RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 FAM231DQ6ZW35 169 aa13.66□□□□□ -0.22
PTPRA-208ENST00000455631 CT83Q5H943 113 aa13.65□□□□□ -0.22
PTPRA-208ENST00000455631 TYMSOSQ8TAI1 123 aa13.65□□□□□ -0.22
PTPRA-208ENST00000455631 HIGD1CA8MV81 97 aa13.64□□□□□ -0.23
PTPRA-208ENST00000455631 C9orf129Q5T035 196 aaKnown RBP13.64□□□□□ -0.23
PTPRA-208ENST00000455631 NRACQ8N912 160 aa13.64□□□□□ -0.23
PTPRA-208ENST00000455631 RETNLBQ9BQ08 111 aa13.64□□□□□ -0.23
PTPRA-208ENST00000455631 PPP1R17O96001 155 aa13.63□□□□□ -0.23
PTPRA-208ENST00000455631 TAGLN2P37802 199 aaKnown RBP13.63□□□□□ -0.23
PTPRA-208ENST00000455631 CDIP1Q9H305 208 aa13.63□□□□□ -0.23
PTPRA-208ENST00000455631 NDUFC2-KCTD14E9PQ53 114 aa13.62□□□□□ -0.23
PTPRA-208ENST00000455631 RPL39P62891 51 aaKnown RBP13.62□□□□□ -0.23
PTPRA-208ENST00000455631 TRBV30A0A0K0K1B3 111 aa13.61□□□□□ -0.23
PTPRA-208ENST00000455631 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
PTPRA-208ENST00000455631 NUPR1O60356 82 aa13.61□□□□□ -0.23
PTPRA-208ENST00000455631 CRYGAP11844 174 aa13.61□□□□□ -0.23
PTPRA-208ENST00000455631 PPP1R2P9O14990 202 aa13.6□□□□□ -0.23
PTPRA-208ENST00000455631 TGIF2-C20orf24A0A0A6YYL0 155 aa13.59□□□□□ -0.23
PTPRA-208ENST00000455631 HBBP68871 147 aa13.59□□□□□ -0.23
PTPRA-208ENST00000455631 KIAA0087Q14695 138 aa13.59□□□□□ -0.23
PTPRA-208ENST00000455631 C2orf82Q6UX34 121 aa13.59□□□□□ -0.23
PTPRA-208ENST00000455631 FAM104AQ969W3 186 aa13.59□□□□□ -0.23
PTPRA-208ENST00000455631 CTDSP1Q9GZU7 261 aa13.59□□□□□ -0.23
PTPRA-208ENST00000455631 MUC17Q685J3 4493 aa13.58□□□□□ -0.24
PTPRA-208ENST00000455631 RGS21Q2M5E4 152 aa13.58□□□□□ -0.24
PTPRA-208ENST00000455631 PACRGQ96M98 296 aaPredicted RBP13.58□□□□□ -0.24
PTPRA-208ENST00000455631 SPANXA1Q9NS26 97 aa13.57□□□□□ -0.24
PTPRA-208ENST00000455631 RPL28P46779 137 aaKnown RBP13.55□□□□□ -0.24
PTPRA-208ENST00000455631 CEBPGP53567 150 aa13.55□□□□□ -0.24
PTPRA-208ENST00000455631 MRPS36P82909 103 aaKnown RBP13.55□□□□□ -0.24
PTPRA-208ENST00000455631 TPRXLQ17RH7 258 aa13.55□□□□□ -0.24
PTPRA-208ENST00000455631 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
PTPRA-208ENST00000455631 RIGQ13278 110 aa13.54□□□□□ -0.24
PTPRA-208ENST00000455631 TMEM250H0YL14 139 aa13.53□□□□□ -0.24
PTPRA-208ENST00000455631 TCAPO15273 167 aa13.52□□□□□ -0.25
PTPRA-208ENST00000455631 MRPL51Q4U2R6 128 aaKnown RBP13.52□□□□□ -0.25
PTPRA-208ENST00000455631 LBHQ53QV2 105 aaPredicted RBP13.52□□□□□ -0.25
PTPRA-208ENST00000455631 LINC00469Q8N7U9 141 aa13.52□□□□□ -0.25
PTPRA-208ENST00000455631 ANAPC11Q9NYG5 84 aa13.52□□□□□ -0.25
PTPRA-208ENST00000455631 C20orf78Q9BR46 151 aa13.51□□□□□ -0.25
PTPRA-208ENST00000455631 IGLV7-46A0A075B6I9 117 aa13.5□□□□□ -0.25
PTPRA-208ENST00000455631 BCE1O60756 84 aa13.5□□□□□ -0.25
PTPRA-208ENST00000455631 ZNF727A8MUV8 499 aa13.49□□□□□ -0.25
PTPRA-208ENST00000455631 LINC00304Q8N9R0 145 aa13.49□□□□□ -0.25
PTPRA-208ENST00000455631 XAGE1AQ9HD64 81 aa13.49□□□□□ -0.25
PTPRA-208ENST00000455631 FSIP2Q5CZC0 6907 aa13.48□□□□□ -0.25
PTPRA-208ENST00000455631 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
PTPRA-208ENST00000455631 KRTAP13-2Q52LG2 175 aa13.48□□□□□ -0.25
PTPRA-208ENST00000455631 LINC00242Q5T6M2 205 aa13.48□□□□□ -0.25
PTPRA-208ENST00000455631 FAM104BQ5XKR9 115 aa13.48□□□□□ -0.25
PTPRA-208ENST00000455631 LINC00173Q6ZV60 143 aa13.48□□□□□ -0.25
PTPRA-208ENST00000455631 LINC01551Q86U37 167 aa13.48□□□□□ -0.25
PTPRA-208ENST00000455631 SMIM2Q9BVW6 85 aa13.48□□□□□ -0.25
PTPRA-208ENST00000455631 LCE2DQ5TA82 110 aaPredicted RBP13.47□□□□□ -0.25
PTPRA-208ENST00000455631 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
PTPRA-208ENST00000455631 TRBV24-1A0A075B6N3 115 aa13.46□□□□□ -0.25
PTPRA-208ENST00000455631 CKS2P33552 79 aa13.46□□□□□ -0.25
PTPRA-208ENST00000455631 MRPL55Q7Z7F7 128 aaKnown RBP13.46□□□□□ -0.25
PTPRA-208ENST00000455631 SMIM7Q9BQ49 75 aa13.46□□□□□ -0.25
PTPRA-208ENST00000455631 CRCT1Q9UGL9 99 aa13.46□□□□□ -0.25
PTPRA-208ENST00000455631 LINC00862A6NCI5 91 aa13.45□□□□□ -0.26
PTPRA-208ENST00000455631 TNFRSF6BO95407 300 aa13.45□□□□□ -0.26
PTPRA-208ENST00000455631 IFI27P40305 119 aaPredicted RBP13.45□□□□□ -0.26
PTPRA-208ENST00000455631 PRSS2P07478 247 aa13.44□□□□□ -0.26
PTPRA-208ENST00000455631 BATF3Q9NR55 127 aa13.44□□□□□ -0.26
PTPRA-208ENST00000455631 CKS1BP61024 79 aa13.43□□□□□ -0.26
PTPRA-208ENST00000455631 TOMM7Q9P0U1 55 aa13.43□□□□□ -0.26
PTPRA-208ENST00000455631 TP73-AS1Q9UF72 201 aa13.43□□□□□ -0.26
PTPRA-208ENST00000455631 V9GYV3 84 aa13.43□□□□□ -0.26
PTPRA-208ENST00000455631 SLC51BQ86UW2 128 aa13.42□□□□□ -0.26
PTPRA-208ENST00000455631 NAT8BQ9UHF3 227 aa13.42□□□□□ -0.26
PTPRA-208ENST00000455631 IGLV4-3A0A075B6K6 122 aa13.4□□□□□ -0.26
PTPRA-208ENST00000455631 RPL37AP8A6NKH3 93 aa13.4□□□□□ -0.26
PTPRA-208ENST00000455631 LINC01547P58512 204 aaPredicted RBP13.4□□□□□ -0.26
PTPRA-208ENST00000455631 LINC01561Q8N1V8 128 aa13.4□□□□□ -0.26
PTPRA-208ENST00000455631 D6R8Y8 96 aa13.39□□□□□ -0.27
PTPRA-208ENST00000455631 FAM229BQ4G0N7 80 aa13.39□□□□□ -0.27
PTPRA-208ENST00000455631 TMEM141Q96I45 108 aa13.39□□□□□ -0.27
PTPRA-208ENST00000455631 PPDPFQ9H3Y8 114 aa13.39□□□□□ -0.27
PTPRA-208ENST00000455631 NPYP01303 97 aa13.38□□□□□ -0.27
PTPRA-208ENST00000455631 C6orf226Q5I0X4 101 aa13.38□□□□□ -0.27
PTPRA-208ENST00000455631 TEX43Q6ZNM6 134 aa13.38□□□□□ -0.27
PTPRA-208ENST00000455631 UBE2AP49459 152 aa13.37□□□□□ -0.27
PTPRA-208ENST00000455631 PYGO1Q9Y3Y4 419 aa13.37□□□□□ -0.27
PTPRA-208ENST00000455631 IGKV2D-26A0A0A0MRZ7 120 aa13.36□□□□□ -0.27
PTPRA-208ENST00000455631 RAB5AP20339 215 aa13.36□□□□□ -0.27
PTPRA-208ENST00000455631 Q6ZN92 141 aa13.36□□□□□ -0.27
PTPRA-208ENST00000455631 LINC00167Q96N53 147 aa13.36□□□□□ -0.27
PTPRA-208ENST00000455631 C2orf88Q9BSF0 95 aa13.36□□□□□ -0.27
PTPRA-208ENST00000455631 FAM74A3Q4VXF1 159 aa13.35□□□□□ -0.27
PTPRA-208ENST00000455631 Q8IZM0 81 aa13.35□□□□□ -0.27
PTPRA-208ENST00000455631 GAGE10A6NGK3 116 aa13.34□□□□□ -0.27
PTPRA-208ENST00000455631 ALKBH7Q9BT30 221 aaPredicted RBP13.34□□□□□ -0.27
PTPRA-208ENST00000455631 EIF5A2Q9GZV4 153 aaKnown RBP13.34□□□□□ -0.27
PTPRA-208ENST00000455631 BLOC1S1P78537 153 aa13.33□□□□□ -0.28
PTPRA-208ENST00000455631 KRTAP13-1Q8IUC0 172 aa13.33□□□□□ -0.28
PTPRA-208ENST00000455631 A0A1B0GW15 77 aa13.32□□□□□ -0.28
PTPRA-208ENST00000455631 ZC2HC1BQ5TFG8 222 aa13.32□□□□□ -0.28
PTPRA-208ENST00000455631 F8VRH5 84 aa13.31□□□□□ -0.28
PTPRA-208ENST00000455631 CTAG1AP78358 180 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms