 NDUFA12Q9UI09 145 aa5.51□□□□□ -1.53
HDAC9-218ENST00000456174 ANK3Q12955 4377 aaKnown RBP5.5□□□□□ -1.53
HDAC9-218ENST00000456174 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
HDAC9-218ENST00000456174 TRBV27A0A0K0K1C4 114 aa5.5□□□□□ -1.53
HDAC9-218ENST00000456174 F6UB75 175 aa5.5□□□□□ -1.53
HDAC9-218ENST00000456174 RPL28P46779 137 aaKnown RBP5.5□□□□□ -1.53
HDAC9-218ENST00000456174 LINC00315P59091 139 aa5.5□□□□□ -1.53
HDAC9-218ENST00000456174 HILS1P60008 231 aa5.5□□□□□ -1.53
HDAC9-218ENST00000456174 LENEPQ9Y5L5 61 aa5.5□□□□□ -1.53
HDAC9-218ENST00000456174 TRBV7-6A0A0J9YX20 115 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 TRBV6-5A0A0K0K1A5 114 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 CCKP06307 115 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 LINC01006Q8NI28 216 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 KIF25-AS1Q9Y6Z4 181 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 TRAV7A0A075B6U4 112 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 CD164Q04900 197 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 PRR15Q8IV56 129 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 LINC00474Q9P2X8 69 aa5.49□□□□□ -1.53
HDAC9-218ENST00000456174 K7EQG2 157 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 CD28P10747 220 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 SNRPD3P62318 126 aaKnown RBP5.48□□□□□ -1.53
HDAC9-218ENST00000456174 S100A7L2Q5SY68 101 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 PRR9Q5T870 116 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 Q6ZRU5 148 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 RNASE4P34096 147 aaKnown RBP5.48□□□□□ -1.53
HDAC9-218ENST00000456174 CIRBPQ14011 172 aaKnown RBP5.48□□□□□ -1.53
HDAC9-218ENST00000456174 ZFAND2AQ8N6M9 145 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 FAM218AQ96MZ4 157 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 OVOL2Q9BRP0 275 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 HIVEP2P31629 2446 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 MTORP42345 2549 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 NF1P21359 2839 aa5.48□□□□□ -1.53
HDAC9-218ENST00000456174 PHLDA3Q9Y5J5 127 aa5.47□□□□□ -1.53
HDAC9-218ENST00000456174 IGLV4-3A0A075B6K6 122 aa5.47□□□□□ -1.53
HDAC9-218ENST00000456174 NDUFC1O43677 76 aa5.47□□□□□ -1.53
HDAC9-218ENST00000456174 OPRPNQ99935 248 aaPredicted RBP5.47□□□□□ -1.53
HDAC9-218ENST00000456174 LAMTOR3Q9UHA4 124 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms